BLASTX nr result
ID: Zingiber25_contig00000680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00000680
(1738 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A... 350 1e-93
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264... 337 1e-89
emb|CBI29694.3| unnamed protein product [Vitis vinifera] 337 1e-89
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu... 333 1e-88
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5... 333 1e-88
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts... 333 1e-88
gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 330 1e-87
ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts... 323 1e-85
gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, pa... 323 2e-85
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts... 322 4e-85
gb|EMJ27362.1| hypothetical protein PRUPE_ppa015218mg [Prunus pe... 316 2e-83
gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 316 2e-83
gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 316 2e-83
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 315 3e-83
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 315 4e-83
ref|XP_003579808.1| PREDICTED: uncharacterized protein LOC100844... 315 4e-83
dbj|BAJ94892.1| predicted protein [Hordeum vulgare subsp. vulgare] 310 2e-81
gb|EXB88206.1| hypothetical protein L484_011635 [Morus notabilis] 309 2e-81
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu... 308 5e-81
ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263... 306 2e-80
>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
gi|548862693|gb|ERN20051.1| hypothetical protein
AMTR_s00071p00188270 [Amborella trichopoda]
Length = 599
Score = 350 bits (897), Expect = 1e-93
Identities = 217/534 (40%), Positives = 293/534 (54%), Gaps = 40/534 (7%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MKD RTKV VRRLPP++ Q AL+++IDS+F+GRY+W FR GKNS K+QRHSR YI+F
Sbjct: 1 MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
KRPEDV+EFAEFF GH+FVNEKG QFK +VEYAPSQRVPKPW KKDG EGTI KD EY+E
Sbjct: 61 KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSS 794
FLE ++KP E LPSAEIQLER+EAERAGA+KE IVTPLMDFVR+KRAAK G R S +
Sbjct: 121 FLEFLAKPAENLPSAEIQLERREAERAGASKESLIVTPLMDFVRQKRAAKSGTLRSSANG 180
Query: 795 KV-XXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKE--- 962
K E+R+++TS VLRD K +SKDK TY L+ R++
Sbjct: 181 KTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQK 240
Query: 963 --DNQSAVGKSISVLSTMEKETQEIEFDPGVVG----SENDRLVLLKVKEKEXXXXXXXX 1124
DN SAV + ++ + VG S +++LLK K++E
Sbjct: 241 LPDNSSAVSALAGPEALDDESVGVADVTAATVGGTLESGKKKVLLLKGKDREASQASGSV 300
Query: 1125 XXXXXXXXXXKN-------------HASGKIIRSIL-RKEGRMDQSYISTTHTEQLMDMA 1262
+N + ++++SIL K+GR +++ T +QL ++
Sbjct: 301 VQQQTVSSPIRNLSGSAPFRQSQRRDGNSRMVKSILSNKDGRQVPAHVLTQTEQQLQGLS 360
Query: 1263 KVEYKHPPRSPSADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDR 1442
+ K PPR S L SKD K D ++ +G V ++K ++
Sbjct: 361 LEKDKRPPRPNSTRLASKDHLSGYLMPTSMSDSDPKKALDQKITGNDSYGLVPANEKQEK 420
Query: 1443 RTRNKEMPDHGVWAPLHHPVRSQSNDGIPSSSEDAQGLANSFK---------------SF 1577
RTRNK+ PD VW PL + D +S+ + L+N+ + +
Sbjct: 421 RTRNKDRPDRAVWTPLRRSDGIHTVDESQMTSDSLEKLSNAQELKLGDDTEECDGLGSNA 480
Query: 1578 FSQRASRKIEEIAIQNASIGQSNNLAFYETSLGHGERKTNVSSA-RSEGMKVHG 1736
S + ++ N+ G+ + + E SL G+ K + SSA RS MK G
Sbjct: 481 SSSMGKSRTSDLGYHNSRSGRGASSSSSEHSLNQGDTKFDTSSASRSLEMKTQG 534
>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
lycopersicum]
Length = 485
Score = 337 bits (863), Expect = 1e-89
Identities = 205/496 (41%), Positives = 275/496 (55%), Gaps = 17/496 (3%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MK R+KV +R LPP++ Q+ L+DQ+DS+FAGRY+WFCF GK+SQK Q +SRAYI F
Sbjct: 1 MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
KRPEDV+EFAEFFDGH+FVNEKG QFK +VEYAPSQRVP+ W KKDG EGTILKD EY+E
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPQHWSKKDGREGTILKDPEYLE 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQR-LSGS 791
FLE ISKP+E LPSAEIQLERKEAERAG+ K+ PIVTPLMD++R+KRAAK G ++ ++
Sbjct: 121 FLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANG 180
Query: 792 SKVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQ 971
EKRR +T+ VLRD K + KDK TY+L +++D Q
Sbjct: 181 RPTRRASGTSAGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQ 239
Query: 972 SAVGKSISVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEKEXXXXXXXXXXXXXXXXX 1151
A S ++ +E VG + +++LLK KEKE
Sbjct: 240 RAEKSGTSAPGSVANAVEEETGGAADVGKK--KILLLKEKEKE-------------NPNN 284
Query: 1152 XKNHASGKIIRSILRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSPSADLNSKDLTHY 1331
+ ASG+IIRSIL K+ R +Q+ ++ + +D + K PPR PS L ++
