BLASTX nr result
ID: Zingiber25_contig00000986
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00000986
(308 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis gu... 77 2e-12
gb|AAZ99673.1| 40s ribosomal protein S3 [Cymbidium faberi] 76 5e-12
gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar] 76 5e-12
ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [A... 71 1e-10
gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao] 69 6e-10
sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; ... 68 1e-09
ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [A... 67 2e-09
gb|AAV92214.1| 40S ribosomal protein S3a [Pseudotsuga menziesii ... 67 2e-09
ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [C... 66 4e-09
gb|AGZ15363.1| 40S ribosomal protein S3a-like protein [Phaseolus... 65 7e-09
gb|AAX55706.1| cyc07 [Vitis vinifera] 65 7e-09
ref|NP_001275123.1| cyc07-like protein [Solanum tuberosum] gi|82... 65 7e-09
gb|ABB72808.1| cyc07-like protein [Solanum tuberosum] 65 7e-09
gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB... 65 7e-09
ref|NP_001274913.1| 40S ribosomal protein S3a-like [Solanum tube... 65 7e-09
ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Viti... 65 7e-09
ref|XP_006382773.1| 40S ribosomal protein S3A [Populus trichocar... 65 9e-09
gb|ACN40078.1| unknown [Picea sitchensis] 65 9e-09
ref|XP_002328352.1| predicted protein [Populus trichocarpa] gi|5... 65 9e-09
gb|ABK93399.1| unknown [Populus trichocarpa] 65 9e-09
>gb|AFS65104.1| 40S ribosomal protein S3a-like protein [Elaeis guineensis]
Length = 261
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDYKEDVGVK++RPA+DVPMEGE E VGA
Sbjct: 222 KFDLGKLMEVHGDYKEDVGVKIDRPADDVPMEGEPEVVGA 261
>gb|AAZ99673.1| 40s ribosomal protein S3 [Cymbidium faberi]
Length = 71
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDYKED GVKL+RP EDVP+EGEAE VGA
Sbjct: 32 KFDLGKLMEVHGDYKEDFGVKLDRPGEDVPVEGEAEVVGA 71
>gb|ABK56834.1| RPS3 [Cymbidium hybrid cultivar]
Length = 261
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDYKED GVKL+RP EDVP+EGEAE VGA
Sbjct: 222 KFDLGKLMEVHGDYKEDFGVKLDRPGEDVPVEGEAEVVGA 261
>ref|XP_006848758.1| hypothetical protein AMTR_s00026p00042160 [Amborella trichopoda]
gi|548852191|gb|ERN10339.1| hypothetical protein
AMTR_s00026p00042160 [Amborella trichopoda]
Length = 261
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY +DVGVK++RPAEDVP+EG E VGA
Sbjct: 222 KFDLGKLMEVHGDYSDDVGVKVDRPAEDVPLEGVTEVVGA 261
>gb|EOY11117.1| Ribosomal protein S3Ae [Theobroma cacao]
Length = 261
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVKLERPA++ EGE E VGA
Sbjct: 222 KFDLGKLMEVHGDYSEDVGVKLERPADETTAEGETEVVGA 261
>sp|Q9MBB3.1|RS3A_DAUCA RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein
cyc07 gi|6714564|dbj|BAA89498.1| cyc07 [Daucus carota]
Length = 261
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFD+GKLMEVHGDY EDVGVKLERP E+ +EGE E VGA
Sbjct: 222 KFDIGKLMEVHGDYSEDVGVKLERPIEETMVEGETEVVGA 261
>ref|XP_006838990.1| hypothetical protein AMTR_s00002p00271660 [Amborella trichopoda]
gi|548841496|gb|ERN01559.1| hypothetical protein
AMTR_s00002p00271660 [Amborella trichopoda]
Length = 265
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAE 197
KFDLGKLMEVHGDY +DVGVK+ERPAEDV M+GE E
Sbjct: 227 KFDLGKLMEVHGDYSDDVGVKVERPAEDVAMDGETE 262
>gb|AAV92214.1| 40S ribosomal protein S3a [Pseudotsuga menziesii var. menziesii]
gi|56481169|gb|AAV92215.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481171|gb|AAV92216.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481173|gb|AAV92217.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481175|gb|AAV92218.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481177|gb|AAV92219.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481179|gb|AAV92220.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481181|gb|AAV92221.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481183|gb|AAV92222.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481185|gb|AAV92223.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481187|gb|AAV92224.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481189|gb|AAV92225.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481191|gb|AAV92226.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481193|gb|AAV92227.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481195|gb|AAV92228.