BLASTX nr result

ID: Zingiber25_contig00001081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00001081
         (651 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003579677.1| PREDICTED: DNA-binding protein S1FA2-like [B...    58   3e-06
ref|XP_006652249.1| PREDICTED: DNA-binding protein S1FA2-like [O...    57   5e-06

>ref|XP_003579677.1| PREDICTED: DNA-binding protein S1FA2-like [Brachypodium distachyon]
          Length = 80

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/80 (41%), Positives = 38/80 (47%)
 Frame = +3

Query: 126 MDESFSDAAGHVIRERATNGLNPXXXXXXXXXXXXXXXXXXNYALYTYAQRTLXXXXXXX 305
           M E F D+A +VI E A  GLNP                  NYALY YAQ+TL       
Sbjct: 1   MAEQFGDSANNVIIEEANKGLNPGMIVLLVVATFLLLFFVGNYALYLYAQKTLPPKKKKP 60

Query: 306 XXXXXXXXERLRQGVSAPGE 365
                   E+L+QGVSAPGE
Sbjct: 61  VSKKKLKREKLKQGVSAPGE 80


>ref|XP_006652249.1| PREDICTED: DNA-binding protein S1FA2-like [Oryza brachyantha]
          Length = 80

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/80 (38%), Positives = 39/80 (48%)
 Frame = +3

Query: 126 MDESFSDAAGHVIRERATNGLNPXXXXXXXXXXXXXXXXXXNYALYTYAQRTLXXXXXXX 305
           M E F+D+A +V+ E  + GLNP                  NYALY YAQ+TL       
Sbjct: 1   MAEQFADSANNVVIEEVSKGLNPGMIVLLVVATFLLLFFVGNYALYVYAQKTLPPRKKKP 60

Query: 306 XXXXXXXXERLRQGVSAPGE 365
                   E+L+QGVSAPGE
Sbjct: 61  VSKKKMKREKLKQGVSAPGE 80


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