Sbjct: 285 QRREASGRIIRSILLKDARQNQAPSASQQEKHRVD----KDKKPPRPPSVQLFQRE---- 336
Query: 1332 XXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGVWAPLHHPVRSQ 1511
N +D + + H V ++K ++RTR ++ PD GVW PL
Sbjct: 337 -----------TNGANEDRVLGADLH--VVHTEKQEKRTRIRDRPDRGVWTPLRRSDSLH 383
Query: 1512 SNDGIPSSS----------------EDAQGLANSFKSFFSQRASRKIEEIAIQNASIGQS 1643
++D SSS E GL N+ + F S + + N +
Sbjct: 384 ASDESLSSSASQSSEVPDFVEGSPGETKHGLVNARVAEFRPMGSGRNSHSSFDNGTYKHG 443
Query: 1644 NNLAFYETSLGHGERK 1691
+ + GE K
Sbjct: 444 GRRGMRDDGISVGEGK 459
>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 337 bits (863), Expect = 1e-89
Identities = 215/474 (45%), Positives = 273/474 (57%), Gaps = 21/474 (4%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MK RTKV VR LPP++ +AA ++QID+ F GRY FR GKNSQK Q +SRAY++F
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
KRPEDV+EFAEFFDGH+FVNEKG QFK +VEYAPSQR+PK W KKDG EGTI KD EYME
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQR--LSG 788
F+EL++KPVE LPSAEIQLER+EAERAGA K+ PIVTPLMDFVR+KRAAK GV R LS
Sbjct: 121 FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAK-GVSRRSLSN 179
Query: 789 SSKVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDN 968
EKRR++T+ VLRD K ++KDK T++L+ K D+
Sbjct: 180 GKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVP-KRDD 238
Query: 969 QSAVGKSISVLSTMEKETQEIEFD-PGVVGSENDRLVLLKVKEKE---------XXXXXX 1118
Q KS+++ + E E E G V + +++LLK KE+E
Sbjct: 239 QLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKKKVLLLKGKEREISHHLLQQNVTSPVK 298
Query: 1119 XXXXXXXXXXXXKNHASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVE-YKHPPRS 1292
+ SG+IIRSI L K+ R QS S TEQ + +E K PPR
Sbjct: 299 NILGANAPKQNQRREGSGRIIRSILLNKDARQSQS--SMFQTEQQSQASNLEKEKRPPRP 356
Query: 1293 PSADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDH 1472
P L SK+ N DD V ++ H V S+K D+RTRNK+ PD
Sbjct: 357 PHIQLASKE---------------TNGAQDDKVVGNDVHSFV--SEKQDKRTRNKDRPDR 399
Query: 1473 GVWAPLHHPVRSQSND-------GIPSSSEDAQGLANSFKSFFSQRASRKIEEI 1613
GVW PL S ++D P+SS+ +G +S S S +++ +
Sbjct: 400 GVWTPLRRSDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSGEVKAL 453
>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
gi|550341819|gb|ERP62848.1| hypothetical protein
POPTR_0004s23450g [Populus trichocarpa]
Length = 520
Score = 333 bits (855), Expect = 1e-88
Identities = 207/488 (42%), Positives = 278/488 (56%), Gaps = 15/488 (3%)
Frame = +3
Query: 273 RTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINFKRPEDV 452
+TKV VR LPP + Q V+QID F+GRY+W +R G NSQK Q +SRAYI+FKRPEDV
Sbjct: 9 KTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPEDV 68
Query: 453 VEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYMEFLELIS 632
++FAEFF+GHIFVNEKG QFK +VEY+PSQRVPK W KKDG EGTI KD EY+EFLELI+
Sbjct: 69 IDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELIA 128
Query: 633 KPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSSKVXXXX 812
KPVE LPSAEIQLER+EAERAGA K+ PIVTPLMDFVR+KR AK+G +R+ + K+
Sbjct: 129 KPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKL-SRR 187
Query: 813 XXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQSAVGKSI 992
EK+R++T+ VLRD K + KDK TY+ + +++D Q + ++
Sbjct: 188 AGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVTL 247
Query: 993 -SVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEKEXXXXXXXXXXXXXXXXXXKN--- 1160
S T E + + G+ S +++LLK KEKE +N
Sbjct: 248 GSGSGTAVLEDESVV--SGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIIS 305
Query: 1161 ---------HASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVE-YKHPPRSPSADL 1307
SG++IRSI L K+ R +S S H+E M + +E K PPR P A L
Sbjct: 306 STALKSQRRETSGRMIRSILLNKDSRHIRS--SGVHSEPQMQTSNLEKEKRPPRPPHAQL 363
Query: 1308 NSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGVWAP 1487
KD N DD V ++ HG ++K ++RTRNK+ PD GVW P
Sbjct: 364 GLKD---------------ANGTPDDKVVGNDLHGFP--NEKQEKRTRNKDRPDRGVWTP 406
Query: 1488 LHHPVRSQSNDGIPSSSEDAQGLANSFKSFFSQRASRKIEEIAIQNASIGQSNNLAFYET 1667
L S ++D SS +Q + F S K++ + +++ + + +
Sbjct: 407 LRRSDGSYASDESLLSSA-SQSTQSVFDSSQGNHGDVKVDSLNLRSGEVKVLGSGRGNHS 465
Query: 1668 SLGHGERK 1691
SL +G K
Sbjct: 466 SLDNGSHK 473
>ref|XP_002328787.1| predicted protein [Populus trichocarpa]
gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family
protein [Populus trichocarpa] gi|550341820|gb|ERP62849.1|
Smg-4/UPF3 family protein [Populus trichocarpa]
Length = 527
Score = 333 bits (855), Expect = 1e-88
Identities = 207/488 (42%), Positives = 278/488 (56%), Gaps = 15/488 (3%)
Frame = +3
Query: 273 RTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINFKRPEDV 452
