BLASTX nr result
ID: Zingiber25_contig00000679
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00000679
(3761 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 899 0.0
gb|ABA93957.1| NLI interacting factor-like phosphatase family pr... 874 0.0
ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal doma... 835 0.0
gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indi... 820 0.0
gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japo... 815 0.0
ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [S... 813 0.0
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l... 795 0.0
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l... 790 0.0
gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Ze... 769 0.0
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma... 762 0.0
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu... 743 0.0
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr... 741 0.0
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr... 741 0.0
ref|XP_004980548.1| PREDICTED: RNA polymerase II C-terminal doma... 739 0.0
emb|CBI35661.3| unnamed protein product [Vitis vinifera] 738 0.0
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma... 734 0.0
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric... 726 0.0
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma... 722 0.0
gb|EMS65645.1| RNA polymerase II C-terminal domain phosphatase-l... 718 0.0
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ... 714 0.0
>ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 3-like [Oryza brachyantha]
Length = 1267
Score = 899 bits (2323), Expect = 0.0
Identities = 579/1238 (46%), Positives = 719/1238 (58%), Gaps = 94/1238 (7%)
Frame = +2
Query: 329 EEKPLDLMARERPRG---GRALDGETSDVDSSESLEEISAEDFKQEGRAG---------- 469
EE+ + LMARERPR G GE SD DSS SLEEISA+DFK+E G
Sbjct: 10 EERLVVLMARERPRSAVXGGGGGGEGSDGDSSGSLEEISADDFKKESSGGGGGAGAGAGT 69
Query: 470 --------RSRVWMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKG 625
RSRVWMGY M ++Y P+ ++FAWAQAVQNKPL P +A D +
Sbjct: 70 GGGVAAAQRSRVWMGYSMPRSYAPAFHSFAWAQAVQNKPL----VPRAAADEDEVEHVVD 125
Query: 626 KPQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEK 805
EE + +E+ ET L SD+PE +PE
Sbjct: 126 TSDEEKEEGEIEEGEAVQSSESPPRAQP----------------ETIVLDSDVPE-KPES 168
Query: 806 KESDGEEL-----QDISEFDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMF 970
DG + ++ +FD+R+ ILEEL+TI++EEAE SFE C RLR SFE+LKP+F
Sbjct: 169 AAMDGVTIPAGAEEEDMDFDQRVGSILEELETISIEEAEKSFEGACTRLRTSFENLKPLF 228
Query: 971 TGIESSDTXXXXXXQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTL 1150
S QQA +AI T + NS M K++Q K +LL+LL HIKN+YS + T
Sbjct: 229 PETGSPMPMLDTLVQQAFIAIDTITTVANSYDMPKREQTKNMLLKLLFHIKNRYSYMLTP 288
Query: 1151 EQVKEIDTLVNSLVFEDNKKEKADLTNGPVVSLHGSNVLEKACLVPEALD--LP------ 1306
+Q E+D+ V LVFED K D N P + G+N A + L LP
Sbjct: 289 DQRNELDSRVRQLVFEDGK----DTANCPNATC-GTNTSNVAATSGQVLSERLPFESGAG 343
Query: 1307 ---------KLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMV 1459
K+ +P SKNR+ SPLLDLHADY+E+SLPSPTR++ P F +PKPIG G
Sbjct: 344 NTFSGTSMLKVEIP--SKNRM-ISPLLDLHADYDENSLPSPTRDSTPPFPVPKPIGFGTF 400
Query: 1460 LPVSSQP-ITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQ 1636
L +P I + +P + DALKAVSSYQ K+G S ++D LPSPTPS DG +
Sbjct: 401 LMAPDRPSIMERVEPVKNSSYPSLNDALKAVSSYQQKYGQKSTFASDDLPSPTPSGDGDK 460
