BLASTX nr result
ID: Zingiber25_contig00000849
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00000849
(1051 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei... 408 e-111
emb|CBI36876.3| unnamed protein product [Vitis vinifera] 406 e-111
gb|ACJ84781.1| unknown [Medicago truncatula] 394 e-107
ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanu... 392 e-106
gb|AFK36658.1| unknown [Medicago truncatula] 391 e-106
ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotei... 387 e-105
ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutr... 385 e-104
ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotei... 384 e-104
ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, p... 380 e-103
gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus... 379 e-102
ref|XP_006294873.1| hypothetical protein CARUB_v10023926mg [Caps... 379 e-102
ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotei... 378 e-102
ref|XP_006444378.1| hypothetical protein CICLE_v10021907mg [Citr... 378 e-102
ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arab... 377 e-102
ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]... 377 e-102
gb|ACU24174.1| unknown [Glycine max] 376 e-102
ref|XP_002302719.1| predicted protein [Populus trichocarpa] 375 e-101
ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarp... 374 e-101
ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycin... 374 e-101
ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotei... 373 e-101
>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 408 bits (1049), Expect = e-111
Identities = 201/234 (85%), Positives = 217/234 (92%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIKL+ELKKSL AVFSQFGKI+EVLAFKTLKHKGQAWV+FE+VSSAT A
Sbjct: 13 NMTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSD+IAKADGTFVPRERR+RHDDRA RK+R+ HD+ QA
Sbjct: 73 LRQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRRE-QHDANQA 131
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G G+N AY GAYGA PPLSQ+PY GG+KS +PEAPA PNNILF+QNLPHE TPMMLQMFF
Sbjct: 132 GVGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFF 191
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQG KI QNPMLITYAKK
Sbjct: 192 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 245
>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 406 bits (1043), Expect = e-111
Identities = 200/233 (85%), Positives = 216/233 (92%), Gaps = 1/233 (0%)
Frame = +3
Query: 117 MTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEAL 296
MTIYINNLNEKIKL+ELKKSL AVFSQFGKI+EVLAFKTLKHKGQAWV+FE+VSSAT AL
Sbjct: 1 MTIYINNLNEKIKLEELKKSLFAVFSQFGKIMEVLAFKTLKHKGQAWVVFEEVSSATNAL 60
Query: 297 KRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQAG 476
++MQGFPFYDKPMRIQYAKTKSD+IAKADGTFVPRERR+RHDDRA RK+R+ HD+ QAG
Sbjct: 61 RQMQGFPFYDKPMRIQYAKTKSDVIAKADGTFVPRERRRRHDDRAGRKRRE-QHDANQAG 119
Query: 477 AGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFC 656
G+N AY GAYGA PPLSQ+PY GG+KS +PEAPA PNNILF+QNLPHE TPMMLQMFFC
Sbjct: 120 VGVNPAYGGAYGAAPPLSQIPYLGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFC 179
Query: 657 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQG KI QNPMLITYAKK
Sbjct: 180 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 232
>gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 394 bits (1011), Expect = e-107
Identities = 194/234 (82%), Positives = 216/234 (92%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIK+DELKKSL AVFSQFGKILEVLAFKTLKHKGQAWVIFEDV+SA+ A
Sbjct: 13 NMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYA+TKSD+IAKA+GTFVPRE+RKRHDD+A +K++D +D+ A