+TKV VR LPP + Q V+QID F+GRY+W +R G NSQK Q +SRAYI+FKRPEDV
Sbjct: 9 KTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPEDV 68
Query: 453 VEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYMEFLELIS 632
++FAEFF+GHIFVNEKG QFK +VEY+PSQRVPK W KKDG EGTI KD EY+EFLELI+
Sbjct: 69 IDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELIA 128
Query: 633 KPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSSKVXXXX 812
KPVE LPSAEIQLER+EAERAGA K+ PIVTPLMDFVR+KR AK+G +R+ + K+
Sbjct: 129 KPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKL-SRR 187
Query: 813 XXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQSAVGKSI 992
EK+R++T+ VLRD K + KDK TY+ + +++D Q + ++
Sbjct: 188 AGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVTL 247
Query: 993 -SVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEKEXXXXXXXXXXXXXXXXXXKN--- 1160
S T E + + G+ S +++LLK KEKE +N
Sbjct: 248 GSGSGTAVLEDESVV--SGITDSGKKKILLLKGKEKEISLVTGTMSQQQSISSSDRNIIS 305
Query: 1161 ---------HASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVE-YKHPPRSPSADL 1307
SG++IRSI L K+ R +S S H+E M + +E K PPR P A L
Sbjct: 306 STALKSQRRETSGRMIRSILLNKDSRHIRS--SGVHSEPQMQTSNLEKEKRPPRPPHAQL 363
Query: 1308 NSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGVWAP 1487
KD N DD V ++ HG ++K ++RTRNK+ PD GVW P
Sbjct: 364 GLKD---------------ANGTPDDKVVGNDLHGFP--NEKQEKRTRNKDRPDRGVWTP 406
Query: 1488 LHHPVRSQSNDGIPSSSEDAQGLANSFKSFFSQRASRKIEEIAIQNASIGQSNNLAFYET 1667
L S ++D SS +Q + F S K++ + +++ + + +
Sbjct: 407 LRRSDGSYASDESLLSSA-SQSTQSVFDSSQGNHGDVKVDSLNLRSGEVKVLGSGRGNHS 465
Query: 1668 SLGHGERK 1691
SL +G K
Sbjct: 466 SLDNGSHK 473
>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
tuberosum]
Length = 483
Score = 333 bits (854), Expect = 1e-88
Identities = 203/496 (40%), Positives = 273/496 (55%), Gaps = 17/496 (3%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MK R+KV +R LPP++ Q+ L+DQ+DS+FAGRY+WFCF GK+SQK Q +SRAYI F
Sbjct: 1 MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
K PEDV+EFAEFFDGH+FVNEKG QFK +VEYAPSQRVPK W KKDG EGTILKD EY+E
Sbjct: 61 KMPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKHWSKKDGREGTILKDPEYLE 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQR-LSGS 791
FLE ISKP+E LPSAEIQLERKEAERAG+ K+ PIVTPLMD++R+KRAAK G ++ ++
Sbjct: 121 FLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANG 180
Query: 792 SKVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQ 971
EKRR +T+ VLRD K + KDK TY+L +++D Q
Sbjct: 181 RPTRRTSGTSTGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQ 239
Query: 972 SAVGKSISVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEKEXXXXXXXXXXXXXXXXX 1151
A S ++ +E VG + +++LLK KE
Sbjct: 240 RAEKSGTSAAGSVANAVEEETGGAADVGKK--KILLLKEKEN---------------PNN 282
Query: 1152 XKNHASGKIIRSILRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSPSADLNSKDLTHY 1331
+ ASG+IIRSIL K+ R +Q+ ++ + +D + K PPR PS L ++
Sbjct: 283 QRREASGRIIRSILLKDARQNQAPSASQQDKHRVD----KDKKPPRPPSVQLFQRE---- 334
Query: 1332 XXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGVWAPLHHPVRSQ 1511
N +D + + H + ++K ++RTR ++ PD GVW PL
Sbjct: 335 -----------TNGANEDKVLGADLH--IVHTEKQEKRTRIRDRPDRGVWTPLRRSDSLH 381
Query: 1512 SNDGIPSSS----------------EDAQGLANSFKSFFSQRASRKIEEIAIQNASIGQS 1643
++D SSS E GLAN+ + F S + + N +
Sbjct: 382 ASDESLSSSASQSSEVPDFVEGSQGETKHGLANARGAEFRPMGSGRNSYSSFDNGTYKHG 441
Query: 1644 NNLAFYETSLGHGERK 1691
+ + GE K
Sbjct: 442 GRRGMRDDGISVGEGK 457
>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
Length = 514
Score = 330 bits (846), Expect = 1e-87
Identities = 215/500 (43%), Positives = 280/500 (56%), Gaps = 17/500 (3%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MK RTKV +R LPP++ +A LV+Q+D+ F+GRY+W FR GK+SQK Q +SRAYI+F
Sbjct: 1 MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
KR EDV+EFAEFF+GH+FVNEKG QFK +VEYAPSQRVPK KKDG EGTILKDLEY+E
Sbjct: 61 KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEYLE 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQR-LSGS 791
FLE + KPVE LPSAEIQLERKEAERAG K+ PIVTPLMDFVR+KRAAK G +R LS
Sbjct: 121 FLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNG 180
Query: 792 SKVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQ 971
EKRR +T+ VLRD +K + KDK TY+L+S K D Q
Sbjct: 181 KLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVS-KRDEQ 239
Query: 972 SAVGKSISVLSTMEKETQEIEFD-PGVVGSENDRLVLLKVKEKEXXXXXXXXXXXXXXXX 1148
K +++ S+M E E E PG+ + +++LLK KEKE
Sbjct: 240 QLSDKHVALASSMGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVLHQQNVTS 299
Query: 1149 XXK-----------NHASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVEY-KHPPR 1289