Query: 1637 -GXXXXXXXXXXXXXCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHP--VEQL-NPMS 1804
G + QM SR S ++S P +Q+ NP+S
Sbjct: 461 SGDKGGDIFGEVSSFPASNKIVLPVVNQMPPSRPSTVSSSSDSFAGGPPGYAKQIENPVS 520
Query: 1805 --KPALKPALKRRDPRLKFVNNEVKSISDEGR---VTEPDLLKSDP--VGVATNSKKHKT 1963
LK K RDPRL+F+N + ++D R EP+ K VGV NS+KHKT
Sbjct: 521 GSNHMLKATAKSRDPRLRFLNRDAGVVADANRRLNFAEPNPSKDRTMGVGVPINSRKHKT 580
Query: 1964 -DESVARDHMMKKQRHKLTTSREMETASG-SGWS-EAKNVIPQPSFKIQVNENFQVDVRK 2134
DE + ++M+K+ R R++ T +G GW+ + NV S Q N+N ++
Sbjct: 581 VDEPLVDENMLKRSRGGNGNPRDVLTPAGRGGWAKDGVNVSSYSSDGFQPNQNTRLGNST 640
Query: 2135 SGTAAAVPDKKPIFD-NNFDELSGLR----------SIPKSNPTPTISLPSLLK--AVNP 2275
+G+ D + + NN SG+ S P+++ P++SLP++LK AVNP
Sbjct: 641 TGSHNVRTDSTLVSNTNNMTNSSGINTGVVQAPQTNSSPQTSSAPSVSLPAMLKDIAVNP 700
Query: 2276 TILLQLHQMEQQRIAA-ENQKKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGLNQ 2452
T+L+Q QMEQQ+++A E +K S ++N + LP + AS K+ E+
Sbjct: 701 TMLMQWIQMEQQKMSATEPLQKVTASVGMTSNETAGMVLPLSCAS------KTTEAAPVP 754
Query: 2453 PGISLIPSQMASSSTQPDVARIRMKPRDPRRILHDNMVQKNDGVV---YQQSKIDAAA-S 2620
S +P Q A+ +Q D IRMKPRDPRRILH N+ QKND V +Q+KI+ A
Sbjct: 755 SVRSQVPMQTAAVHSQNDAGVIRMKPRDPRRILHSNIAQKNDTVPPVGVEQAKINGTALP 814
Query: 2621 DPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXXCNNQPVAS--------------Q 2758
D Q S L Q + L N PV++ Q
Sbjct: 815 DSQGSKDHLLNHEQQAEQLQTSALPSQPVTPSARQVTMNANPVSNSQLAATALMPHGSTQ 874
Query: 2759 ADQVIVEAASGELN--DSETTSLLVSEVG--SEKGTRQSANPWGDVDHLFDGYNDEQKAT 2926
V A L +ET V+ G + A+PWGDVDHL DGY+D+QKA
Sbjct: 875 QTSSSVNKADPRLTAGQNETNDDAVTSTGPLTAPDAVLPASPWGDVDHLLDGYDDQQKAL 934
Query: 2927 IQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQDKEMSQ 3106
IQKER+RRI EQ KMFAA+K NSAKF EV+ HE+ILR+KEEQD+E +
Sbjct: 935 IQKERARRIMEQQKMFAAQKLCLVLDLDHTLLNSAKFAEVEPIHEEILRKKEEQDRERAD 994
Query: 3107 RHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGR 3286
RHLF F HMGMWTKLRPGIWNFLEKAS LYELHLYTMGNK+YATEMA+VLDPTGTLFAGR
Sbjct: 995 RHLFCFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKIYATEMARVLDPTGTLFAGR 1054
Query: 3287 VISKGDDADTFDGDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP 3466
VIS+GDD DT D DERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK NLIVVERYTYFP
Sbjct: 1055 VISRGDDGDTLDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVERYTYFP 1114
Query: 3467 SSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILAAEQ 3646
SRRQFGL GPSLLEID DERPEDGTLASSLAVIER+HQNFF+H +L D DVR+ILA+EQ
Sbjct: 1115 CSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHQNFFTHPNLNDADVRSILASEQ 1174
Query: 3647 RKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 3760
++IL GCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC
Sbjct: 1175 QRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 1212
>gb|ABA93957.1| NLI interacting factor-like phosphatase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1272
Score = 874 bits (2257), Expect = 0.0
Identities = 558/1243 (44%), Positives = 705/1243 (56%), Gaps = 99/1243 (7%)
Frame = +2
Query: 329 EEKPLDLMARERPR----------------GGRALDGETSDVDSSESLEEISAEDFKQEG 460
EE+ + LMARERPR GG GE SD DSS SLEEISA+DFK+E
Sbjct: 10 EERLVVLMARERPRSAVVAPGGDLVTAGGGGGGGGGGEGSDGDSSGSLEEISADDFKKES 69
Query: 461 RAG-----------RSRVWMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTD 607
A RSRVWMGY + ++Y P+ ++FAWAQAVQNKPL + D +