Sbjct: 73 LRQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKD-QNDANLA 131
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G GLN AY+GAYGA P LSQ+PY GG+KS+LPEAPA PNNILF+QNLP+ETTPMMLQM F
Sbjct: 132 GTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLF 191
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
QYPGFKEVRMVEAKPGIAFVEYGDEMQST+AMQ LQGFKI QNPMLITYAKK
Sbjct: 192 LQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 245
>ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanum tuberosum]
gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A
[Solanum tuberosum]
Length = 253
Score = 392 bits (1006), Expect = e-106
Identities = 191/234 (81%), Positives = 216/234 (92%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N+TIYINNLNEKIKL+ELKKS+ AVFSQFGKILEVLAFKTLKHKGQAWV+FE+VSSA+ A
Sbjct: 22 NVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFEEVSSASNA 81
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSD++AKADGTFVPRE+RKRH+D+ RKK+D DS QA
Sbjct: 82 LRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKG-RKKKD-QQDSNQA 139
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G GLN AY+GAYGA PP SQ+PY GG+K+ +PEAPA PN+ILFVQNLPH++TPMMLQM F
Sbjct: 140 GMGLNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLF 199
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
CQYPGFKEVRM+EAKPGIAF+EYGDEMQSTVAMQ LQGFKIT +NPMLITYAKK
Sbjct: 200 CQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITYAKK 253
>gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 391 bits (1005), Expect = e-106
Identities = 193/233 (82%), Positives = 215/233 (92%), Gaps = 1/233 (0%)
Frame = +3
Query: 117 MTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEAL 296
MTIYINNLNEKIK+DELKKSL AVFSQFGKILEVLAFKTLKHKGQAWVIFEDV+SA+ AL
Sbjct: 1 MTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVTSASNAL 60
Query: 297 KRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQAG 476
++MQGFPFYDKPMRIQYA+TKSD+IAKA+GTFVPRE+RKRHDD+A +K++D +D+ AG
Sbjct: 61 RQMQGFPFYDKPMRIQYARTKSDVIAKAEGTFVPREKRKRHDDKAGKKRKD-QNDANLAG 119
Query: 477 AGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFC 656
GLN AY+GAYGA P LSQ+PY GG+KS+LPEAPA PNNILF+QNLP+ETTPMMLQM F
Sbjct: 120 TGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLFL 179
Query: 657 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
QYPGFKEVRMVEAKPGIAFVEYGDEMQST+AMQ LQGFKI QNPMLITYAKK
Sbjct: 180 QYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 232
>ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
lycopersicum]
Length = 253
Score = 387 bits (993), Expect = e-105
Identities = 189/234 (80%), Positives = 214/234 (91%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N+TIYINNLNEKIKL+ELKKS+ AVFSQFGKILEVLAFKTLKHKGQAWV+F++VSSA+ A
Sbjct: 22 NVTIYINNLNEKIKLEELKKSMHAVFSQFGKILEVLAFKTLKHKGQAWVVFDEVSSASNA 81
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSD++AKADGTFVPRE+RKRH+D+ RKK+D D+ QA
Sbjct: 82 LRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKRHEDKG-RKKKD-QQDANQA 139
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G G N AY+GAYGA PP SQ+PY GG+K+ +PEAPA PN+ILFVQNLPH++TPMMLQM F
Sbjct: 140 GMGRNPAYAGAYGAAPPFSQIPYMGGAKAAVPEAPAPPNSILFVQNLPHQSTPMMLQMLF 199
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
CQYPGFKEVRMVEAKPGIAF+EYGDEMQSTVAMQ LQGFKIT NPMLITYAKK
Sbjct: 200 CQYPGFKEVRMVEAKPGIAFIEYGDEMQSTVAMQALQGFKITADNPMLITYAKK 253
>ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutrema salsugineum]
gi|557099025|gb|ESQ39405.1| hypothetical protein
EUTSA_v10001603mg [Eutrema salsugineum]
Length = 247
Score = 385 bits (988), Expect = e-104