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481197|gb|AAV92229.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481199|gb|AAV92230.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481201|gb|AAV92231.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481203|gb|AAV92232.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481205|gb|AAV92233.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481207|gb|AAV92234.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481209|gb|AAV92235.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481211|gb|AAV92236.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481213|gb|AAV92237.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481215|gb|AAV92238.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481217|gb|AAV92239.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481219|gb|AAV92240.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
gi|56481221|gb|AAV92241.1| 40S ribosomal protein S3a
[Pseudotsuga menziesii var. menziesii]
Length = 57
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVK++RP ++VP E E E VGA
Sbjct: 18 KFDLGKLMEVHGDYSEDVGVKVDRPVDEVPAEAETELVGA 57
>ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
gi|449518719|ref|XP_004166384.1| PREDICTED: 40S
ribosomal protein S3a-like [Cucumis sativus]
Length = 261
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVK+ERPA++ +EG E VGA
Sbjct: 222 KFDLGKLMEVHGDYSEDVGVKVERPADETAVEGATEVVGA 261
>gb|AGZ15363.1| 40S ribosomal protein S3a-like protein [Phaseolus vulgaris]
gi|561030532|gb|ESW29111.1| hypothetical protein
PHAVU_002G044200g [Phaseolus vulgaris]
Length = 261
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVG K+ERPAE+ +EG E VGA
Sbjct: 222 KFDLGKLMEVHGDYSEDVGTKVERPAEETVVEGATEVVGA 261
>gb|AAX55706.1| cyc07 [Vitis vinifera]
Length = 237
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVK+ERPAE+ E E E VGA
Sbjct: 198 KFDLGKLMEVHGDYSEDVGVKMERPAEETVAEVETEVVGA 237
>ref|NP_001275123.1| cyc07-like protein [Solanum tuberosum] gi|82623437|gb|ABB87133.1|
40S ribosomal protein S3a-like [Solanum tuberosum]
Length = 261
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVKL+RPAE+ E EAE GA
Sbjct: 222 KFDLGKLMEVHGDYSEDVGVKLDRPAEETVAEAEAEVPGA 261
>gb|ABB72808.1| cyc07-like protein [Solanum tuberosum]
Length = 260
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVKL+RPAE+ E EAE GA
Sbjct: 221 KFDLGKLMEVHGDYSEDVGVKLDRPAEETVAEAEAEVPGA 260
>gb|ABB55362.1| cyc07-like [Solanum tuberosum] gi|82400152|gb|ABB72815.1|
cyc07-like protein [Solanum tuberosum]
Length = 261
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVKL+RPAE+ E EAE GA
Sbjct: 222 KFDLGKLMEVHGDYSEDVGVKLDRPAEETVAEAEAEVPGA 261
>ref|NP_001274913.1| 40S ribosomal protein S3a-like [Solanum tuberosum]
gi|81074465|gb|ABB55367.1| cyc07-like [Solanum
tuberosum] gi|82400110|gb|ABB72794.1| cyc07-like protein
[Solanum tuberosum]
Length = 261
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVKL+RPAE+ E EAE GA
Sbjct: 222 KFDLGKLMEVHGDYSEDVGVKLDRPAEETVAEAEAEVPGA 261
>ref|XP_002277791.1| PREDICTED: 40S ribosomal protein S3a-1 [Vitis vinifera]
Length = 261
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVK+ERPAE+ E E E VGA
Sbjct: 222 KFDLGKLMEVHGDYSEDVGVKMERPAEETVAEVETEVVGA 261
>ref|XP_006382773.1| 40S ribosomal protein S3A [Populus trichocarpa]
gi|550338141|gb|ERP60570.1| 40S ribosomal protein S3A
[Populus trichocarpa]
Length = 261
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY +D+GVK++RPA++ EGE E VGA
Sbjct: 222 KFDLGKLMEVHGDYSQDIGVKIDRPADETVAEGETEVVGA 261
>gb|ACN40078.1| unknown [Picea sitchensis]
Length = 260
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY EDVGVK++R E+ P E EAE VGA
Sbjct: 221 KFDLGKLMEVHGDYSEDVGVKVDRTTEEAPAEAEAELVGA 260
>ref|XP_002328352.1| predicted protein [Populus trichocarpa]
gi|566169607|ref|XP_006382772.1| hypothetical protein
POPTR_0005s05280g [Populus trichocarpa]
gi|550338140|gb|ERP60569.1| hypothetical protein
POPTR_0005s05280g [Populus trichocarpa]
Length = 265
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY +D+GVK++RPA++ EGE E VGA
Sbjct: 226 KFDLGKLMEVHGDYSQDIGVKIDRPADETVAEGETEVVGA 265
>gb|ABK93399.1| unknown [Populus trichocarpa]
Length = 261
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -2
Query: 304 KFDLGKLMEVHGDYKEDVGVKLERPAEDVPMEGEAEPVGA 185
KFDLGKLMEVHGDY +D+GVK++RPA++ EGE E VGA
Sbjct: 222 KFDLGKLMEVHGDYSQDIGVKIDRPADETVAEGETEVVGA 261