BLASTX nr result
ID: Zingiber25_contig00001103
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00001103
(2290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A... 457 e-128
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu... 432 e-120
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5... 432 e-118
emb|CBI29694.3| unnamed protein product [Vitis vinifera] 421 e-117
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 398 e-111
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 398 e-111
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts... 393 e-108
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264... 384 e-107
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 383 e-106
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts... 382 e-105
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu... 387 e-104
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts... 378 e-104
gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 379 e-102
gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 379 e-102
gb|EMJ27362.1| hypothetical protein PRUPE_ppa015218mg [Prunus pe... 374 e-101
gb|EXB88206.1| hypothetical protein L484_011635 [Morus notabilis] 372 e-100
ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263... 370 1e-99
gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, pa... 365 5e-98
ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296... 364 1e-97
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm... 352 6e-97
>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
gi|548862693|gb|ERN20051.1| hypothetical protein
AMTR_s00071p00188270 [Amborella trichopoda]
Length = 599
Score = 457 bits (1175), Expect(2) = e-128
Identities = 274/557 (49%), Positives = 361/557 (64%), Gaps = 41/557 (7%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+VVRRLP +++ L+E+IDSRF+GRY+W FRPGKNS K+QRHSR YI+FKRPEDV+
Sbjct: 8 TKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDFKRPEDVL 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG+QFKA+VEYAPSQRVPK W K DGREGTI KDPEY+EFLE ++K
Sbjct: 68 EFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLEFLEFLAK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKR-L 1752
PAE+LPSAEIQLER+EAERAGA KE+ I+TPLMDFVR+KRAAK+G+ + NGK S+R
Sbjct: 128 PAENLPSAEIQLERREAERAGASKESLIVTPLMDFVRQKRAAKSGTLRSSANGKTSRRST 187
Query: 1751 GV-XXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
GV KRG +RRK++TS YVL+DS K KDK TY L+ R+++Q D S
Sbjct: 188 GVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQ-KLPDNSS 246
Query: 1574 NVPSTIEKEGVEDE-----------FGPGVESGKTRFVLLKGKERESSDAPRVLAQHQIV 1428
V + E ++DE G +ESGK + +LLKGK+RE+S A + Q Q V
Sbjct: 247 AVSALAGPEALDDESVGVADVTAATVGGTLESGKKKVLLLKGKDREASQASGSVVQQQTV 306
Query: 1427 ASPVK----GSPIFSSKKNQTSGRIIKSILT-KEGRMDFSFINTTHTEQQMQVANVE-DK 1266
+SP++ +P S++ + R++KSIL+ K+GR + + T TEQQ+Q ++E DK
Sbjct: 307 SSPIRNLSGSAPFRQSQRRDGNSRMVKSILSNKDGRQVPAHV-LTQTEQQLQGLSLEKDK 365
Query: 1265 HPSRPPSASLNSKDHIPCISSLASVSDDD-KKYTDGKAAVDNKHVSV-SSEKHERRTRNK 1092
P RP S L SKDH+ S+SD D KK D K ++ + V ++EK E+RTRNK
Sbjct: 366 RPPRPNSTRLASKDHLSGYLMPTSMSDSDPKKALDQKITGNDSYGLVPANEKQEKRTRNK 425
Query: 1091 DRPDRGVWAPLRRPDRSQSNDRIPPEVVQLSANSSEGLSVSQQ----------------- 963
DRPDR VW PLRR D + D Q++++S E LS +Q+
Sbjct: 426 DRPDRAVWTPLRRSDGIHTVDE-----SQMTSDSLEKLSNAQELKLGDDTEECDGLGSNA 480
Query: 962 --AVGKVREDEV-VIQTRNARGSNLLAAHETPLGYGERKPDLSYASRSEDIKVHRGGRVD 792
++GK R ++ +R+ RG++ ++ E L G+ K D S ASRS ++K GR
Sbjct: 481 SSSMGKSRTSDLGYHNSRSGRGAS-SSSSEHSLNQGDTKFDTSSASRSLEMKTQGTGRSS 539
Query: 791 YSGAENGSHRHVGRRGS 741
ENGSHRH GRR S
Sbjct: 540 TVSVENGSHRHAGRRSS 556
Score = 30.8 bits (68), Expect(2) = e-128
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -1
Query: 676 YNSHERQVWVQKSGSAS 626
Y +HE+Q+WVQKSG+ +
Sbjct: 583 YGAHEKQIWVQKSGTGT 599
>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
gi|550341819|gb|ERP62848.1| hypothetical protein
POPTR_0004s23450g [Populus trichocarpa]
Length = 520
Score = 432 bits (1110), Expect(2) = e-120
Identities = 247/522 (47%), Positives = 331/522 (63%), Gaps = 7/522 (1%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+VVR LP +S VEQID F+GRY+W +RPG NSQK Q +SRAYI+FKRPEDV+
Sbjct: 10 TKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPEDVI 69
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
+FAEFF GHIFVNEKG QFKA+VEY+PSQRVPK W K DGREGTISKDPEY+EFLEL++K
Sbjct: 70 DFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELIAK 129
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLER+EAERAGA K+API+TPLMDFVR+KR AKNG +++ NGK+S+R G
Sbjct: 130 PVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSRRAG 189
Query: 1748 VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSVNV 1569
KRGS++++++T+ YVL+D+ K KDK TY+ + +++DQ ++ +V +
Sbjct: 190 GSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSN--AVTL 247
Query: 1568 PSTIEKEGVEDE--FGPGVESGKTRFVLLKGKERESSDAPRVLAQHQIVASP---VKGSP 1404
S +EDE +SGK + +LLKGKE+E S ++Q Q ++S + S
Sbjct: 248 GSGSGTAVLEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIISST 307
Query: 1403 IFSSKKNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLNS 1230