Identities = 184/233 (78%), Positives = 205/233 (87%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+KLDELKKSL AVFSQFGKILEVLAFKTLKHKGQAWV+FE SA+ A
Sbjct: 15 NQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFESAESASTA 74
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+ +M GFPFYDKPMRIQ+AKTKSD++AKADGTFVPRE+RKRH+++ +KK++ HHDS Q
Sbjct: 75 IAKMNGFPFYDKPMRIQFAKTKSDVVAKADGTFVPREKRKRHEEKGGKKKKEQHHDSTQM 134
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G +NSAY G YGA PPLSQ+PY GG K +LPEAPA PNNILFVQNLPH+TTPM +QM F
Sbjct: 135 GNAMNSAYPGVYGAAPPLSQVPYPGGVKPILPEAPAPPNNILFVQNLPHDTTPMTVQMLF 194
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 812
QY GFKEVRMVEAKPGIAFVE+ DEMQSTVAMQGLQGFKI QNPMLITYAKK
Sbjct: 195 YQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQGLQGFKILQNPMLITYAKK 247
>ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer
arietinum]
Length = 241
Score = 384 bits (986), Expect = e-104
Identities = 194/234 (82%), Positives = 209/234 (89%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIK++ELKKSL AVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSA+ A
Sbjct: 13 NMTIYINNLNEKIKIEELKKSLHAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYA+TKSDIIAKADGTFVPRE+RKRHDD+ KKR HD+ A
Sbjct: 73 LRQMQGFPFYDKPMRIQYARTKSDIIAKADGTFVPREKRKRHDDKG--KKRKDQHDANLA 130
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G GLN +Y GAYGA P +PY GG+KSM+PEAPA PNNILF+QNLP+ETTPMMLQM F
Sbjct: 131 GMGLNPSYPGAYGATP---AIPYPGGAKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLF 187
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
QYPGFKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQGFKIT QNPMLITYAKK
Sbjct: 188 LQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 241
>ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis] gi|223537662|gb|EEF39285.1| small nuclear
ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
Length = 254
Score = 380 bits (976), Expect = e-103
Identities = 184/233 (78%), Positives = 208/233 (89%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIKLDELKKSL AVFSQFGKI+E+LAFKTLKHKGQAWV+FEDV SAT A
Sbjct: 24 NMTIYINNLNEKIKLDELKKSLHAVFSQFGKIIEILAFKTLKHKGQAWVVFEDVQSATNA 83
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+++MQ FPFYDKPMRI +AKTKSD+IAKADGTFVPRE+RKRH+++ +RKK HD+ QA
Sbjct: 84 IRQMQSFPFYDKPMRIHFAKTKSDVIAKADGTFVPREKRKRHEEKGKRKKEQ--HDANQA 141
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G G+ AY+GAYGA PPLSQ+PY GG+KSM+PEAPA PNNILF+QNLP++TT M+LQM F
Sbjct: 142 GIGMAPAYAGAYGATPPLSQIPYPGGAKSMVPEAPAPPNNILFIQNLPNDTTTMVLQMLF 201
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 812
Y GFKEVRMVE+KPGIAFVEY DEMQSTVAMQGLQG KI QNPMLITYAKK
Sbjct: 202 QHYAGFKEVRMVESKPGIAFVEYADEMQSTVAMQGLQGLKIQQNPMLITYAKK 254
>gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus vulgaris]
Length = 241
Score = 379 bits (972), Expect = e-102
Identities = 189/234 (80%), Positives = 208/234 (88%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINN+NEKIK++ELKKSL AVF+QFGKILEVLAFKTLKHKGQAWV+FEDVSSA+ A
Sbjct: 13 NNTIYINNINEKIKIEELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDVSSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPM+IQYAKTKSD+IAKADGTFVPRE+RKRHDD+ KKR HD+ A
Sbjct: 73 LRQMQGFPFYDKPMKIQYAKTKSDVIAKADGTFVPREKRKRHDDKG--KKRKDQHDANLA 130
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G GLN AYSG YGA P +PY GG+KSM+PEAPA PNNILF+QNLP+E+TPMMLQM F
Sbjct: 131 GMGLNPAYSGGYGATP---TIPYPGGAKSMVPEAPAPPNNILFIQNLPNESTPMMLQMLF 187
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
QYPGFKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQGFKIT QNPMLITYAKK