K + G++IR I L K+ R +QS S +EQ + + +E + PPR
Sbjct: 300 PIKTILGSTPTKQNSRREGRMIRGILLNKDARQNQS--SGVQSEQQIRTSNLEKDRRPPR 357
Query: 1290 SPSADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPD 1469
+ L KD N +DD V ++ HG S+K +RR RNK+ PD
Sbjct: 358 HSHSHLVLKD---------------TNTASDDKVVGNDLHG----SEKPERRCRNKDRPD 398
Query: 1470 HGVWAPLHHPVRSQSNDGIPSSSEDAQGL--ANSFKSFFSQRASRKIEEIAIQNASIGQS 1643
GVW L S ++D SSS L + + + ++Q ++G
Sbjct: 399 RGVWT-LRRSDGSYASDESMSSSASQSALIPLDPLEGTYGDTKVDLSNVRSVQVKTVGSG 457
Query: 1644 NNLAFYETSLGHGERKTNVS 1703
N +SL +G +VS
Sbjct: 458 RN-----SSLDNGSHNKHVS 472
>ref|XP_006339925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
[Solanum tuberosum]
Length = 482
Score = 323 bits (828), Expect = 1e-85
Identities = 195/434 (44%), Positives = 255/434 (58%), Gaps = 11/434 (2%)
Frame = +3
Query: 273 RTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINFKRPEDV 452
RTKV +R LPP++ Q+ L++ +DS+FAGRY+WF FR K S K Q +S+AYI+F+ EDV
Sbjct: 5 RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDV 64
Query: 453 VEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYMEFLELIS 632
EFAEFFDGH+FVNEKG QFK +VEYAPSQRVPK WLKKD EGTILKD YMEFLE ++
Sbjct: 65 TEFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLA 124
Query: 633 KPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSSKVXXXX 812
KPVE LPSAEIQLERKEAERAG+ K+ PIVTPLMD+VR+KRA K G +R + K
Sbjct: 125 KPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSV 184
Query: 813 XXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQSAVGKSI 992
++R +T+ V RD K SKDK +Y+L+ ++ D Q +
Sbjct: 185 GGTSSRSPSSTASRRGSEKRTSTTMYVQRDSSKAGNSKDK-SYILLPKRGDQQ------L 237
Query: 993 SVLSTMEKETQEIEFDPGVVG------SENDRLVLLKVKEKEXXXXXXXXXXXXXXXXXX 1154
SV S EI+ G +G S +++LLK KEKE
Sbjct: 238 SVKSGSSAPGSEIDVVEGEIGRSVTADSGKKKILLLKGKEKE-------------GPNNQ 284
Query: 1155 KNHASGKIIRSILRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSPSADLNSKDLTHYX 1334
+ ASG+IIRSIL K+ R +Q S ++Q+ D + PPR PS L KD +
Sbjct: 285 RQEASGRIIRSILLKDARQNQ---SAFQSDQIQD----KDMRPPRPPSMQLFQKDTSG-- 335
Query: 1335 XXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGVWAPLHHPVRSQS 1514
++ V+ N+ V I +K +RR+RN++ PD GVWAPL SQ+
Sbjct: 336 --------------ANEDKVVGNEKHVVHI-EKQERRSRNRDRPDRGVWAPLRRADSSQA 380
Query: 1515 ND-----GIPSSSE 1541
++ GIP SS+
Sbjct: 381 SNGSLSSGIPQSSQ 394
>gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
cacao]
Length = 440
Score = 323 bits (827), Expect = 2e-85
Identities = 207/456 (45%), Positives = 262/456 (57%), Gaps = 22/456 (4%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MK RTKV +R LPP++ +A LV+Q+D+ F+GRY+W FR GK+SQK Q +SRAYI+F
Sbjct: 1 MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILK------ 596
KR EDV+EFAEFF+GH+FVNEKG QFK +VEYAPSQRVPK KKDG EGTILK
Sbjct: 61 KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKVFLDEH 120
Query: 597 -DLEYMEFLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGV 773
DLEY+EFLE + KPVE LPSAEIQLERKEAERAG K+ PIVTPLMDFVR+KRAAK G
Sbjct: 121 LDLEYLEFLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGS 180
Query: 774 QR-LSGSSKVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLM 950
+R LS EKRR +T+ VLRD +K + KDK TY+L+
Sbjct: 181 RRSLSNGKLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILV 240
Query: 951 SRKEDNQSAVGKSISVLSTMEKETQEIEFD-PGVVGSENDRLVLLKVKEKEXXXXXXXXX 1127
S K D Q K +++ S+M E E E PG+ + +++LLK KEKE
Sbjct: 241 S-KRDEQQLSDKHVALASSMGTEISEEESGVPGITDAVKKKVLLLKGKEKEISPVAGNVL 299
Query: 1128 XXXXXXXXXK-----------NHASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVE 1271
K + G++IR I L K+ R +QS S +EQ + + +E
Sbjct: 300 HQQNVTSPIKTILGSTPTKQNSRREGRMIRGILLNKDARQNQS--SGVQSEQQIRTSNLE 357
Query: 1272 Y-KHPPRSPSADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRT 1448
+ PPR + L KD N +DD V ++ HG S+K +RR
Sbjct: 358 KDRRPPRHSHSHLVLKD---------------TNTASDDKVVGNDLHG----SEKPERRC 398
Query: 1449 RNKEMPDHGVWAPLHHPVRSQSNDGIPSSSEDAQGL 1556
RNK+ PD GVW L S ++D SSS L
Sbjct: 399 RNKDRPDRGVWT-LRRSDGSYASDESMSSSASQSAL 433
>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X2 [Solanum tuberosum]
gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X3 [Solanum
tuberosum]
Length = 508
Score = 322 bits (824), Expect = 4e-85
Identities = 197/447 (44%), Positives = 256/447 (57%), Gaps = 24/447 (5%)
Frame = +3
Query: 273 RTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINFKRPEDV 452
RTKV +R LPP++ Q+ L++ +DS+FAGRY+WF FR K S K Q +S+AYI+F+ EDV
Sbjct: 5 RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDV 64
Query: 453 VEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYMEFLELIS 632