S++ +TSGR+I+SI L K+ R S + H+E QMQ +N+E +K P RPP A L
Sbjct: 308 ALKSQRRETSGRMIRSILLNKDSRHIRS--SGVHSEPQMQTSNLEKEKRPPRPPHAQLGL 365
Query: 1229 KDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRP 1050
KD A+ + DDK V N +EK E+RTRNKDRPDRGVW PLRR
Sbjct: 366 KD--------ANGTPDDK-------VVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRS 410
Query: 1049 DRSQSNDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLG 870
D S ++D ++ ++ S++ + S Q
Sbjct: 411 DGSYASDE---SLLSSASQSTQSVFDSSQG-----------------------------N 438
Query: 869 YGERKPDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
+G+ K D S RS ++KV GR ++S +NGSH+H GRRG
Sbjct: 439 HGDVKVD-SLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRG 479
Score = 29.3 bits (64), Expect(2) = e-120
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1
Query: 676 YNSHERQVWVQKS 638
Y SHE+QVWVQKS
Sbjct: 505 YGSHEKQVWVQKS 517
>ref|XP_002328787.1| predicted protein [Populus trichocarpa]
gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family
protein [Populus trichocarpa] gi|550341820|gb|ERP62849.1|
Smg-4/UPF3 family protein [Populus trichocarpa]
Length = 527
Score = 432 bits (1110), Expect = e-118
Identities = 247/522 (47%), Positives = 331/522 (63%), Gaps = 7/522 (1%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+VVR LP +S VEQID F+GRY+W +RPG NSQK Q +SRAYI+FKRPEDV+
Sbjct: 10 TKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPEDVI 69
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
+FAEFF GHIFVNEKG QFKA+VEY+PSQRVPK W K DGREGTISKDPEY+EFLEL++K
Sbjct: 70 DFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELIAK 129
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLER+EAERAGA K+API+TPLMDFVR+KR AKNG +++ NGK+S+R G
Sbjct: 130 PVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSRRAG 189
Query: 1748 VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSVNV 1569
KRGS++++++T+ YVL+D+ K KDK TY+ + +++DQ ++ +V +
Sbjct: 190 GSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSN--AVTL 247
Query: 1568 PSTIEKEGVEDE--FGPGVESGKTRFVLLKGKERESSDAPRVLAQHQIVASP---VKGSP 1404
S +EDE +SGK + +LLKGKE+E S ++Q Q ++S + S
Sbjct: 248 GSGSGTAVLEDESVVSGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIISST 307
Query: 1403 IFSSKKNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLNS 1230
S++ +TSGR+I+SI L K+ R S + H+E QMQ +N+E +K P RPP A L
Sbjct: 308 ALKSQRRETSGRMIRSILLNKDSRHIRS--SGVHSEPQMQTSNLEKEKRPPRPPHAQLGL 365
Query: 1229 KDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRP 1050
KD A+ + DDK V N +EK E+RTRNKDRPDRGVW PLRR
Sbjct: 366 KD--------ANGTPDDK-------VVGNDLHGFPNEKQEKRTRNKDRPDRGVWTPLRRS 410
Query: 1049 DRSQSNDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLG 870
D S ++D ++ ++ S++ + S Q
Sbjct: 411 DGSYASDE---SLLSSASQSTQSVFDSSQG-----------------------------N 438
Query: 869 YGERKPDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
+G+ K D S RS ++KV GR ++S +NGSH+H GRRG
Sbjct: 439 HGDVKVD-SLNLRSGEVKVLGSGRGNHSSLDNGSHKHFGRRG 479
>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 421 bits (1083), Expect(2) = e-117
Identities = 255/530 (48%), Positives = 336/530 (63%), Gaps = 11/530 (2%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+VVR LP ++S +EQID+ F GRY FRPGKNSQK Q +SRAY++FKRPEDV+
Sbjct: 8 TKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDFKRPEDVI 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK +VEYAPSQR+PK W K DGREGTI KDPEYMEF+EL++K
Sbjct: 68 EFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYMEFVELLAK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRL- 1752
P E+LPSAEIQLER+EAERAGA+K+ PI+TPLMDFVR+KRAAK S++ NGK+S+R
Sbjct: 128 PVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNGKLSRRAS 187
Query: 1751 -GVXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
+KRGS++R+++T+ YVL+D+ K KDK T+IL+ +++DQ+ SDKSV
Sbjct: 188 GSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL-LSDKSV 246
Query: 1574 NVPSTIEKEGVEDEFG--PGVESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVK---- 1413
N+ + E +E+E G V++GK + +LLKGKERE S +L Q+ V SPVK
Sbjct: 247 NLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISH--HLLQQN--VTSPVKNILG 302
Query: 1412 GSPIFSSKKNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSAS 1239
+ +++ + SGRII+SI L K+ R S + TEQQ Q +N+E +K P RPP
Sbjct: 303 ANAPKQNQRREGSGRIIRSILLNKDARQSQS--SMFQTEQQSQASNLEKEKRPPRPPHIQ 360
Query: 1238 LNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPL 1059
L SK+ + + DDK V N S SEK ++RTRNKDRPDRGVW PL
Sbjct: 361 LASKE--------TNGAQDDK-------VVGNDVHSFVSEKQDKRTRNKDRPDRGVWTPL 405
Query: 1058 RRPDRSQSNDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHET 879
RR D S ++D LS+++S+ S +
Sbjct: 406 RRSDGSHASDE------SLSSSASQPTS-----------------------------SDF 430
Query: 878 PLG-YGERKPDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRGSLRS 732
P G +GE + D+S A RS ++K GR +S +NGSH+H GRRG S
Sbjct: 431 PEGSHGEMRSDMSNA-RSGEVKALGSGRGGHSALDNGSHKHSGRRGPTHS 479
Score = 30.8 bits (68), Expect(2) = e-117
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1
Query: 676 YNSHERQVWVQKSGS 632
Y SHE+QVWVQKS S
Sbjct: 503 YGSHEKQVWVQKSSS 517
>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
