BLASTX nr result

ID: Zingiber25_contig00000958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00000958
         (397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845984.1| hypothetical protein AMTR_s00155p00032400 [A...    59   5e-07
gb|AFW59466.1| hypothetical protein ZEAMMB73_490689 [Zea mays]         56   4e-06
ref|NP_001169245.1| hypothetical protein [Zea mays] gi|223975761...    56   4e-06

>ref|XP_006845984.1| hypothetical protein AMTR_s00155p00032400 [Amborella trichopoda]
           gi|548848740|gb|ERN07659.1| hypothetical protein
           AMTR_s00155p00032400 [Amborella trichopoda]
          Length = 417

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +2

Query: 257 MLPANRSRSQPRASRPWPLSGMDNSESRRRPQIIGKLAMAFMLTALC 397
           MLP+ R+R+Q R+SR W  SGMD  +SRR+P  +GK+ +A  LTALC
Sbjct: 1   MLPSARNRAQSRSSRSWSFSGMDYGDSRRKPHFVGKVLLAGFLTALC 47


>gb|AFW59466.1| hypothetical protein ZEAMMB73_490689 [Zea mays]
          Length = 140

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +2

Query: 272 RSRSQPRASRPWPLSGMDNSESRRRPQIIGKLAMAFMLTALC 397
           RSRSQ R +RPW LSGMD ++SRR+P   GK+A+A  LT +C
Sbjct: 6   RSRSQARTTRPWILSGMDFADSRRKPNFTGKIAVAAALTVMC 47


>ref|NP_001169245.1| hypothetical protein [Zea mays] gi|223975761|gb|ACN32068.1| unknown
           [Zea mays] gi|413919533|gb|AFW59465.1| hypothetical
           protein ZEAMMB73_490689 [Zea mays]
          Length = 415

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/42 (59%), Positives = 32/42 (76%)
 Frame = +2

Query: 272 RSRSQPRASRPWPLSGMDNSESRRRPQIIGKLAMAFMLTALC 397
           RSRSQ R +RPW LSGMD ++SRR+P   GK+A+A  LT +C
Sbjct: 6   RSRSQARTTRPWILSGMDFADSRRKPNFTGKIAVAAALTVMC 47


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