Sbjct: 188 LQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQSLQGFKITPQNPMLITYAKK 241
>ref|XP_006294873.1| hypothetical protein CARUB_v10023926mg [Capsella rubella]
gi|482563581|gb|EOA27771.1| hypothetical protein
CARUB_v10023926mg [Capsella rubella]
Length = 247
Score = 379 bits (972), Expect = e-102
Identities = 182/233 (78%), Positives = 202/233 (86%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+KLDELKKSL AVFSQFGKILEVLAFKTLKHKGQAWV+F++ SA+ A
Sbjct: 15 NQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEVLAFKTLKHKGQAWVVFDNADSASTA 74
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+ +M FPFYDK MRIQYAKTKSD++AKADGTFVPRE+RKR +++ +KK+D HHDS Q
Sbjct: 75 IAKMNDFPFYDKRMRIQYAKTKSDVVAKADGTFVPREKRKRQEEKGGKKKKDQHHDSTQM 134
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G +NSAY G YG PPLSQ+PY GG K +LPEAPA PNNILFVQNLPHETTPM+LQM F
Sbjct: 135 GMAMNSAYPGVYGTAPPLSQVPYPGGVKPILPEAPAPPNNILFVQNLPHETTPMVLQMLF 194
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 812
CQY GFKEVRMVEAKPGIAFVE+ DEMQSTVAMQ LQGFKI QN MLITYAKK
Sbjct: 195 CQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQALQGFKIQQNQMLITYAKK 247
>ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 378 bits (971), Expect = e-102
Identities = 191/234 (81%), Positives = 209/234 (89%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEKIK+DELKKSL AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSA+ A
Sbjct: 13 NNTIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+RKRHD++A KKR HDS A
Sbjct: 73 LRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKA--KKRKDQHDSNLA 130
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G GLN AY+GAYGA P ++ Y GG+KSM+PEAPA PNNILF+QNLP+++TPMMLQM F
Sbjct: 131 GMGLNPAYAGAYGAAPAIA---YPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLF 187
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
QYPGFKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQGFKIT QNPMLITYAKK
Sbjct: 188 LQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241
>ref|XP_006444378.1| hypothetical protein CICLE_v10021907mg [Citrus clementina]
gi|568852654|ref|XP_006479987.1| PREDICTED: U1 small
nuclear ribonucleoprotein A-like [Citrus sinensis]
gi|557546640|gb|ESR57618.1| hypothetical protein
CICLE_v10021907mg [Citrus clementina]
Length = 245
Score = 378 bits (970), Expect = e-102
Identities = 182/233 (78%), Positives = 208/233 (89%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+K+D+LK+SL AVF QFG ILE+LAFKTLKHKGQAW++F+DV+SAT A
Sbjct: 15 NNTIYINNLNEKVKIDQLKQSLHAVFKQFGTILEILAFKTLKHKGQAWLVFKDVASATAA 74
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+++MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRH+++ KKR HD+ QA
Sbjct: 75 VEKMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHEEKG--KKRKDQHDANQA 132
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G GLN AY+GAYGA PPLSQ+PY GG+KS++PEAPA PNNILFVQN+PH+TTPM LQMFF
Sbjct: 133 GMGLNPAYAGAYGATPPLSQIPYPGGAKSVIPEAPAPPNNILFVQNVPHDTTPMALQMFF 192
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 812
Q+PGFKEVRMVEAKPGIAFVEYGDEMQ+TVAMQ LQ KI Q +LITYAKK
Sbjct: 193 SQFPGFKEVRMVEAKPGIAFVEYGDEMQATVAMQSLQSLKIGQQQLLITYAKK 245
>ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata] gi|297326152|gb|EFH56572.1| hypothetical protein
ARALYDRAFT_483938 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 377 bits (969), Expect = e-102
Identities = 182/233 (78%), Positives = 202/233 (86%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+K+DELKKSL AVFSQFGKILE+LAFKTLKHKGQAWV+F++ SA+ A
Sbjct: 17 NQTIYINNLNEKVKIDELKKSLNAVFSQFGKILEILAFKTLKHKGQAWVVFDNADSASTA 76