Sbjct: 70 SAAGGAAAAAAAQQRSRVWMGYNIPRSYAPAFHSFAWAQAVQNKPLVPRAADAADEDEVE 129
Query: 608 NVDAKGKPQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIP 787
+V ++E ++ ++ Q ET L SD P
Sbjct: 130 HVVDTSDEEKEEGEIEEGEAVQTTTTSSSSPPCAQPP-------------ETIDLDSDAP 176
Query: 788 ENEPEK-------KESDGEELQDISEFDKRISLILEELDTITVEEAETSFEAVCLRLRKS 946
E G E +++ +FD+R+ ILEEL+ +++EEAE SFE C RLR
Sbjct: 177 EKSESMVAMYGGGAAPAGAEEEEV-DFDQRVGSILEELEMVSIEEAEKSFEGACTRLRTC 235
Query: 947 FEDLKPMFTGIESSDTXXXXXXQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKN 1126
FE+LKP+F S QQA + I T + NS M K++Q K +LL+LL HIKN
Sbjct: 236 FENLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYDMPKREQTKNMLLKLLFHIKN 295
Query: 1127 QYSVLFTLEQVKEIDTLVNSLVFEDNKKEKADLTNGP------VVSLHGSNVLEKACLVP 1288
+YS + T +Q E+D+ V LVFED K D NGP + G + E+
Sbjct: 296 RYSDMLTPDQRDELDSRVRQLVFEDGK----DNANGPNATSTNAAAPSGQVLSERLPFES 351
Query: 1289 EALD-LPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLP 1465
A + K+ +P +KNR+ SPLLDLHADY+E+SLPSPTR++ P F +PKPIG G +
Sbjct: 352 GAGNSFSKVEIP--AKNRM-VSPLLDLHADYDENSLPSPTRDSKPPFDVPKPIGYGALPM 408
Query: 1466 VSSQPIT------AKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSED 1627
+P AKN + DALKAV YQ K G S ++D LPSPTPS D
Sbjct: 409 APDRPSVLERVEPAKNSS-----YQSFNDALKAVCYYQQKHGQKSNFASDDLPSPTPSGD 463
Query: 1628 GGQGXXXXXXXXXXXXXCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHP-----VEQL 1792
G + + A + SR S +NS P +E
Sbjct: 464 GDKSGDKGGDVFGEVSSFSASNKIALPIVNQMPSRPSTVSSNSDSFAGGPPGYAKQIENS 523
Query: 1793 NPMSKPALKPALKRRDPRLKFVNNEVKSISDEGR---VTEPDLLKSDPVG--VATNSKKH 1957
S LK K RDPRLKF+N + ++D R EP+ K +G V+ NS+K+
Sbjct: 524 VSGSNHLLKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGGVSINSRKN 583
Query: 1958 KT-DESVARDHMMKKQRHKLTTSREMETASGSGWS-EAKNVIPQPSFKIQVNENFQVDVR 2131
K DE + ++ +K+ R + R+M+ GW+ + N+ S Q N+N ++
Sbjct: 584 KAVDEPMVDENALKRSRGVIGNLRDMQPTGRGGWAKDGGNISSYSSDGFQPNQNTRLGNN 643
Query: 2132 KSG-----TAAAVPDKKPIFDNNFDELSGL------RSIPKSNPTPTISLPSLLK--AVN 2272
+G T + + NN G+ S P+++ P +SLP++LK AVN
Sbjct: 644 TTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSAPAVSLPAMLKDIAVN 703
Query: 2273 PTILLQLHQMEQQRIAA-ENQKKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGLN 2449
PT+L+Q QMEQQ+++A E Q+K S ++NV PG V + + P ++ + +
Sbjct: 704 PTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVT-----PGMVLPLGNAPKTTEVAAV- 757
Query: 2450 QPGIS-LIPSQMASSSTQPDVARIRMKPRDPRRILHDNMVQKNDGV----VYQQSKIDAA 2614
P + +P Q A +Q D IRMKPRDPRRILH N+VQKND V V Q A
Sbjct: 758 -PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDTVPPVGVEQAKSNGTA 816
Query: 2615 ASDPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXXCNNQPVASQADQVIVEAASGE 2794
D QSS L Q + L + N PV++ Q+ A
Sbjct: 817 PPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVTMNANPVSNS--QLAATALMPP 874
Query: 2795 LNDSETTSLLVSEVGSEKGTRQS---------------------ANPWGDVDHLFDGYND 2911
+++ TS V++ Q+ A+P+GDVDHL DGY+D
Sbjct: 875 HGNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPASPYGDVDHLLDGYDD 934
Query: 2912 EQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQD 3091
+QKA IQKER+RRI EQ+KMFAARK NSAKFIEVD H +ILR+KEEQD
Sbjct: 935 QQKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEVDHIHGEILRKKEEQD 994
Query: 3092 KEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGT 3271
+E ++RHLF F HMGMWTKLRPGIWNFLEKAS LYELHLYTMGNK+YATEMAKVLDPTGT