EFAEFFDGH+FVNEKG QFK +VEYAPSQRVPK WLKKD EGTILKD YMEFLE ++
Sbjct: 65 TEFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLA 124
Query: 633 KPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSSKVXXXX 812
KPVE LPSAEIQLERKEAERAG+ K+ PIVTPLMD+VR+KRA K G +R + K
Sbjct: 125 KPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSV 184
Query: 813 XXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQSAVGKSI 992
++R +T+ V RD K SKDK +Y+L+ ++ D Q +
Sbjct: 185 GGTSSRSPSSTASRRGSEKRTSTTMYVQRDSSKAGNSKDK-SYILLPKRGDQQ------L 237
Query: 993 SVLSTMEKETQEIEFDPGVVG------SENDRLVLLKVKEKEXXXXXXXXXXXXXXXXXX 1154
SV S EI+ G +G S +++LLK KEKE
Sbjct: 238 SVKSGSSAPGSEIDVVEGEIGRSVTADSGKKKILLLKGKEKEGPNVSGGSLAQQNVSSAL 297
Query: 1155 KN-------------HASGKIIRSILRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSP 1295
KN ASG+IIRSIL K+ R +Q S ++Q+ D + PPR P
Sbjct: 298 KNSPSLSALKQNQRQEASGRIIRSILLKDARQNQ---SAFQSDQIQD----KDMRPPRPP 350
Query: 1296 SADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHG 1475
S L KD + ++ V+ N+ V I +K +RR+RN++ PD G
Sbjct: 351 SMQLFQKDTSG----------------ANEDKVVGNEKHVVHI-EKQERRSRNRDRPDRG 393
Query: 1476 VWAPLHHPVRSQSND-----GIPSSSE 1541
VWAPL SQ+++ GIP SS+
Sbjct: 394 VWAPLRRADSSQASNGSLSSGIPQSSQ 420
>gb|EMJ27362.1| hypothetical protein PRUPE_ppa015218mg [Prunus persica]
Length = 467
Score = 316 bits (810), Expect = 2e-83
Identities = 194/452 (42%), Positives = 253/452 (55%), Gaps = 13/452 (2%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MKD RTKV VR LPPS+ + L+ QID + A RY+WFCFR GKNSQK+QR+SRAYI+F
Sbjct: 1 MKDPLVRTKVLVRHLPPSLSHSDLLQQIDHQLADRYNWFCFRPGKNSQKNQRYSRAYIDF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
KRPEDV EFAEFFDGH+FVNEKG QFK +VEYAPSQRVPKP KKDG EGTI KD +Y+E
Sbjct: 61 KRPEDVFEFAEFFDGHVFVNEKGSQFKAIVEYAPSQRVPKPCTKKDGREGTIYKDPDYLE 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSS 794
FL+LI+KPVE LPSAEIQLERKEAE+AG KE PI+TPLM++VR+KRA G Q S
Sbjct: 121 FLKLIAKPVEHLPSAEIQLERKEAEQAGGAKEPPIITPLMEYVRQKRAIGSGTQVSSVVR 180
Query: 795 KVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQS 974
KV KR +L+D K + KDK T+ ++ R+ED Q
Sbjct: 181 KVRRRAGAASLNKRGSTST----KRVSEKKKYILKDSAKHTSRKDKSTFTVVPRRED-QL 235
Query: 975 AVGKSISVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEKEXXXXXXXXXXXXXXXXXX 1154
A S+S + P + S +++LLK KE+E
Sbjct: 236 ASSSSVSGI-------------PVIADSGKKKILLLKGKEREIPSAPEGMLPQGSVTSAG 282
Query: 1155 -----------KNHASGKIIRSIL-RKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSPS 1298
+ A GK+IR+IL EGR QS ++++ + + K R +
Sbjct: 283 SYVSAAPKQNQRREAGGKLIRNILLNNEGRQSQSSTEIQPQQKILSLNS-DVKRASRPSN 341
Query: 1299 ADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGV 1478
A L + T D + HG+ ++S+K ++ TRNK+ PD GV
Sbjct: 342 ARLGLNGQVSNNEPNSMSSEGDRKRATVDKFSKKDLHGTTNVSEKQEKHTRNKDRPDRGV 401
Query: 1479 WAPLHHPVRSQSND-GIPSSSEDAQGLANSFK 1571
WAPL S ++D +PS + Q ++SF+
Sbjct: 402 WAPLRRADSSHASDEHLPSVPQRPQLPSDSFE 433
>gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 485
Score = 316 bits (809), Expect = 2e-83
Identities = 195/454 (42%), Positives = 261/454 (57%), Gaps = 17/454 (3%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
+KD RTKV +R LPPS+ Q +LV+QID F+GRY+W FR GK SQK+ +SRAYI+
Sbjct: 2 LKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDL 61
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
KRPEDV+EFAEFFDGH+FVNEKG QFKV+VEYAPSQRVPK W KKDG EGTI +D EY+E
Sbjct: 62 KRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLE 121
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQR-LSGS 791
FLE ++KP E LPSAEIQLER+EAER+GA K+ PIVTPLMDFVR+KRA+K G +R L+
Sbjct: 122 FLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNG 181
Query: 792 SKVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQ 971
E++R + + VLRD K ++KDK TY+L+ +++D Q
Sbjct: 182 KTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQ 241
Query: 972 SAVGKSISVLSTMEKETQEIEFDPGVVGSE--NDRLVLLKVKEKE-----------XXXX 1112
+ KS+++ S T +E + GV G++ +++LLK KE+E
Sbjct: 242 PS-EKSVTLASA--AGTHVLEEESGVSGADAVKKKILLLKGKEREITHVPANMSQQQSSS 298
Query: 1113 XXXXXXXXXXXXXXKNHASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPR 1289
+ +G+IIR I L K+ R QS +Q+ K PPR
Sbjct: 299 AKNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQS-SGIYSAQQIQTSNSDRDKRPPR 357
Query: 1290 SPSADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNK-HGSVSISKKHDRRTRNKEMP 1466
S L KD D +++ N HG S+K ++R RNKE P
Sbjct: 358 SQHVQLILKD----------------TNGAPDYNIVGNDLHG--ICSEKQEKRIRNKERP 399
Query: 1467 DHGVWAPLHH-PVRSQSNDGIPSSSEDAQGLANS 1565
D VW PL+ S S++ + S+ + A L +S
Sbjct: 400 DRVVWTPLNRLDGSSASDESLSSAFQPAHSLLDS 433
>gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