gi|557533707|gb|ESR44825.1| hypothetical protein
CICLE_v10000901mg [Citrus clementina]
Length = 514
Score = 398 bits (1023), Expect(2) = e-111
Identities = 248/523 (47%), Positives = 315/523 (60%), Gaps = 8/523 (1%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+VVR LP +++ EQID F GRY+W FR GK SQK Q +RAY++FK+PEDV+
Sbjct: 8 TKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDFKKPEDVL 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK +VEYAPSQRVPK W K DGREGT+ KDPEY+EFLE +SK
Sbjct: 68 EFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLEFLEFISK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLER+EAERAGA KEA I+TPLMDFVR+KRAAK G ++L NGK+S+R
Sbjct: 128 PVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNGKLSRRAS 187
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
+KRGSD++K +T+ YVL+D+ K KDK TYIL+ +++DQ DK V
Sbjct: 188 GSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQ--DFDKPV 245
Query: 1574 NVPSTIEKEGVEDEFGPGVES--GKTRFVLLKGKERESSDAPRVLAQHQI--VASPVKGS 1407
+ S E V +E G S GK + +LLKGKERE S ++ Q V + +
Sbjct: 246 SSSSATGSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSASVKTIISSP 305
Query: 1406 PIFSSKKNQTSGRIIKSIL-TKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLN 1233
+ +++ + SGRII+ IL K+ R + + + H+EQQ ++N+E DK P RP L
Sbjct: 306 ALKQNQRRENSGRIIRGILLNKDARQNQA--SGLHSEQQ--ISNLEKDKRPPRPSHVQLV 361
Query: 1232 SKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRR 1053
KD VSDD K V++ H SEK ERRTRNKDRPDR W LRR
Sbjct: 362 MKD-------TNGVSDD-------KVIVNDLH----SEKQERRTRNKDRPDRAAWT-LRR 402
Query: 1052 PDRSQSNDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPL 873
D S +D S S SQ ++ V E NL
Sbjct: 403 SDGSYQSDE------------SLSSSASQLSLSAVDSSE----------GNL-------- 432
Query: 872 GYGERKPDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
G+ K DLS RS ++K GGR +S +NGSHRH+GRRG
Sbjct: 433 --GDGKFDLSNM-RSGEVKAVGGGRSSHSSVDNGSHRHIGRRG 472
Score = 32.3 bits (72), Expect(2) = e-111
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 676 YNSHERQVWVQKSGSAS 626
Y SHE+QVWVQKS S S
Sbjct: 498 YGSHEKQVWVQKSSSGS 514
>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
sinensis]
Length = 514
Score = 398 bits (1022), Expect(2) = e-111
Identities = 248/523 (47%), Positives = 315/523 (60%), Gaps = 8/523 (1%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+VVR LP +++ EQID F GRY+W FR GK SQK Q +RAY++FK+PEDV+
Sbjct: 8 TKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDFKKPEDVL 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK +VEYAPSQRVPK W K DGREGT+ KDPEY+EFLE +SK
Sbjct: 68 EFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLEFLEFISK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLER+EAERAGA KEA I+TPLMDFVR+KRAAK G ++L NGK+S+R
Sbjct: 128 PVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNGKLSRRAS 187
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
+KRGSD++K +T+ YVL+D+ K KDK TYIL+ +++DQ DK V
Sbjct: 188 GSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQ--DFDKPV 245
Query: 1574 NVPSTIEKEGVEDEFGPGVES--GKTRFVLLKGKERESSDAPRVLAQHQI--VASPVKGS 1407
+ S E V +E G S GK + +LLKGKERE S ++ Q V + +
Sbjct: 246 SSSSATGSEVVLEESGVPANSDGGKKKVLLLKGKEREISQVSGSVSHQQSASVKNIISSP 305
Query: 1406 PIFSSKKNQTSGRIIKSIL-TKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLN 1233
+ +++ + SGRII+ IL K+ R + + + H+EQQ ++N+E DK P RP L
Sbjct: 306 ALKQNQRRENSGRIIRGILLNKDARQNQA--SGLHSEQQ--ISNLEKDKRPPRPSHVHLV 361
Query: 1232 SKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRR 1053
KD VSDD K V++ H SEK ERRTRNKDRPDR W LRR
Sbjct: 362 MKD-------TNGVSDD-------KVIVNDLH----SEKQERRTRNKDRPDRAAWT-LRR 402
Query: 1052 PDRSQSNDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPL 873
D S +D S S SQ ++ V E NL
Sbjct: 403 SDGSYQSDE------------SLSSSASQLSLSAVDSSE----------GNL-------- 432
Query: 872 GYGERKPDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
G+ K DLS RS ++K GGR +S +NGSHRH+GRRG
Sbjct: 433 --GDGKFDLSNM-RSGEVKAVGGGRSSHSSVDNGSHRHIGRRG 472
Score = 32.3 bits (72), Expect(2) = e-111
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 676 YNSHERQVWVQKSGSAS 626
Y SHE+QVWVQKS S S
Sbjct: 498 YGSHEKQVWVQKSSSGS 514
>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Solanum tuberosum]
gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X3 [Solanum
tuberosum]
Length = 508
Score = 393 bits (1009), Expect(2) = e-108
Identities = 242/523 (46%), Positives = 317/523 (60%), Gaps = 8/523 (1%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+V+R LP ++S + L+E +DSRFAGRY+WF FRP K S K Q +S+AYI+F+ EDV
Sbjct: 6 TKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDVT 65
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK +VEYAPSQRVPK WLK D REGTI KDP YMEFLE ++K
Sbjct: 66 EFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLAK 125
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLERKEAERAG+ K+API+TPLMD+VR+KRA K+G+++ NGK SK +G
Sbjct: 126 PVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSVG 185
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
++RGS++R +T+ YV +DS K KDK +YIL+ ++ DQ +
Sbjct: 186 GTSSRSPSSTASRRGSEKR-TSTTMYVQRDSSKAGNSKDK-SYILLPKRGDQQLSVKSGS 243