Sbjct: 995 RERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKVYATEMAKVLDPTGT 1054
Query: 3272 LFAGRVISKGDDADTFDGDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVER 3451
LFAGRVIS+GDD D FD DERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK NLIVVER
Sbjct: 1055 LFAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKHNLIVVER 1114
Query: 3452 YTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNI 3631
YTYFP SRRQFGL GPSLLEID DERPEDGTLASSLAVIER+H+NFFSH +L D DVR+I
Sbjct: 1115 YTYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHKNFFSHPNLNDADVRSI 1174
Query: 3632 LAAEQRKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 3760
LA+EQ++IL GCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC
Sbjct: 1175 LASEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 1217
>ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Brachypodium distachyon]
Length = 1259
Score = 835 bits (2157), Expect = 0.0
Identities = 531/1237 (42%), Positives = 698/1237 (56%), Gaps = 93/1237 (7%)
Frame = +2
Query: 329 EEKPLDLMARERPR------GGRALD----GETSDVDSSESLEEISAEDFKQEGRAG--- 469
EE+ + LM RERPR GG + GETSD DSSESLEEI+A DF++E G
Sbjct: 10 EERLVVLMTRERPRSAVLAPGGDLVSANGGGETSDEDSSESLEEITAADFQKESSGGAAA 69
Query: 470 ---------RSRVWMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAK 622
RSRVWMGY MS++Y P+ ++FAWAQAVQNKP L P A D +
Sbjct: 70 GTAASAAAQRSRVWMGYTMSRSYAPAFHSFAWAQAVQNKP----LVPPPAADEDEVEHIV 125
Query: 623 GKPQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEP- 799
EE + +E+ ET L SD+PE
Sbjct: 126 DTSDEEKEEGEIEEGE----------------AVDTSFPSPHAQPETIDLDSDVPEKSES 169
Query: 800 ---EKKESDGEELQDISEFDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMF 970
E + +++ +FD+R+ ILEEL+ +++EEAE SFE C RLR FE+LKP+F
Sbjct: 170 MAVEGSNTAAVAVEEEVDFDQRVGSILEELEMVSIEEAEKSFEGACERLRTCFENLKPLF 229
Query: 971 TGIESSDTXXXXXXQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTL 1150
S QQ + I T + NS M K+ QNK++LL+LL H++N+YS + T
Sbjct: 230 LESGSPMPMLDALVQQGFVGIDTITTVANSYAMPKRVQNKEMLLKLLFHLRNRYSDMLTP 289
Query: 1151 EQVKEIDTLVNSLVFEDNKKEKADLTNGP--VVSLHGSNVLEKACLVP------------ 1288
+Q E+D+ V L F D ++ T+GP S + +NV+ VP
Sbjct: 290 DQRVELDSRVRQLAFVDGEEN----TDGPNASCSTNSTNVVVPTGQVPSERLPFESGATN 345
Query: 1289 --EALDLPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVL 1462
LP L T++KNR+ SPLLDLHAD++E+SLPSPTR+N P+FS+PKPIG G
Sbjct: 346 PFSGSSLP--WLETQTKNRM-VSPLLDLHADHDENSLPSPTRDNAPQFSVPKPIGFGAFP 402
Query: 1463 PVSSQPITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQG- 1639
+ +T + L+P V D+L VSSY+ K+ S + D LPSPTPS DG +
Sbjct: 403 MGPDRSLTERAEPSKKNLYPSVNDSLD-VSSYKQKYSQKSNFANDDLPSPTPSGDGDKSE 461
Query: 1640 --XXXXXXXXXXXXXCNPRAVHAATQFQMVKSRSSAPCTNSSIS---NQSHPVEQLNPMS 1804
N A+ + +Q + S+ +N S S + +EQ
Sbjct: 462 DKDGDMFGEISSFSSSNKTALPSVSQIPASRP-STVSSSNGSFSGPPGYAKKIEQSVSGP 520
Query: 1805 KPALKPALKRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVATNSKKHK-TDESVAR 1981
ALKP+ K RDPRL+++N + + EP+ +G KHK + +
Sbjct: 521 NLALKPSAKSRDPRLRYLNRDPGDANRCMNFAEPNASLGGTLG------KHKAVGQPLMD 574
Query: 1982 DHMMKKQRHKLTTSREMETASGSGWSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPD 2161
++M+K+ R + R+++ G + N+ PS ++Q N+N ++D + +G D
Sbjct: 575 ENMVKRARGSIGNPRDLQVPPG---RDGSNISFYPSDRVQSNQNTRLDTKTTGNPNLRAD 631
Query: 2162 KK------PIFDNNFDELSGLR-----SIPKSNPTPTISLPSLLK--AVNPTILLQLHQM 2302
+ I +++ L S+P+++ P++SLP++LK AVNPT+L+ QM