Length = 482
Score = 316 bits (809), Expect = 2e-83
Identities = 195/454 (42%), Positives = 261/454 (57%), Gaps = 17/454 (3%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
+KD RTKV +R LPPS+ Q +LV+QID F+GRY+W FR GK SQK+ +SRAYI+
Sbjct: 2 LKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDL 61
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
KRPEDV+EFAEFFDGH+FVNEKG QFKV+VEYAPSQRVPK W KKDG EGTI +D EY+E
Sbjct: 62 KRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLE 121
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQR-LSGS 791
FLE ++KP E LPSAEIQLER+EAER+GA K+ PIVTPLMDFVR+KRA+K G +R L+
Sbjct: 122 FLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNG 181
Query: 792 SKVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQ 971
E++R + + VLRD K ++KDK TY+L+ +++D Q
Sbjct: 182 KTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQ 241
Query: 972 SAVGKSISVLSTMEKETQEIEFDPGVVGSE--NDRLVLLKVKEKE-----------XXXX 1112
+ KS+++ S T +E + GV G++ +++LLK KE+E
Sbjct: 242 PS-EKSVTLASA--AGTHVLEEESGVSGADAVKKKILLLKGKEREITHVPANMSQQQSSS 298
Query: 1113 XXXXXXXXXXXXXXKNHASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPR 1289
+ +G+IIR I L K+ R QS +Q+ K PPR
Sbjct: 299 AKNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQS-SGIYSAQQIQTSNSDRDKRPPR 357
Query: 1290 SPSADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNK-HGSVSISKKHDRRTRNKEMP 1466
S L KD D +++ N HG S+K ++R RNKE P
Sbjct: 358 SQHVQLILKD----------------TNGAPDYNIVGNDLHG--ICSEKQEKRIRNKERP 399
Query: 1467 DHGVWAPLHH-PVRSQSNDGIPSSSEDAQGLANS 1565
D VW PL+ S S++ + S+ + A L +S
Sbjct: 400 DRVVWTPLNRLDGSSASDESLSSAFQPAHSLLDS 433
>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
gi|557533707|gb|ESR44825.1| hypothetical protein
CICLE_v10000901mg [Citrus clementina]
Length = 514
Score = 315 bits (808), Expect = 3e-83
Identities = 193/441 (43%), Positives = 251/441 (56%), Gaps = 13/441 (2%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MK RTKV VR LPP++ Q A +QID F GRY+W FR GK SQK Q +RAY++F
Sbjct: 1 MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
K+PEDV+EFAEFF+GH+FVNEKGVQFK +VEYAPSQRVPK W KKDG EGT+LKD EY+E
Sbjct: 61 KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSS 794
FLE ISKPVE LPSAEIQLER+EAERAGA KE IVTPLMDFVR+KRAAK G +RL +
Sbjct: 121 FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180
Query: 795 KV-XXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQ 971
K+ +K++ +T+ VLRD K + KDK TY+L+ +++D
Sbjct: 181 KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240
Query: 972 SAVGKSISVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEKE-----------XXXXXX 1118
S S + E +E G + +++LLK KE+E
Sbjct: 241 FDKPVSSSSATGSEVVLEESGVPANSDGGKK-KVLLLKGKEREISQVSGSVSHQQSASVK 299
Query: 1119 XXXXXXXXXXXXKNHASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSP 1295
+ SG+IIR I L K+ R +Q+ S H+EQ + + + K PPR
Sbjct: 300 TIISSPALKQNQRRENSGRIIRGILLNKDARQNQA--SGLHSEQQISNLEKD-KRPPRPS 356
Query: 1296 SADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHG 1475
L KD N +DD ++++ H S+K +RRTRNK+ PD
Sbjct: 357 HVQLVMKD---------------TNGVSDDKVIVNDLH-----SEKQERRTRNKDRPDRA 396
Query: 1476 VWAPLHHPVRSQSNDGIPSSS 1538
W QS++ + SS+
Sbjct: 397 AWTLRRSDGSYQSDESLSSSA 417
>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
sinensis]
Length = 514
Score = 315 bits (807), Expect = 4e-83
Identities = 193/441 (43%), Positives = 251/441 (56%), Gaps = 13/441 (2%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MK RTKV VR LPP++ Q A +QID F GRY+W FR GK SQK Q +RAY++F
Sbjct: 1 MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
K+PEDV+EFAEFF+GH+FVNEKGVQFK +VEYAPSQRVPK W KKDG EGT+LKD EY+E
Sbjct: 61 KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSS 794
FLE ISKPVE LPSAEIQLER+EAERAGA KE IVTPLMDFVR+KRAAK G +RL +
Sbjct: 121 FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180
Query: 795 KV-XXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQ 971
K+ +K++ +T+ VLRD K + KDK TY+L+ +++D
Sbjct: 181 KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240
Query: 972 SAVGKSISVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEKE-----------XXXXXX 1118
S S + E +E G + +++LLK KE+E
Sbjct: 241 FDKPVSSSSATGSEVVLEESGVPANSDGGKK-KVLLLKGKEREISQVSGSVSHQQSASVK 299
Query: 1119 XXXXXXXXXXXXKNHASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSP 1295
+ SG+IIR I L K+ R +Q+ S H+EQ + + + K PPR
Sbjct: 300 NIISSPALKQNQRRENSGRIIRGILLNKDARQNQA--SGLHSEQQISNLEKD-KRPPRPS 356
Query: 1296 SADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHG 1475
L KD N +DD ++++ H S+K +RRTRNK+ PD
Sbjct: 357 HVHLVMKD---------------TNGVSDDKVIVNDLH-----SEKQERRTRNKDRPDRA 396