Query: 1574 NVPSTIEKEGVEDEFGPGV--ESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVKGSPI 1401
+ P + E + VE E G V +SGK + +LLKGKE+E + Q V+S +K SP
Sbjct: 244 SAPGS-EIDVVEGEIGRSVTADSGKKKILLLKGKEKEGPNVSGGSLAQQNVSSALKNSPS 302
Query: 1400 FSS-KKNQ---TSGRIIKSILTKEGRMDFSFINTTHTEQQMQVANVEDKHPSRPPSASLN 1233
S+ K+NQ SGRII+SIL K+ R + S + + +D P RPPS L
Sbjct: 303 LSALKQNQRQEASGRIIRSILLKDARQNQSAFQSDQIQD-------KDMRPPRPPSMQLF 355
Query: 1232 SKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRR 1053
KD S +++DK V N+ V EK ERR+RN+DRPDRGVWAPLRR
Sbjct: 356 QKD--------TSGANEDK-------VVGNEKHVVHIEKQERRSRNRDRPDRGVWAPLRR 400
Query: 1052 PDRSQSNDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPL 873
D SQ++ + + S G+ S Q VRE
Sbjct: 401 ADSSQAS----------NGSLSSGIPQSSQ----VRE-------------------FVEG 427
Query: 872 GYGERKPDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
G GE K DL A R + + GR +S A+NG+++H GRRG
Sbjct: 428 GQGELKNDLPIA-RGTEFRPIGSGRNSHSSADNGNYKHGGRRG 469
Score = 28.5 bits (62), Expect(2) = e-108
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 676 YNSHERQVWVQKSGSAS 626
Y+S E+QVWVQKS S S
Sbjct: 492 YSSLEKQVWVQKSSSGS 508
>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
lycopersicum]
Length = 485
Score = 384 bits (987), Expect(2) = e-107
Identities = 224/517 (43%), Positives = 308/517 (59%), Gaps = 2/517 (0%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
+K+V+R LP ++S + L++Q+DSRFAGRY+WFCF PGK+SQK Q +SRAYI FKRPEDV+
Sbjct: 8 SKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEFKRPEDVI 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK +VEYAPSQRVP+ W K DGREGTI KDPEY+EFLE +SK
Sbjct: 68 EFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPQHWSKKDGREGTILKDPEYLEFLEFISK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLERKEAERAG+ K+API+TPLMD++R+KRAAK+G++K NG+ ++R
Sbjct: 128 PIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANGRPTRRAS 187
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
+KR S++R+ +T+ YVL+DS K KDK TYIL +++DQ A
Sbjct: 188 GTSAGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQRAEKSGT 246
Query: 1574 NVPSTIEKEGVEDEFGPGVESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVKGSPIFS 1395
+ P ++ VE+E G + GK + +LLK KE+E+ +
Sbjct: 247 SAPGSV-ANAVEEETGGAADVGKKKILLLKEKEKENP----------------------N 283
Query: 1394 SKKNQTSGRIIKSILTKEGRMDFSFINTTHTEQQMQVANVEDKHPSRPPSASLNSKDHIP 1215
+++ + SGRII+SIL K+ R + QQ + +DK P RPPS L ++
Sbjct: 284 NQRREASGRIIRSILLKDARQN----QAPSASQQEKHRVDKDKKPPRPPSVQLFQRE--- 336
Query: 1214 CISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQS 1035
+ +++D + + HV V +EK E+RTR +DRPDRGVW PLRR D +
Sbjct: 337 -----TNGANED------RVLGADLHV-VHTEKQEKRTRIRDRPDRGVWTPLRRSDSLHA 384
Query: 1034 NDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERK 855
+D LS+++S+ V G GE K
Sbjct: 385 SDE------SLSSSASQSSEVPDFVEGSP---------------------------GETK 411
Query: 854 PDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
L A R + + GR +S +NG+++H GRRG
Sbjct: 412 HGLVNA-RVAEFRPMGSGRNSHSSFDNGTYKHGGRRG 447
Score = 32.3 bits (72), Expect(2) = e-107
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 676 YNSHERQVWVQKSGSAS 626
YN+HE+QVWVQKS S +
Sbjct: 469 YNTHEKQVWVQKSSSGT 485
>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
Length = 514
Score = 383 bits (984), Expect(2) = e-106
Identities = 242/528 (45%), Positives = 325/528 (61%), Gaps = 11/528 (2%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+++R LP +++ LVEQ+D+ F+GRY+W FRPGK+SQK Q +SRAYI+FKR EDV+
Sbjct: 8 TKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDFKRSEDVL 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK +VEYAPSQRVPK K DGREGTI KD EY+EFLE + K
Sbjct: 68 EFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEYLEFLECLGK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLERKEAERAG K+ PI+TPLMDFVR+KRAAK GS++ NGK+S+R G
Sbjct: 128 PVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLSRRAG 187
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
+KRGS++R+ +T+ YVL+DS+K KDK TYIL+S K D+ SDK V
Sbjct: 188 GSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVS-KRDEQQLSDKHV 246
Query: 1574 NVPSTIEKEGVEDEFG-PGV-ESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVK---- 1413
+ S++ E E+E G PG+ ++ K + +LLKGKE+E S + Q V SP+K
Sbjct: 247 ALASSMGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTSPIKTILG 306
Query: 1412 GSPIFSSKKNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSAS 1239
+P + + ++ GR+I+ I L K+ R + S + +EQQ++ +N+E D+ P R
Sbjct: 307 STP--TKQNSRREGRMIRGILLNKDARQNQS--SGVQSEQQIRTSNLEKDRRPPR----- 357
Query: 1238 LNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPL 1059
+S H+ V D +D K ++ H SEK ERR RNKDRPDRGVW L
Sbjct: 358 -HSHSHL--------VLKDTNTASDDKVVGNDLH---GSEKPERRCRNKDRPDRGVWT-L 404
Query: 1058 RRPDRSQSNDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHET 879
RR D S ++D +S+++S+ S L+
Sbjct: 405 RRSDGSYASDE------SMSSSASQ--------------------------SALIPLDPL 432
Query: 878 PLGYGERKPDLSYASRSEDIKVHRGGRVDYSGAENGSH-RHVGRRGSL 738
YG+ K DLS RS +K GR S +NGSH +HV RRG++
Sbjct: 433 EGTYGDTKVDLSNV-RSVQVKTVGSGR--NSSLDNGSHNKHVSRRGAV 477
Score = 32.3 bits (72), Expect(2) = e-106