Sbjct: 632 SQLLSNVSSITNSSVTSTKTLNAGQPDSVPQTSAAPSVSLPAVLKDIAVNPTVLMHWIQM 691
Query: 2303 EQQRIAAENQKKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGLNQPGISLIPSQM 2482
EQQ+ +A ++ + ++ + N+ G V S LK+ ++ P+Q
Sbjct: 692 EQQKRSASEPQQTVNTLGGISSGMINNDTAGMVIPPGSA-LKTADAAQIPSIRPQCPTQT 750
Query: 2483 ASSSTQPDVARIRMKPRDPRRILHDNMVQKND----------GVVY---QQSKIDAAASD 2623
A +Q D IRMKPRDPRRILH+N KND G+V Q SK + +
Sbjct: 751 APVISQTDAGVIRMKPRDPRRILHNNTSPKNDTTNSEQARSNGIVLPVSQDSKDNMINRE 810
Query: 2624 PQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXXCNNQPVASQADQVIVEAASGEL-- 2797
Q+ ++ A +L+N+ N+Q AS + + SG +
Sbjct: 811 QQAEQLQTGALPSQPVSLSNI-ARPSTMSASMVDPVSNSQLAASSL--MAPQQTSGSINR 867
Query: 2798 ---------NDSETTSLLVSEVGSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRR 2950
ND + + + G AN WGD+D L GY+D+QKA IQKER+RR
Sbjct: 868 ADPRLAPGQNDPNADAATNASPATTLGAAPPANQWGDLDDLLSGYDDQQKALIQKERARR 927
Query: 2951 IAEQNKMFAARKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQH 3130
I EQ KMF+ARK NSAKF+EVD HE+ILR+KEEQD+E +RHLFR H
Sbjct: 928 IMEQQKMFSARKLCLVLDLDHTLLNSAKFLEVDPIHEEILRKKEEQDRERPERHLFRLHH 987
Query: 3131 MGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVI------ 3292
M MWTKLRPGIWNFLEKAS LYELHLYTMGNKLYATEMAKVLDPTG LF GRVI
Sbjct: 988 MSMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGALFEGRVISRGGDG 1047
Query: 3293 -SKGDDADTFDGDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPS 3469
S+G D D+FD D+RVPKSKDLDGVLGMESAVVIIDDSVRVWPHNK N+IVVERYTYFP
Sbjct: 1048 TSRGGDGDSFDSDDRVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKNNMIVVERYTYFPC 1107
Query: 3470 SRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILAAEQR 3649
SRRQFGL GPSLLEID DERPEDGTLASSLAVI R+HQNFFSH +L D DVR+ILA+EQR
Sbjct: 1108 SRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIGRIHQNFFSHPNLNDADVRSILASEQR 1167
Query: 3650 KILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 3760
+ILAGCRIVFSRIFPVGEANPH+HPLWQ+AEQFGAVC
Sbjct: 1168 RILAGCRIVFSRIFPVGEANPHLHPLWQSAEQFGAVC 1204
>gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indica Group]
Length = 1255
Score = 820 bits (2119), Expect = 0.0
Identities = 541/1264 (42%), Positives = 676/1264 (53%), Gaps = 120/1264 (9%)
Frame = +2
Query: 329 EEKPLDLMARERPR----------------GGRALDGETSDVDSSESLEEISAEDFKQEG 460
EE+ + LMARERPR GG GE SD DSS SLEEISA+DFK+E
Sbjct: 10 EERLVVLMARERPRSAVVAPGGDLVTAGGGGGGGGGGEGSDGDSSGSLEEISADDFKKES 69
Query: 461 RAG--------------RSRVWMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGD 598
A RSRVWMGY + ++Y P+ ++FAWAQAVQNKPL + D
Sbjct: 70 SAAGGVAAAAAAAAAQQRSRVWMGYNIPRSYAPAFHSFAWAQAVQNKPLVPRAADAADED 129
Query: 599 LTDNVDAKGKPQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSS 778
++V ++E ++ ++ Q ET L S
Sbjct: 130 EVEHVVDTSDEEKEEGEIEEGEAVQTTTTSSSSPPCAQPP-------------ETIDLDS 176
Query: 779 DIPENEPEKKESDG-------EELQDISEFDKRISLILEELDTITVEEAET--------- 910
D PE DG E +++ +FD+R+ ILEEL+ +++EEAE
Sbjct: 177 DAPEKSESMVAMDGGGAAPAGAEEEEV-DFDQRVGSILEELEMVSIEEAEKYGLMILLYG 235
Query: 911 ------------------------SFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQ 1018
SFE C RLR FE+LKP+F S QQ
Sbjct: 236 KVHVLDVFWCMIQLLRDPILIFCRSFEGACTRLRTCFENLKPLFPESGSPMPMLDALVQQ 295
Query: 1019 AVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVFE 1198
A + I T + NS M K++Q K +LL+LL HIKN+YS + T +Q E+D+ V LVFE