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+ +M FPFYDK MRIQYAKTKSD++AKADGTFVPRE+RKRH+++ +KK+D HHDS Q
Sbjct: 77 IAKMNDFPFYDKNMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKGGKKKKDHHHDSTQM 136
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G NSAY G YGA PPLSQ+PY GG K LPEAPA PNNILFVQNLPHETTPM+LQM F
Sbjct: 137 GMATNSAYPGVYGAAPPLSQVPYPGGVKPNLPEAPAPPNNILFVQNLPHETTPMVLQMLF 196
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 812
QY GFKEVRMVEAKPGIAFVE+ DEMQSTVAMQGLQGFKI QN MLITYAKK
Sbjct: 197 YQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQGLQGFKIQQNQMLITYAKK 249
>ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1
small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A gi|1050430|emb|CAA90283.1| U1snRNP-specific
protein [Arabidopsis thaliana] gi|2529669|gb|AAC62852.1|
small nuclear ribonucleoprotein U1A [Arabidopsis
thaliana] gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|16649011|gb|AAL24357.1| small
nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear
ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|330255767|gb|AEC10861.1|
spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 377 bits (968), Expect = e-102
Identities = 181/234 (77%), Positives = 203/234 (86%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEK+KLDELKKSL AVFSQFGKILE+LAFKT KHKGQAWV+F++ SA+ A
Sbjct: 17 NQTIYINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHKGQAWVVFDNTESASTA 76
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAE-RKKRDPHHDSKQ 470
+ +M FPFYDK MRIQYAKTKSD++AKADGTFVPRE+RKRH+++ +KK+D HHDS Q
Sbjct: 77 IAKMNNFPFYDKEMRIQYAKTKSDVVAKADGTFVPREKRKRHEEKGGGKKKKDQHHDSTQ 136
Query: 471 AGAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMF 650
G +NSAY G YGA PPLSQ+PY GG K +PEAPA PNNILFVQNLPHETTPM+LQM
Sbjct: 137 MGMPMNSAYPGVYGAAPPLSQVPYPGGMKPNMPEAPAPPNNILFVQNLPHETTPMVLQML 196
Query: 651 FCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 812
FCQY GFKEVRM+EAKPGIAFVE+ DEMQSTVAMQGLQGFKI QN MLITYAKK
Sbjct: 197 FCQYQGFKEVRMIEAKPGIAFVEFADEMQSTVAMQGLQGFKIQQNQMLITYAKK 250
>gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 376 bits (966), Expect = e-102
Identities = 190/234 (81%), Positives = 208/234 (88%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N IYINNLNEKIK+DELKKSL AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSA+ A
Sbjct: 13 NNAIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
L++MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+RKRHD++A KKR HDS A
Sbjct: 73 LRQMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDEKA--KKRKDQHDSNLA 130
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G GLN AY+GAYGA P ++ Y GG+KSM+PEAPA PNNILF+QNLP+++TPMMLQM F
Sbjct: 131 GMGLNPAYAGAYGAAPAIA---YPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLF 187
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
QYPGFKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQGFKIT QNPMLITYAKK
Sbjct: 188 LQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241
>ref|XP_002302719.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 375 bits (964), Expect = e-101
Identities = 182/233 (78%), Positives = 204/233 (87%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIK+DELKK+L AVFSQFGKILE+LAFKTLKHKGQAWV+FEDV SA+ A
Sbjct: 21 NMTIYINNLNEKIKIDELKKALHAVFSQFGKILEILAFKTLKHKGQAWVVFEDVQSASNA 80
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+++MQ FPFYDKPMRIQYAKTKSDI+AKADGTFVPRE+R+RH+++ ++KK HD+ Q
Sbjct: 81 MRQMQSFPFYDKPMRIQYAKTKSDIVAKADGTFVPREKRRRHEEKGKKKK--DQHDTNQV 138
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G GL AY GAYG PPLSQ+PY GG KSM+PEAPA PNNILF+QNLP+ETT MMLQM F