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 676 YNSHERQVWVQKSGSAS 626
Y SHE+QVWVQKS S S
Sbjct: 498 YGSHEKQVWVQKSSSGS 514
>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
tuberosum]
Length = 483
Score = 382 bits (981), Expect(2) = e-105
Identities = 225/517 (43%), Positives = 305/517 (58%), Gaps = 2/517 (0%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
+K+V+R LP ++S + L++Q+DSRFAGRY+WFCF PGK+SQK Q +SRAYI FK PEDV+
Sbjct: 8 SKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEFKMPEDVI 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK +VEYAPSQRVPK W K DGREGTI KDPEY+EFLE +SK
Sbjct: 68 EFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKHWSKKDGREGTILKDPEYLEFLEFISK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLERKEAERAG+ K+API+TPLMD++R+KRAAK+G++K NG+ ++R
Sbjct: 128 PIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANGRPTRRTS 187
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
+KR S++R+ +T+ YVL+DS K KDK TYIL +++DQ A
Sbjct: 188 GTSTGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQRAEKSGT 246
Query: 1574 NVPSTIEKEGVEDEFGPGVESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVKGSPIFS 1395
+ ++ VE+E G + GK + +LLK KE +
Sbjct: 247 SAAGSV-ANAVEEETGGAADVGKKKILLLKEKENP------------------------N 281
Query: 1394 SKKNQTSGRIIKSILTKEGRMDFSFINTTHTEQQMQVANVEDKHPSRPPSASLNSKDHIP 1215
+++ + SGRII+SIL K+ R + QQ + +DK P RPPS L ++
Sbjct: 282 NQRREASGRIIRSILLKDARQN----QAPSASQQDKHRVDKDKKPPRPPSVQLFQRE--- 334
Query: 1214 CISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQS 1035
+ +++D K + H+ V +EK E+RTR +DRPDRGVW PLRR D +
Sbjct: 335 -----TNGANED------KVLGADLHI-VHTEKQEKRTRIRDRPDRGVWTPLRRSDSLHA 382
Query: 1034 NDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERK 855
+D LS+++S+ V G + E NARG A P+G
Sbjct: 383 SDE------SLSSSASQSSEVPDFVEGS--QGETKHGLANARG-----AEFRPMG----- 424
Query: 854 PDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
GR YS +NG+++H GRRG
Sbjct: 425 ----------------SGRNSYSSFDNGTYKHGGRRG 445
Score = 30.0 bits (66), Expect(2) = e-105
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1
Query: 676 YNSHERQVWVQKSGSAS 626
Y +HE+QVWVQKS S +
Sbjct: 467 YGTHEKQVWVQKSSSGT 483
>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
gi|550312328|gb|ERP48419.1| hypothetical protein
POPTR_0022s00460g [Populus trichocarpa]
Length = 511
Score = 387 bits (993), Expect = e-104
Identities = 231/517 (44%), Positives = 309/517 (59%), Gaps = 2/517 (0%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+VVR LP +S VEQID F+GRY+W +RPGK+SQK Q SRAYI+FKRP+DV+
Sbjct: 9 TKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSYRPGKSSQKHQSCSRAYIDFKRPDDVI 68
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
+FAEFF GH+FVNEKG QFKA+VEYAPSQ VPK W K DGREGTI KDPEY+EFLE ++K
Sbjct: 69 DFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYLEFLEFIAK 128
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLER+EAERAG K+API+TPLM+F+R+KRAAK+G +++ NGK S+R G
Sbjct: 129 PVENLPSAEIQLERREAERAGVAKDAPIVTPLMEFIRQKRAAKSGPRRILSNGKPSRRAG 188
Query: 1748 VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSVNV 1569
+KRGS++++ +T+ YVL+D++K K+K Y + + +D+ + ++
Sbjct: 189 GSGSPSSSSSKRGSEKKRASTTMYVLRDTVKGTSGKEKSIYAQVPKLDDRQLSKAVTLGS 248
Query: 1568 PSTIEKEGVEDEFGPGVESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVKGSPIFSSK 1389
S E E +GK + +LLKGKE+E S + + + S S S+
Sbjct: 249 GSGTEVSEEETAVSGITGTGKKKILLLKGKEKEISLQQSISPSDRNIIS----STALKSQ 304
Query: 1388 KNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHIP 1215
++++SGR+IKSI L K+ R S + +E QMQ +N+E DK P RPP A L KD
Sbjct: 305 RHESSGRVIKSILLNKDSRRIQS--SGVQSEPQMQTSNLEKDKRPPRPPHA-LVLKD--- 358
Query: 1214 CISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQS 1035
A+ + DDK V N +EK ERRTRNKDRPDR VW LRR + S +
Sbjct: 359 -----ANGTPDDK-------VVGNDLHGFPNEKQERRTRNKDRPDRVVWT-LRRSEGSYA 405
Query: 1034 NDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGERK 855
+D LS S G SQ G V+ D + +
Sbjct: 406 SDESLSSSAYLSTQS--GFDSSQVNHGDVKADTLNL------------------------ 439
Query: 854 PDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
RS ++K GR ++S +NGSH+H GRRG
Sbjct: 440 -------RSGEVKALGSGRSNHSSLDNGSHKHSGRRG 469
>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
[Solanum tuberosum]
Length = 482
Score = 378 bits (971), Expect(2) = e-104
Identities = 232/519 (44%), Positives = 307/519 (59%), Gaps = 4/519 (0%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+V+R LP ++S + L+E +DSRFAGRY+WF FRP K S K Q +S+AYI+F+ EDV
Sbjct: 6 TKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDVT 65
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK +VEYAPSQRVPK WLK D REGTI KDP YMEFLE ++K
Sbjct: 66 EFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLAK 125
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLERKEAERAG+ K+API+TPLMD+VR+KRA K+G+++ NGK SK +G
Sbjct: 126 PVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSVG 185
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
++RGS++R +T+ YV +DS K KDK +YIL+ ++ DQ +
Sbjct: 186 GTSSRSPSSTASRRGSEKR-TSTTMYVQRDSSKAGNSKDK-SYILLPKRGDQQLSVKSGS 243
Query: 1574 NVPSTIEKEGVEDEFGPGV--ESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVKGSPI 1401