Sbjct: 296 AFVGIDTITTVANSYDMPKREQTKNMLLKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFE 355
Query: 1199 DNKKEKADLTNGP------VVSLHGSNVLEKACLVPEALD-LPKLVLPTRSKNRVDFSPL 1357
D K D NGP + G + E+ A + K+ +P +KNR+ SPL
Sbjct: 356 DGK----DNANGPNATSTNAAAPSGQVLSERLPFESGAGNSFSKVEIP--AKNRM-VSPL 408
Query: 1358 LDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPIT------AKNGGEDVMLH 1519
LDLHADY+E+SLPSPTR++ P F +PKPIG G + +P AKN +
Sbjct: 409 LDLHADYDENSLPSPTRDSAPPFDVPKPIGYGALPMAPDRPSVLERVEPAKNSS-----Y 463
Query: 1520 PYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXXCNPRAVH 1699
DALKAV YQ K G S ++D LPSPTPS DG + +
Sbjct: 464 QSFNDALKAVCYYQQKHGQKSNFASDDLPSPTPSGDGDKSGDKGGDVFGEVSSFSASNKI 523
Query: 1700 AATQFQMVKSRSSAPCTNSSISNQSHP-----VEQLNPMSKPALKPALKRRDPRLKFVNN 1864
+ SR S +NS P +E S LK K RDPRLKF+N
Sbjct: 524 VLPIVNQMPSRPSTVSSNSDSFAGGPPGYAKQIENSVSGSNHLLKATAKSRDPRLKFLNR 583
Query: 1865 EVKSISDEGR---VTEPDLLKSDPVGVATNSKKHKTDESVARDHMMKKQRHKLTTSREME 2035
+ ++D R EP+ LK P V S +
Sbjct: 584 DTGGVADANRRVNFAEPNPLKIGPWVVEYQS-----------------------IAPNQN 620
Query: 2036 TASGSGWSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLRSI 2215
T G+ + N+ + +N SGT+ + + S
Sbjct: 621 TRLGNNTTGNHNIRTDSTLASNLNNT----TNNSGTSPGIV-----------QAPQTNSA 665
Query: 2216 PKSNPTPTISLPSLLK--AVNPTILLQLHQMEQQRIAA-ENQKKNAVSTSDSANVLSVNE 2386
P+++ P +SLP++LK AVNPT+L+Q +ME +++A E Q+K S ++NV
Sbjct: 666 PQTSSAPAVSLPAMLKDIAVNPTMLMQWIRMEHHKMSASEPQQKVTASVGMTSNVT---- 721
Query: 2387 LPGTVASINSTPLKSKESGLNQPGIS-LIPSQMASSSTQPDVARIRMKPRDPRRILHDNM 2563
PG V + + P ++ + + P + +P Q A +Q D IRMKPRDPRRILH N+
Sbjct: 722 -PGMVLPLGNAPKTTEVAAV--PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNI 778
Query: 2564 VQKNDGV----VYQQSKIDAAASDPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXX 2731
VQKND V V Q A D QSS L Q + L +
Sbjct: 779 VQKNDTVPPVGVEQAKSNGTAPPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVT 838
Query: 2732 CNNQPVASQADQVIVEAASGELNDSETTSLLVSEVGSEKGTRQS---------------- 2863
N PV++ Q+ A +++ TS V++ Q+
Sbjct: 839 MNANPVSNS--QLAATALMPPHGNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAP 896
Query: 2864 -----ANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNS 3028
A+P+GDVDHL DGY+D+QKA IQKER+RRI EQ+KMFAARK NS
Sbjct: 897 DAVPPASPYGDVDHLLDGYDDQQKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNS 956
Query: 3029 AKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHL 3208
AKFIEVD H +ILR+KEEQD+E ++RHLF F HMGMWTKLRPGIWNFLEKAS LYELHL
Sbjct: 957 AKFIEVDHIHGEILRKKEEQDRERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHL 1016
Query: 3209 YTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERVPKSKDLDGVLGMESAVV 3388
YTMGNK+YATEMAKVLDPTGTLFAGRVIS+GDD D FD DERVPKSKDLDGVLGMESAVV
Sbjct: 1017 YTMGNKVYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVV 1076
Query: 3389 IIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVI 3568
IIDDSVRVWPHNK NLIVVERYTYFP SRRQFGL GPSLLEID DERPEDGTLASSL VI
Sbjct: 1077 IIDDSVRVWPHNKHNLIVVERYTYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLTVI 1136
Query: 3569 ERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQF 3748
ER+H+NFFSH +L D DVR+ILA+EQ++IL GCRIVFSRIFPVGEANPHMHPLWQTAEQF
Sbjct: 1137 ERIHKNFFSHPNLNDADVRSILASEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQF 1196
Query: 3749 GAVC 3760
GAVC
Sbjct: 1197 GAVC 1200
>gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japonica Group]
Length = 1267
Score = 815 bits (2106), Expect = 0.0
Identities = 542/1258 (43%), Positives = 680/1258 (54%), Gaps = 121/1258 (9%)
Frame = +2
Query: 350 MARERPR----------------GGRALDGETSDVDSSESLEEISAEDFKQEGRAGRSRV 481
MARERPR GG GE SD DSS SLEEISA+DFK+E A S
Sbjct: 1 MARERPRSAVVAPGGDLVTAGGGGGGGGGGEGSDGDSSGSLEEISADDFKKESSAAGSAA 60
Query: 482 WMGYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVE 661
++ +AVQNKP+ SA D D ++E V+
Sbjct: 61 AAAAAQQRS-----------RAVQNKPV-----VPSAADAAD--------EDEVEHVVDT 96
Query: 662 DSSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEK-------KESDG 820
+ ET L SD PE G
Sbjct: 97 SDEEKEEGEIEEGEAVQTTTTSSSSPPCAQPPETIDLDSDAPEKSESMVAMYGGGAAPAG 156
Query: 821 EELQDISEFDKRISLILEELDTITVEEAET------------------------------ 910
E +++ +FD+R+ ILEEL+ +++EEAE
Sbjct: 157 AEEEEV-DFDQRVGSILEELEMVSIEEAEKYGLMILLYGKVHVLDVFWCMIQLLRDPILM 215
Query: 911 ---SFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQAVMAIQTTYSALNSVTMQKKD 1081
SFE C RLR FE+LKP+F S QQA + I T + NS M K++
Sbjct: 216 FCRSFEGACTRLRTCFENLKPLFPESGSPMPMLDALVQQAFVGIDTITTVANSYDMPKRE 275
Query: 1082 QNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVFEDNKKEKADLTNGP------VV 1243
Q K +LL+LL HIKN+YS + T +Q E+D+ V LVFED K D NGP
Sbjct: 276 QTKNMLLKLLFHIKNRYSDMLTPDQRDELDSRVRQLVFEDGK----DNANGPNATSTNAA 331
Query: 1244 SLHGSNVLEKACLVPEALD-LPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLP 1420
+ G + E+ A + K+ +P +KNR+ SPLLDLHADY+E+SLPSPTR++ P
Sbjct: 332 APSGQVLSERLPFESGAGNSFSKVEIP--AKNRM-VSPLLDLHADYDENSLPSPTRDSKP 388
Query: 1421 KFSIPKPIGLGMVLPVSSQPIT------AKNGGEDVMLHPYVTDALKAVSSYQLKFGSNS 1582
F +PKPIG G + +P AKN + DALKAV YQ K G S
Sbjct: 389 PFDVPKPIGYGALPMAPDRPSVLERVEPAKNSS-----YQSFNDALKAVCYYQQKHGQKS 443
Query: 1583 ILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXXCNPRAVHAATQFQMVKSRSSAPCTNSSI 1762
++D LPSPTPS DG + + A + SR S +NS
Sbjct: 444 NFASDDLPSPTPSGDGDKSGDKGGDVFGEVSSFSASNKIALPIVNQMPSRPSTVSSNSDS 503
Query: 1763 SNQSHP-----VEQLNPMSKPALKPALKRRDPRLKFVNNEVKSISDEGR---VTEPDLLK 1918
P +E S LK K RDPRLKF+N + ++D R EP+ K
Sbjct: 504 FAGGPPGYAKQIENSVSGSNHLLKATAKSRDPRLKFLNRDTGGVADANRRVNFAEPNPSK 563
Query: 1919 SDPVG--VATNSKKHKT-DESVARDHMMKKQRHKLTTSREMETASGSGWS-EAKNVIPQP 2086
+G V+ NS+K+K DE + ++ +K+ R + R+M+ GW+ + N+
Sbjct: 564 DRTMGGGVSINSRKNKAVDEPMVDENALKRSRGVIGNLRDMQPTGRGGWAKDGGNISSYS 623
Query: 2087 SFKIQVNENFQVDVRKSG-----TAAAVPDKKPIFDNNFDELSGL------RSIPKSNPT 2233
S Q N+N ++ +G T + + NN G+ S P+++
Sbjct: 624 SDGFQPNQNTRLGNNTTGNHNIRTDSTLASNLNNTTNNSGTSPGIVQAPQTNSAPQTSSA 683
Query: 2234 PTISLPSLLK--AVNPTILLQLHQMEQQRIAA-ENQKKNAVSTSDSANVLSVNELPGTVA 2404
P +SLP++LK AVNPT+L+Q QMEQQ+++A E Q+K S ++NV PG V
Sbjct: 684 PAVSLPAMLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVT-----PGMVL 738
Query: 2405 SINSTPLKSKESGLNQPGIS-LIPSQMASSSTQPDVARIRMKPRDPRRILHDNMVQKNDG 2581
+ + P ++ + + P + +P Q A +Q D IRMKPRDPRRILH N+VQKND
Sbjct: 739 PLGNAPKTTEVAAV--PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILHSNIVQKNDT 796
Query: 2582 V----VYQQSKIDAAASDPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXXCNNQPV 2749
V V Q A D QSS L Q + L + N PV
Sbjct: 797 VPPVGVEQAKSNGTAPPDSQSSKDHLLNQDQKAEQLQAIALPSLPVTSSARPVTMNANPV 856
Query: 2750 ASQADQVIVEAASGELNDSETTSLLVSEVGSEKGTRQS---------------------A 2866
++ Q+ A +++ TS V++ Q+ A