Query: 1476 VWAPLHHPVRSQSNDGIPSSS 1538
W QS++ + SS+
Sbjct: 397 AWTLRRSDGSYQSDESLSSSA 417
>ref|XP_003579808.1| PREDICTED: uncharacterized protein LOC100844832 [Brachypodium
distachyon]
Length = 506
Score = 315 bits (807), Expect = 4e-83
Identities = 202/468 (43%), Positives = 265/468 (56%), Gaps = 17/468 (3%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MKD RTKV +RRLPP++ Q A+VDQ+D++FAGRYDW CFR G SQK+ R+SR Y+N
Sbjct: 1 MKDPPPRTKVVLRRLPPAIGQQAVVDQVDARFAGRYDWACFRPGNASQKNHRYSRLYLNL 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
K EDVVEFAEFF+GHIFVNEKG QFK LVEYAPSQ+VPK +KKD +GTI KDLEY+E
Sbjct: 61 KSSEDVVEFAEFFNGHIFVNEKGAQFKALVEYAPSQQVPKSTIKKDARQGTITKDLEYLE 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSS 794
FLELISKP E LPSAEIQLERKEAERA A KE P+VTPLM ++R++RAAK+ QR S+
Sbjct: 121 FLELISKPTEHLPSAEIQLERKEAERAAAGKEPPVVTPLMAYIRQQRAAKNMAQR---SA 177
Query: 795 KVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQS 974
E+RR +TST VLRD +K+KPTY+L+ ++ED+
Sbjct: 178 NSRLGRKVVGVVTSTSSPKRASERRRASTSTYVLRD------AKEKPTYILVPKREDHSQ 231
Query: 975 AVGKSISVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEK-----------EXXXXXXX 1121
+ + T T V S+ D++VLLK + +
Sbjct: 232 ---REKIIAGTSGDATSSRPSGSAQVDSKKDKIVLLKGRARTDSTVSDSSTQHQPVASSR 288
Query: 1122 XXXXXXXXXXXKNHASGKIIRSIL-RKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSPS 1298
+ ASG+II++IL KEGR +++ H ++ + + K PPR P+
Sbjct: 289 NTLPSGSRQDQRLEASGRIIKTILSNKEGR---HAVASQHEQEGHIINAEKDKRPPRFPN 345
Query: 1299 ADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGV 1478
+ KD T + DD ++ HGS IS+K +R RN++ PD GV
Sbjct: 346 SRSIVKDQT---------VENAEKSHYDDKH--NHLHGSGPISEKIERHARNRDRPDRGV 394
Query: 1479 WAPLHHPVRSQSNDGIPSSSEDAQGLANSFKSFFSQ-----RASRKIE 1607
WAP + +S G +SS D + + FSQ RKIE
Sbjct: 395 WAPRRYD-KSAPGGGTQASSFDFPLMQSHSGDSFSQPQADGHGERKIE 441
>dbj|BAJ94892.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 310 bits (793), Expect = 2e-81
Identities = 191/444 (43%), Positives = 259/444 (58%), Gaps = 13/444 (2%)
Frame = +3
Query: 252 YMKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYIN 431
+MKD RTKV +RRLPP++ Q A+VDQ+D++FAGRYDW FR G SQK+ R+SR Y+N
Sbjct: 29 HMKDPAHRTKVVLRRLPPAIAQQAVVDQVDARFAGRYDWARFRPGNASQKNHRYSRLYLN 88
Query: 432 FKRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYM 611
FK PEDVVEFAEFF+GH+FVNEKG QFK LVEYAPSQ+VPK +KKD +GTI KD EY+
Sbjct: 89 FKSPEDVVEFAEFFNGHVFVNEKGAQFKALVEYAPSQQVPKSNIKKDARQGTITKDPEYL 148
Query: 612 EFLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGS 791
EFLELISKP E LPSAEIQLERKEAERA A KE P++TPLM +VR++RAAK QR S
Sbjct: 149 EFLELISKPTEHLPSAEIQLERKEAERAAAGKEPPVITPLMVYVRQQRAAKSMAQRSVNS 208
Query: 792 SKVXXXXXXXXXXXXXXXXXXXXEKRRVATST-VVLRDGMKKRASKDKPTYLLMSRKEDN 968
E+RR +TST V+RD +K+KPTY+L +++D+
Sbjct: 209 R--LSRKVAGVVTSSSSPSKRSSERRRASTSTQYVVRDN-----AKEKPTYILAPKRDDH 261
Query: 969 QSAVGKSISVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEK-----------EXXXXX 1115
+ + T + + V+ + D++VLLK + + +
Sbjct: 262 TQ---REKIIAGTSDATSGGPSGSAQVIDGKRDKIVLLKGRARVDSNISDSSTPQQSVPP 318
Query: 1116 XXXXXXXXXXXXXKNHASGKIIRSIL-RKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRS 1292
+N ASG+II++IL KEGR I++ H ++ ++ + K PPR+
Sbjct: 319 SRNTPPSTSRQDQRNEASGRIIKTILSNKEGR---HAIASQHEQEGHIISAEKDKRPPRA 375
Query: 1293 PSADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDH 1472
P++ +KD N Y D + + HGS I +K +R RN++ PD
Sbjct: 376 PNSRSTAKD--------QIVENAEKNHYDDKHNHV---HGSGPIGEKIERHARNRDRPDR 424
Query: 1473 GVWAPLHHPVRSQSNDGIPSSSED 1544
GVWAP + +S S G +SS +
Sbjct: 425 GVWAPRRYD-KSASGGGAQASSSE 447
>gb|EXB88206.1| hypothetical protein L484_011635 [Morus notabilis]
Length = 533
Score = 309 bits (792), Expect = 2e-81
Identities = 195/482 (40%), Positives = 259/482 (53%), Gaps = 18/482 (3%)
Frame = +3
Query: 255 MKDLFGRTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINF 434
MKD RTK VRRLPPS+ Q+ L QID +F+GRY WFCFR GKNSQK QR+SRAYI+F
Sbjct: 1 MKDPLSRTKAVVRRLPPSLSQSDLFQQIDDRFSGRYHWFCFRPGKNSQKHQRYSRAYIDF 60
Query: 435 KRPEDVVEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYME 614
R EDV+EFAEFFDGH+FVNEKGVQ+K +VEYAPSQRVPK +KDG +GTI KD +Y+E
Sbjct: 61 NRAEDVLEFAEFFDGHVFVNEKGVQYKTVVEYAPSQRVPKLSTRKDGRDGTIYKDPDYLE 120
Query: 615 FLELISKPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSS 794
FL+LI+KPVE LPSAEIQLERKEAE+AGA KE PIVTPLM++VR+KR+ + G Q S
Sbjct: 121 FLKLIAKPVEHLPSAEIQLERKEAEQAGAPKEAPIVTPLMEYVRQKRSIETGAQ----GS 176
Query: 795 KVXXXXXXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDN-Q 971
V KR +L++ K + KDK T+ ++ R+ED
Sbjct: 177 LVVRKISRRSGAGSTRKPGSSSAKRASEKKKYILKEKTKNTSRKDKSTFTVVPRREDQLA 236