+ P + E + VE E G V +SGK + +LLKGKE+E
Sbjct: 244 SAPGS-EIDVVEGEIGRSVTADSGKKKILLLKGKEKEGP--------------------- 281
Query: 1400 FSSKKNQTSGRIIKSILTKEGRMDFSFINTTHTEQQMQVANVEDKHPSRPPSASLNSKDH 1221
++++ + SGRII+SIL K+ R + S + + +D P RPPS L KD
Sbjct: 282 -NNQRQEASGRIIRSILLKDARQNQSAFQSDQIQD-------KDMRPPRPPSMQLFQKD- 332
Query: 1220 IPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRS 1041
S +++DK V N+ V EK ERR+RN+DRPDRGVWAPLRR D S
Sbjct: 333 -------TSGANEDK-------VVGNEKHVVHIEKQERRSRNRDRPDRGVWAPLRRADSS 378
Query: 1040 QSNDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGE 861
Q++ + + S G+ S Q VRE G GE
Sbjct: 379 QAS----------NGSLSSGIPQSSQ----VRE-------------------FVEGGQGE 405
Query: 860 RKPDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
K DL A R + + GR +S A+NG+++H GRRG
Sbjct: 406 LKNDLPIA-RGTEFRPIGSGRNSHSSADNGNYKHGGRRG 443
Score = 28.5 bits (62), Expect(2) = e-104
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 676 YNSHERQVWVQKSGSAS 626
Y+S E+QVWVQKS S S
Sbjct: 466 YSSLEKQVWVQKSSSGS 482
>gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 485
Score = 379 bits (972), Expect = e-102
Identities = 219/446 (49%), Positives = 291/446 (65%), Gaps = 10/446 (2%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+V+R LP S+S T+LVEQID F+GRY+W FRPGK SQK+ +SRAYI+ KRPEDV+
Sbjct: 9 TKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDLKRPEDVI 68
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG+QFK +VEYAPSQRVPK W K DGREGTI +DPEY+EFLE ++K
Sbjct: 69 EFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLEFLEFLAK 128
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
PAE+LPSAEIQLER+EAER+GA K+API+TPLMDFVR+KRA+K GS++ NGK S+R G
Sbjct: 129 PAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSRRAG 188
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
+KRGS+R++ + + YVL+D+ K KDK TYIL+ +++DQ S+KSV
Sbjct: 189 GPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQ-QPSEKSV 247
Query: 1574 NVPSTIEKEGVEDEFG-PGVESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVKGSPIF 1398
+ S +E+E G G ++ K + +LLKGKERE + P ++Q Q ++ G I
Sbjct: 248 TLASAAGTHVLEEESGVSGADAVKKKILLLKGKEREITHVPANMSQQQSSSAKNMGGTIA 307
Query: 1397 --SSKKNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLNS 1230
+ + Q +GRII+ I L K+ R S + ++ QQ+Q +N + DK P R L
Sbjct: 308 LKQNLRRQENGRIIRGILLNKDARQSQS--SGIYSAQQIQTSNSDRDKRPPRSQHVQLIL 365
Query: 1229 KDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRP 1050
KD ++ Y V N + SEK E+R RNK+RPDR VW PL R
Sbjct: 366 KD-----------TNGAPDYN----IVGNDLHGICSEKQEKRIRNKERPDRVVWTPLNRL 410
Query: 1049 DRSQSNDRIPPEVVQLS---ANSSEG 981
D S ++D Q + +SSEG
Sbjct: 411 DGSSASDESLSSAFQPAHSLLDSSEG 436
>gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 482
Score = 379 bits (972), Expect = e-102
Identities = 219/446 (49%), Positives = 291/446 (65%), Gaps = 10/446 (2%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+V+R LP S+S T+LVEQID F+GRY+W FRPGK SQK+ +SRAYI+ KRPEDV+
Sbjct: 9 TKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDLKRPEDVI 68
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG+QFK +VEYAPSQRVPK W K DGREGTI +DPEY+EFLE ++K
Sbjct: 69 EFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLEFLEFLAK 128
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
PAE+LPSAEIQLER+EAER+GA K+API+TPLMDFVR+KRA+K GS++ NGK S+R G
Sbjct: 129 PAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSRRAG 188
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
+KRGS+R++ + + YVL+D+ K KDK TYIL+ +++DQ S+KSV
Sbjct: 189 GPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQ-QPSEKSV 247
Query: 1574 NVPSTIEKEGVEDEFG-PGVESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVKGSPIF 1398
+ S +E+E G G ++ K + +LLKGKERE + P ++Q Q ++ G I
Sbjct: 248 TLASAAGTHVLEEESGVSGADAVKKKILLLKGKEREITHVPANMSQQQSSSAKNMGGTIA 307
Query: 1397 --SSKKNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLNS 1230
+ + Q +GRII+ I L K+ R S + ++ QQ+Q +N + DK P R L
Sbjct: 308 LKQNLRRQENGRIIRGILLNKDARQSQS--SGIYSAQQIQTSNSDRDKRPPRSQHVQLIL 365
Query: 1229 KDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRP 1050
KD ++ Y V N + SEK E+R RNK+RPDR VW PL R
Sbjct: 366 KD-----------TNGAPDYN----IVGNDLHGICSEKQEKRIRNKERPDRVVWTPLNRL 410
Query: 1049 DRSQSNDRIPPEVVQLS---ANSSEG 981
D S ++D Q + +SSEG
Sbjct: 411 DGSSASDESLSSAFQPAHSLLDSSEG 436
>gb|EMJ27362.1| hypothetical protein PRUPE_ppa015218mg [Prunus persica]
Length = 467
Score = 374 bits (961), Expect = e-101
Identities = 219/458 (47%), Positives = 289/458 (63%), Gaps = 8/458 (1%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK++VR LP S+S + L++QID + A RY+WFCFRPGKNSQK+QR+SRAYI+FKRPEDV
Sbjct: 8 TKVLVRHLPPSLSHSDLLQQIDHQLADRYNWFCFRPGKNSQKNQRYSRAYIDFKRPEDVF 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG+QFKA+VEYAPSQRVPK K DGREGTI KDP+Y+EFL+L++K
Sbjct: 68 EFAEFFDGHVFVNEKGSQFKAIVEYAPSQRVPKPCTKKDGREGTIYKDPDYLEFLKLIAK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P EHLPSAEIQLERKEAE+AG KE PIITPLM++VR+KRA +G+Q KV +R G
Sbjct: 128 PVEHLPSAEIQLERKEAEQAGGAKEPPIITPLMEYVRQKRAIGSGTQVSSVVRKVRRRAG 187
Query: 1748 VXXXXXXXXAKRG--SDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