Sbjct: 139 GVGLTPAYGGAYGTTPPLSQIPYLGGVKSMVPEAPAPPNNILFIQNLPNETTTMMLQMLF 198
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKITQNPMLITYAKK 812
QY GFKEVRMVE KPGIAFVEYGDEMQSTVAM LQGFK+ QN MLITYAKK
Sbjct: 199 QQYAGFKEVRMVETKPGIAFVEYGDEMQSTVAMHALQGFKLQQNSMLITYAKK 251
>ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarpa]
gi|118485733|gb|ABK94716.1| unknown [Populus
trichocarpa] gi|550324046|gb|EEE98652.2| SPLICEOSOMAL
protein U1A [Populus trichocarpa]
Length = 254
Score = 374 bits (960), Expect = e-101
Identities = 186/234 (79%), Positives = 204/234 (87%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
NMTIYINNLNEKIK+DELK SL AVFSQFGKILE+LAFKTLKHKGQAWVIFEDV SA+ A
Sbjct: 23 NMTIYINNLNEKIKIDELKTSLHAVFSQFGKILEILAFKTLKHKGQAWVIFEDVQSASNA 82
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+++MQ FPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+R+RH+++ ++KK HD+ Q
Sbjct: 83 IRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRRRHEEKGKKKK--DQHDANQV 140
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G GL AY GAYG P L Q+PY GG KSM+PEAPA PNNILF+QNLP+ETTPMMLQM F
Sbjct: 141 GVGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNNILFIQNLPNETTPMMLQMLF 200
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKI-TQNPMLITYAKK 812
QYPGFKEVRMVEAKPGIAFVEYGDEMQST AM GLQGFKI QN MLITYAKK
Sbjct: 201 QQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKILQQNSMLITYAKK 254
>ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
gi|255628437|gb|ACU14563.1| unknown [Glycine max]
Length = 241
Score = 374 bits (959), Expect = e-101
Identities = 189/232 (81%), Positives = 207/232 (89%), Gaps = 1/232 (0%)
Frame = +3
Query: 120 TIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEALK 299
TIYINNLNEKIK+DELKKSL AVF+QFGKILEVLAFKTLKHKGQAWV+FED SSA+ AL+
Sbjct: 15 TIYINNLNEKIKIDELKKSLNAVFTQFGKILEVLAFKTLKHKGQAWVVFEDASSASNALR 74
Query: 300 RMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQAGA 479
+MQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRE+RKRHDD+A KKR HD+ AG
Sbjct: 75 QMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPREKRKRHDDKA--KKRKDQHDANLAGM 132
Query: 480 GLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFFCQ 659
GLN AY+GAYGA P ++ Y GG+KSM+PEAPA PNNILF+QNLP+++TPMMLQM F Q
Sbjct: 133 GLNPAYAGAYGAAPAIA---YPGGAKSMVPEAPAPPNNILFIQNLPNDSTPMMLQMLFLQ 189
Query: 660 YPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
YPGFKEVRMVE KPGIAFVEYGDEMQSTVAMQ LQ FKIT QNPMLITYAKK
Sbjct: 190 YPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQCFKITPQNPMLITYAKK 241
>ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
vesca subsp. vesca]
Length = 244
Score = 373 bits (957), Expect = e-101
Identities = 185/234 (79%), Positives = 204/234 (87%), Gaps = 1/234 (0%)
Frame = +3
Query: 114 NMTIYINNLNEKIKLDELKKSLRAVFSQFGKILEVLAFKTLKHKGQAWVIFEDVSSATEA 293
N TIYINNLNEKIKLDELKK+L A+FSQFGK+L+VLAFKTLKHKGQAWV+FEDVSSAT A
Sbjct: 13 NQTIYINNLNEKIKLDELKKTLHAMFSQFGKVLDVLAFKTLKHKGQAWVVFEDVSSATNA 72
Query: 294 LKRMQGFPFYDKPMRIQYAKTKSDIIAKADGTFVPRERRKRHDDRAERKKRDPHHDSKQA 473
+++MQ FPFYDKPM+IQYAKTKSDIIAKADGTFVPRERRKRH+++ +KR D+ QA
Sbjct: 73 IRQMQSFPFYDKPMKIQYAKTKSDIIAKADGTFVPRERRKRHEEKG--RKRKEQQDANQA 130
Query: 474 GAGLNSAYSGAYGAVPPLSQLPYGGGSKSMLPEAPALPNNILFVQNLPHETTPMMLQMFF 653
G LN AY GAYG PPLSQ+PY GG KSM+PEAPA PNNILFVQNLPHE T MLQM F
Sbjct: 131 GMVLNPAYPGAYGGAPPLSQIPYPGGVKSMVPEAPAPPNNILFVQNLPHEATSAMLQMLF 190
Query: 654 CQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGFKIT-QNPMLITYAKK 812
CQYPGFKEVRMVEAKPGIAFVEY +EMQST+AMQ LQ FK+T QN MLITYAKK
Sbjct: 191 CQYPGFKEVRMVEAKPGIAFVEYENEMQSTMAMQNLQAFKVTPQNSMLITYAKK 244