Query: 972 SAVGKSISVLSTMEKETQEIEFDPGVVGSENDRLVLLKVKEKE----------XXXXXXX 1121
++ GK + + P + S + +LLK K E
Sbjct: 237 TSTGKETHETEIVSAIEGSVSGIPVIADSGKKKFLLLKGKRPETPVPTGMLQQQDTSFGN 296
Query: 1122 XXXXXXXXXXXKNHASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSPS 1298
+ A G++IRSI L E R Q+ H +++ K PR PS
Sbjct: 297 SPVSAAPKHNQRREAGGRLIRSILLNNESRQAQTSTPGQHQQKVQISNSENVKRLPR-PS 355
Query: 1299 ADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGV 1478
++ S H K DD + H + S+K ++RTRNK+ PD GV
Sbjct: 356 SNSRSGLNGH---VSHNDPEWDRKKDLDDKFTKKDLHNMSTASEKPEKRTRNKDRPDRGV 412
Query: 1479 WAPLHHPVRSQSNDGIPSSSED------AQGLANSFKSFFSQRASRKIEEIAIQNASIGQ 1640
WAPL S S + SSS + + S ++F + + +++ QN S G+
Sbjct: 413 WAPLRRGDVSHSGEERISSSVSQPTHSVSDTVEGSHRNFGRRGTAHNVKDEVPQNVSEGK 472
Query: 1641 SN 1646
S+
Sbjct: 473 SS 474
>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
gi|550312328|gb|ERP48419.1| hypothetical protein
POPTR_0022s00460g [Populus trichocarpa]
Length = 511
Score = 308 bits (789), Expect = 5e-81
Identities = 203/502 (40%), Positives = 279/502 (55%), Gaps = 14/502 (2%)
Frame = +3
Query: 273 RTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINFKRPEDV 452
+TKV VR LPP + Q V+QID F+GRY+W +R GK+SQK Q SRAYI+FKRP+DV
Sbjct: 8 KTKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSYRPGKSSQKHQSCSRAYIDFKRPDDV 67
Query: 453 VEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYMEFLELIS 632
++FAEFF+GH+FVNEKG QFK +VEYAPSQ VPK W KKDG EGTILKD EY+EFLE I+
Sbjct: 68 IDFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYLEFLEFIA 127
Query: 633 KPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSSKVXXXX 812
KPVE LPSAEIQLER+EAERAG K+ PIVTPLM+F+R+KRAAK G +R+ + K
Sbjct: 128 KPVENLPSAEIQLERREAERAGVAKDAPIVTPLMEFIRQKRAAKSGPRRILSNGK-PSRR 186
Query: 813 XXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSRKEDNQSAVGKSI 992
EK+R +T+ VLRD +K + K+K Y + + +D Q + K++
Sbjct: 187 AGGSGSPSSSSSKRGSEKKRASTTMYVLRDTVKGTSGKEKSIYAQVPKLDDRQ--LSKAV 244
Query: 993 SVLSTMEKETQEIEFD-PGVVGSENDRLVLLKVKEKE-----XXXXXXXXXXXXXXXXXX 1154
++ S E E E G+ G+ +++LLK KEKE
Sbjct: 245 TLGSGSGTEVSEEETAVSGITGTGKKKILLLKGKEKEISLQQSISPSDRNIISSTALKSQ 304
Query: 1155 KNHASGKIIRSI-LRKEGRMDQSYISTTHTEQLMDMAKVEY-KHPPRSPSADLNSKDLTH 1328
++ +SG++I+SI L K+ R QS S +E M + +E K PPR P A L KD
Sbjct: 305 RHESSGRVIKSILLNKDSRRIQS--SGVQSEPQMQTSNLEKDKRPPRPPHA-LVLKD--- 358
Query: 1329 YXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGVWAPLHHPVRS 1508
N DD V ++ HG ++K +RRTRNK+ PD VW
Sbjct: 359 ------------ANGTPDDKVVGNDLHGFP--NEKQERRTRNKDRPDRVVWTLRRSEGSY 404
Query: 1509 QSNDGIPSSSEDAQGLANSFKSFFSQRASRKIEEIAIQNASI-----GQSNNLAFYETSL 1673
S++ + SS+ + F S K + + +++ + G+SN+ + S
Sbjct: 405 ASDESLSSSA--YLSTQSGFDSSQVNHGDVKADTLNLRSGEVKALGSGRSNHSSLDNGSH 462
Query: 1674 GHGERKTNVSSAR-SEGMKVHG 1736
H R+ R ++G V G
Sbjct: 463 KHSGRRGPPHPVRDADGSTVEG 484
>ref|XP_004248850.1| PREDICTED: uncharacterized protein LOC101263168 [Solanum
lycopersicum]
Length = 438
Score = 306 bits (784), Expect = 2e-80
Identities = 190/450 (42%), Positives = 252/450 (56%), Gaps = 18/450 (4%)
Frame = +3
Query: 273 RTKVSVRRLPPSMVQAALVDQIDSKFAGRYDWFCFRSGKNSQKDQRHSRAYINFKRPEDV 452
RTKV +R LPP++ Q+ L++ +DS+FAGRY+WF FR K S K Q +S+AYI+F+ EDV
Sbjct: 5 RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFNFRPAKTSLKHQSYSKAYIDFRNMEDV 64
Query: 453 VEFAEFFDGHIFVNEKGVQFKVLVEYAPSQRVPKPWLKKDGCEGTILKDLEYMEFLELIS 632
EFAEFFDGH+FVNEKG QFK +VEYAPSQRVPK WLKKD EGTILKD YMEFLE ++
Sbjct: 65 TEFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLA 124
Query: 633 KPVERLPSAEIQLERKEAERAGATKEVPIVTPLMDFVRRKRAAKHGVQRLSGSSKVXXXX 812
KPVE LPSAEIQLERKEAERAG+ K+ PIVTPLMD+VR+KRA G ++ + K
Sbjct: 125 KPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVTSGARKSISNGKSSKSV 184
Query: 813 XXXXXXXXXXXXXXXXEKRRVATSTVVLRDGMKKRASKDKPTYLLMSR----KEDNQSAV 980
++R +T+ V RD K SKDK +Y+L S+ + ++S+
Sbjct: 185 GGTSSRSPSSTASRRGSEKRTSTTMYVQRDSSKVGNSKDK-SYILASKCGYQQLSDKSSA 243
Query: 981 GKSISVLSTMEKET-QEIEFDPGVVGSENDRLVLLKVKEKEXXXXXXXXXXXXXXXXXXK 1157
S + +E E + + D G +++LLK KEKE K
Sbjct: 244 SAPGSWIDVVEGEIGRSVTSDSG-----KKKILLLKGKEKESPNVSGGSLAQQNVSSALK 298
Query: 1158 NHAS-------------GKIIRSILRKEGRMDQSYISTTHTEQLMDMAKVEYKHPPRSPS 1298
N S G+IIRSIL K+ R +Q S ++Q+ D + PPR PS
Sbjct: 299 NSPSLSALKLNQHQEVGGRIIRSILLKDARQNQ---SAFQSDQIQD----KDMRPPRPPS 351
Query: 1299 ADLNSKDLTHYXXXXXXXXXXXXNKYTDDVSVIDNKHGSVSISKKHDRRTRNKEMPDHGV 1478
L KD + ++ V+ N+ V I +K +RR+RN++ PD GV
Sbjct: 352 MQLFQKDTSG----------------ANEDKVVGNEKHVVHI-EKQERRSRNRDRPDRGV 394
Query: 1479 WAPLHHPVRSQSNDGIPSSSEDAQGLANSF 1568
WAPL SQ+++G SS F
Sbjct: 395 WAPLRRADSSQASNGSLSSGNPQSSQVREF 424