KRG S +R Y+LKDS K KDK T+ ++ R+EDQ+++S
Sbjct: 188 A-----ASLNKRGSTSTKRVSEKKKYILKDSAKHTSRKDKSTFTVVPRREDQLASSSSVS 242
Query: 1574 NVPSTIEKEGVEDEFGPGVESGKTRFVLLKGKERESSDAPR-VLAQHQIVA--SPVKGSP 1404
+P +SGK + +LLKGKERE AP +L Q + + S V +P
Sbjct: 243 GIPVI-------------ADSGKKKILLLKGKEREIPSAPEGMLPQGSVTSAGSYVSAAP 289
Query: 1403 IFSSKKNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVEDKHPSRPPSASLNSK 1227
+++ + G++I++I L EGR S +Q++ N + K SRP +A L
Sbjct: 290 -KQNQRREAGGKLIRNILLNNEGRQSQS-STEIQPQQKILSLNSDVKRASRPSNARLGLN 347
Query: 1226 DHIPC--ISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRR 1053
+ +S++S D + D + D + SEK E+ TRNKDRPDRGVWAPLRR
Sbjct: 348 GQVSNNEPNSMSSEGDRKRATVDKFSKKDLHGTTNVSEKQEKHTRNKDRPDRGVWAPLRR 407
Query: 1052 PDRSQSNDRIPPEVVQLSANSSEGLSVSQQAVGKVRED 939
D S ++D P V Q S+ VS G+V++D
Sbjct: 408 ADSSHASDEHLPSVPQRPQLPSDSFEVSH---GEVKDD 442
>gb|EXB88206.1| hypothetical protein L484_011635 [Morus notabilis]
Length = 533
Score = 372 bits (954), Expect = e-100
Identities = 227/487 (46%), Positives = 305/487 (62%), Gaps = 18/487 (3%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK VVRRLP S+S + L +QID RF+GRY WFCFRPGKNSQK QR+SRAYI+F R EDV+
Sbjct: 8 TKAVVRRLPPSLSQSDLFQQIDDRFSGRYHWFCFRPGKNSQKHQRYSRAYIDFNRAEDVL 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG Q+K +VEYAPSQRVPKL + DGR+GTI KDP+Y+EFL+L++K
Sbjct: 68 EFAEFFDGHVFVNEKGVQYKTVVEYAPSQRVPKLSTRKDGRDGTIYKDPDYLEFLKLIAK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P EHLPSAEIQLERKEAE+AGA KEAPI+TPLM++VR+KR+ + G+Q K+S+R G
Sbjct: 128 PVEHLPSAEIQLERKEAEQAGAPKEAPIVTPLMEYVRQKRSIETGAQGSLVVRKISRRSG 187
Query: 1748 V--XXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
AKR S+++K Y+LK+ K KDK T+ ++ R+EDQ++ S
Sbjct: 188 AGSTRKPGSSSAKRASEKKK-----YILKEKTKNTSRKDKSTFTVVPRREDQLATSTGKE 242
Query: 1574 NVPSTIEK--EGVEDEFGPGVESGKTRFVLLKGKERESSDAPRVLAQHQIVA---SPVKG 1410
+ I EG +SGK +F+LLKGK R + P + Q Q + SPV
Sbjct: 243 THETEIVSAIEGSVSGIPVIADSGKKKFLLLKGK-RPETPVPTGMLQQQDTSFGNSPVSA 301
Query: 1409 SPIFSSKKNQTSGRIIKSILTKEGRMDFSFINTTHTEQQMQVANVEDKHPSRPPSASLNS 1230
+P + ++ + GR+I+SIL +Q++Q++N E + R P S NS
Sbjct: 302 APKHNQRR-EAGGRLIRSILLNNESRQAQTSTPGQHQQKVQISNSE--NVKRLPRPSSNS 358
Query: 1229 KDHIPCISSLASVSDDDKKYTDGKAAVDNKH-VSVSSEKHERRTRNKDRPDRGVWAPLRR 1053
+ + S D KK D K + H +S +SEK E+RTRNKDRPDRGVWAPLRR
Sbjct: 359 RSGLNGHVSHNDPEWDRKKDLDDKFTKKDLHNMSTASEKPEKRTRNKDRPDRGVWAPLRR 418
Query: 1052 PDRSQS-NDRIPPEVVQLSANSSEGLSVSQQAVGKVR-----EDEV---VIQTRNA-RGS 903
D S S +RI V Q + + S+ + S + G+ +DEV V + +++ RG+
Sbjct: 419 GDVSHSGEERISSSVSQPTHSVSDTVEGSHRNFGRRGTAHNVKDEVPQNVSEGKSSKRGA 478
Query: 902 NLLAAHE 882
+ AHE
Sbjct: 479 TVHGAHE 485
>ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263168 [Solanum
lycopersicum]
Length = 438
Score = 370 bits (951), Expect = 1e-99
Identities = 214/428 (50%), Positives = 277/428 (64%), Gaps = 8/428 (1%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+V+R LP ++S + L+E +DSRFAGRY+WF FRP K S K Q +S+AYI+F+ EDV
Sbjct: 6 TKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFNFRPAKTSLKHQSYSKAYIDFRNMEDVT 65
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK +VEYAPSQRVPK WLK D REGTI KDP YMEFLE ++K
Sbjct: 66 EFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLAK 125
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
P E+LPSAEIQLERKEAERAG+ K+API+TPLMD+VR+KRA +G++K NGK SK +G
Sbjct: 126 PVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVTSGARKSISNGKSSKSVG 185
Query: 1748 --VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
++RGS++R +T+ YV +DS K KDK +YIL S+ Q + S
Sbjct: 186 GTSSRSPSSTASRRGSEKR-TSTTMYVQRDSSKVGNSKDK-SYILASKCGYQQLSDKSSA 243
Query: 1574 NVPSTIEKEGVEDEFGPGV--ESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVKGSPI 1401
+ P + + VE E G V +SGK + +LLKGKE+ES + Q V+S +K SP
Sbjct: 244 SAPGS-WIDVVEGEIGRSVTSDSGKKKILLLKGKEKESPNVSGGSLAQQNVSSALKNSPS 302
Query: 1400 FSSKK----NQTSGRIIKSILTKEGRMDFSFINTTHTEQQMQVANVEDKHPSRPPSASLN 1233
S+ K + GRII+SIL K+ R + S + + +D P RPPS L
Sbjct: 303 LSALKLNQHQEVGGRIIRSILLKDARQNQSAFQSDQIQD-------KDMRPPRPPSMQLF 355
Query: 1232 SKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRR 1053
KD S +++DK V N+ V EK ERR+RN+DRPDRGVWAPLRR
Sbjct: 356 QKD--------TSGANEDK-------VVGNEKHVVHIEKQERRSRNRDRPDRGVWAPLRR 400
Query: 1052 PDRSQSND 1029
D SQ+++
Sbjct: 401 ADSSQASN 408
>gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
cacao]
Length = 440
Score = 365 bits (937), Expect = 5e-98
Identities = 217/437 (49%), Positives = 288/437 (65%), Gaps = 17/437 (3%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+++R LP +++ LVEQ+D+ F+GRY+W FRPGK+SQK Q +SRAYI+FKR EDV+
Sbjct: 8 TKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDFKRSEDVL 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISK-------DPEYME 1950
EFAEFF GH+FVNEKG QFK +VEYAPSQRVPK K DGREGTI K D EY+E
Sbjct: 68 EFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKVFLDEHLDLEYLE 127
Query: 1949 FLELVSKPAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNG 1770
FLE + KP E+LPSAEIQLERKEAERAG K+ PI+TPLMDFVR+KRAAK GS++ NG
Sbjct: 128 FLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNG 187
Query: 1769 KVSKRLG--VXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQM 1596
K+S+R G +KRGS++R+ +T+ YVL+DS+K KDK TYIL+S K D+
Sbjct: 188 KLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVS-KRDEQ 246
Query: 1595 SASDKSVNVPSTIEKEGVEDEFG-PGV-ESGKTRFVLLKGKERESSDAPRVLAQHQIVAS 1422
SDK V + S++ E E+E G PG+ ++ K + +LLKGKE+E S + Q V S
Sbjct: 247 QLSDKHVALASSMGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTS 306
Query: 1421 PVK----GSPIFSSKKNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVE-DKHP 1260
P+K +P + + ++ GR+I+ I L K+ R + S + +EQQ++ +N+E D+ P
Sbjct: 307 PIKTILGSTP--TKQNSRREGRMIRGILLNKDARQNQS--SGVQSEQQIRTSNLEKDRRP 362
Query: 1259 SRPPSASLNSKDHIPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPD 1080
R +S H+ V D +D K ++ H SEK ERR RNKDRPD
Sbjct: 363 PR------HSHSHL--------VLKDTNTASDDKVVGNDLH---GSEKPERRCRNKDRPD 405
Query: 1079 RGVWAPLRRPDRSQSND 1029
RGVW LRR D S ++D
Sbjct: 406 RGVWT-LRRSDGSYASD 421
>ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296641 [Fragaria vesca
subsp. vesca]
Length = 515
Score = 364 bits (934), Expect = 1e-97
Identities = 226/523 (43%), Positives = 302/523 (57%), Gaps = 4/523 (0%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK++VR LP S+S + +QID F R++WFCFRPGKNS K QR+SRAYI FKRPEDV
Sbjct: 8 TKVLVRHLPPSLSQSDFFQQIDHLFGDRHNWFCFRPGKNSHKHQRYSRAYIEFKRPEDVF 67
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QFK++VEYAPSQRVPK K DGREGTI KDP+Y+EFL+L++K
Sbjct: 68 EFAEFFDGHVFVNEKGTQFKSIVEYAPSQRVPKPSNKKDGREGTIYKDPDYLEFLKLIAK 127
Query: 1928 PAEHLPSAEIQLERKEAERAGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRLG 1749
PAEHLPSAEIQLERKEAE+AGA KEAPI+TPLM+++R+KRA +G+Q KV +R G
Sbjct: 128 PAEHLPSAEIQLERKEAEQAGAAKEAPIVTPLMEYIRQKRAVGSGTQISSVVRKVRRRTG 187
Query: 1748 VXXXXXXXXAKRG--SDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSV 1575
+KRG S +R Y+LKD+ K KD+ T+ ++ R+EDQ+++S
Sbjct: 188 A-----ASFSKRGSTSTKRVSEKKKYILKDTAKYTSRKDRSTFNVLPRREDQLASSSGKD 242
Query: 1574 NVPSTIEKEGVEDEFGPGVESGKTRFVLLKGKERESSDAPRVLAQHQ--IVASPVKGSPI 1401
+ + I G +SG+T+ +L +RE+ AP ++QHQ I +SPV SP
Sbjct: 243 TMGNEI---GSVSGIPVIADSGRTKILL----KRETPPAPEGISQHQASIGSSPVSASP- 294
Query: 1400 FSSKKNQTSGRIIKSILTKEGRMDFSFINTTHTEQQMQVANVEDKHPSRPPSASLNSKDH 1221
+++ SGR ++SIL+ ++Q++ N + K RP +A L +
Sbjct: 295 KQNQRRDASGRFLRSILSHNEVRQREASAEVQSQQKILGPNSDIKRVPRPSNARLGLNNE 354
Query: 1220 IPCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRS 1041
+S++S D + D D + SEK +R TRNKDRPDRGVW PLRR + S
Sbjct: 355 ---TNSMSSEGDRRRVMVDKFTKKDMHGTTNISEKQDRHTRNKDRPDRGVWTPLRRAESS 411
Query: 1040 QSNDRIPPEVVQLSANSSEGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYGE 861
NS E LS S ++ D V E P +GE
Sbjct: 412 H--------------NSDEHLSSSASQRPQLLSDSV----------------EVP--HGE 439
Query: 860 RKPDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRGSLRS 732
K D SY SR+ ++ GS+RH GRRG+ S
Sbjct: 440 VKADTSYGSRTGEV-------------PTGSNRHFGRRGTASS 469
>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
gi|223534215|gb|EEF35930.1| conserved hypothetical
protein [Ricinus communis]
Length = 472
Score = 352 bits (902), Expect(2) = 6e-97
Identities = 233/520 (44%), Positives = 291/520 (55%), Gaps = 5/520 (0%)
Frame = -3
Query: 2288 TKIVVRRLPSSMSSTTLVEQIDSRFAGRYDWFCFRPGKNSQKDQRHSRAYINFKRPEDVV 2109
TK+VVR LP ++S + +EQID F+GRY+W FRPGK+SQK Q +SRAYI+FKRPEDV+
Sbjct: 9 TKVVVRHLPPTISQGSFLEQIDVVFSGRYNWVSFRPGKSSQKHQSYSRAYIDFKRPEDVI 68
Query: 2108 EFAEFFGGHIFVNEKGAQFKALVEYAPSQRVPKLWLKNDGREGTISKDPEYMEFLELVSK 1929
EFAEFF GH+FVNEKG QF+A+VEYAPSQ VPK W K DGREGTI KDP Y+EFLEL+SK
Sbjct: 69 EFAEFFNGHLFVNEKGTQFRAIVEYAPSQHVPKQWSKKDGREGTIVKDPAYLEFLELISK 128
Query: 1928 PAEHLPSAEIQLERKEAER-AGAIKEAPIITPLMDFVRRKRAAKNGSQKLFGNGKVSKRL 1752
PAE+LPSAEIQLER+EAER A A K+API+TPLMDFVR+KRAAK GS+
Sbjct: 129 PAENLPSAEIQLERREAERAASAAKDAPIVTPLMDFVRQKRAAKTGSR------------ 176
Query: 1751 GVXXXXXXXXAKRGSDRRKVATSNYVLKDSMKKRGPKDKPTYILMSRKEDQMSASDKSVN 1572
YVL+DS K KDK TY+L+ +++DQ SDKS
Sbjct: 177 ------------------------YVLRDSAKSTSGKDKSTYLLVPKRDDQ-QFSDKSTP 211
Query: 1571 VPSTIEKEGVEDEFGPGVESGKTRFVLLKGKERESSDAPRVLAQHQIVASPVKGSPIFSS 1392
S E +EDE + V L G + + A V S I S
Sbjct: 212 FASASGTEVLEDE--SELYHLCLLIVQLSGGMSKQNAAS--------FDKNVTSSAIKQS 261
Query: 1391 KKNQTSGRIIKSI-LTKEGRMDFSFINTTHTEQQMQVANVE-DKHPSRPPSASLNSKDHI 1218
++ ++SGRII+SI L K+ R + S + +EQQ+Q +N+E +K RP L KD
Sbjct: 262 QRRESSGRIIRSILLNKDSRQNQS--SGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKD-- 317
Query: 1217 PCISSLASVSDDDKKYTDGKAAVDNKHVSVSSEKHERRTRNKDRPDRGVWAPLRRPDRSQ 1038
+ S DDK V N S EK E+RTRNKDRPDR VW PLRR D S
Sbjct: 318 ------VNGSSDDK-------FVGNDLHGFSGEKQEKRTRNKDRPDRVVWTPLRRSDGSY 364
Query: 1037 SNDRIPPEVVQLSANSS--EGLSVSQQAVGKVREDEVVIQTRNARGSNLLAAHETPLGYG 864
++D E + SA+ S G SQ +G ++ D
Sbjct: 365 ASD----ESLSSSASQSTHTGQDSSQGNLGDIKVD------------------------- 395
Query: 863 ERKPDLSYASRSEDIKVHRGGRVDYSGAENGSHRHVGRRG 744
S SRS D+K GR +S +NGSH+H GRRG
Sbjct: 396 ------SSNSRSGDVKTLGSGRSSHSSLDNGSHKHFGRRG 429
Score = 32.3 bits (72), Expect(2) = 6e-97
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1
Query: 676 YNSHERQVWVQKSGSAS 626
Y SHE+QVWVQKS S S
Sbjct: 456 YGSHEKQVWVQKSSSGS 472