Sbjct: 857 SNS--QLAATALMPPHGNTKQTSSSVNKADPRLAAGQNESNDDAATSTGPVTAPDAVPPA 914
Query: 2867 NPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNSAKFIEV 3046
+P+GDVDHL DGY+D+QKA IQKER+RRI EQ+KMFAARK NSAKFIEV
Sbjct: 915 SPYGDVDHLLDGYDDQQKALIQKERARRIKEQHKMFAARKLCLVLDLDHTLLNSAKFIEV 974
Query: 3047 DLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNK 3226
D H +ILR+KEEQD+E ++RHLF F HMGMWTKLRPGIWNFLEKAS LYELHLYTMGNK
Sbjct: 975 DHIHGEILRKKEEQDRERAERHLFCFNHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 1034
Query: 3227 LYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERVPKSKDLDGVLGMESAVVIIDDSV 3406
+YATEMAKVLDPTGTLFAGRVIS+GDD D FD DERVPKSKDLDGVLGMESAVVIIDDSV
Sbjct: 1035 VYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSV 1094
Query: 3407 RVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERLHQN 3586
RVWPHNK NLIVVERYTYFP SRRQFGL GPSLLEID DERPEDGTLASSLAVIER+H+N
Sbjct: 1095 RVWPHNKHNLIVVERYTYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHKN 1154
Query: 3587 FFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 3760
FFSH +L D DVR+ILA+EQ++IL GCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC
Sbjct: 1155 FFSHPNLNDADVRSILASEQQRILGGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 1212
>ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [Sorghum bicolor]
gi|241935397|gb|EES08542.1| hypothetical protein
SORBIDRAFT_05g019010 [Sorghum bicolor]
Length = 1197
Score = 813 bits (2101), Expect = 0.0
Identities = 520/1211 (42%), Positives = 699/1211 (57%), Gaps = 74/1211 (6%)
Frame = +2
Query: 350 MARERPR------GGRALD----GETSDVDSSESLEEISAEDFKQEGRAG---------- 469
MARERPR GG + GE SD DS+ S+EEISA+DF+++ +
Sbjct: 1 MARERPRSTVVAAGGDLVTAPGGGEGSDGDSAGSIEEISADDFRKDSSSALGGPAAAAAA 60
Query: 470 --RSRVWMGYP----MSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDN-VDAKGK 628
RSR W+G P M++N+G + +FAW+QAV+NKPLGL P S D ++ VDA
Sbjct: 61 GQRSRSWVGPPAVGYMARNFGHAFNSFAWSQAVRNKPLGLQPPPASDEDEVEHAVDASDG 120
Query: 629 PQEEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKK 808
+EE + + ++++ L+ +P + E++
Sbjct: 121 EKEEG------EIEEGEAVEAEASPARAQPETIDLDADADALEKSESLAGAVPASAAEEE 174
Query: 809 ESDGEELQDISEFDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESS 988
E + D+R+ ILEEL+ +++EEAE SFE C RL FE+LKP+F +E+
Sbjct: 175 EVN---------LDQRVGSILEELEMVSIEEAEKSFEGACGRLHTCFENLKPLFQELENG 225
Query: 989 D--TXXXXXXQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVK 1162
QQA + I T + S + + +QNK LL+ L HIKN+YS + T EQ
Sbjct: 226 SPMAILEPLMQQAFIGIDTLTTVAISYNLPRSEQNKTTLLKSLFHIKNRYSDMLTPEQRD 285
Query: 1163 EIDTLVNSLVF--EDNKKEKAD---------LTNGPVVSLHGSNVLEKACLVPEALDLPK 1309
E+D+ V LVF +DN + + L VS G E P + LP+
Sbjct: 286 ELDSRVRKLVFGEKDNVSDPSTSSGTNAINVLAPSGQVSSSGGLPFESGAANPFS-SLPR 344
Query: 1310 LVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITA 1489
L +P + SPLLDLHADY+E+SLPSPTR+N P F +PKPIG G P+ + ++
Sbjct: 345 LEVPAKR-----ISPLLDLHADYDENSLPSPTRDNAPPFPVPKPIGFG-AFPMVPEKLSF 398
Query: 1490 KNGGEDVM--LHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXX 1663
E L+P + D LKAVSSYQ K+G S+ +D LPSPTPS D G+
Sbjct: 399 PERVEPAKNSLYPSLNDPLKAVSSYQQKYGQKSVFPSDDLPSPTPSGDEGKSADKGGDIF 458
Query: 1664 XXXXXCN-PRAVHAATQFQMVKSRSSAPCTNSSISNQSHP------VEQLNPMSKP--AL 1816
P+++ + QM S+ S ++S IS S P +EQ P++ P A+
Sbjct: 459 SEVSSFPVPKSIALPSTSQMPASQPST-VSSSGISYASGPPGFAKQIEQ--PVAGPNHAI 515
Query: 1817 KPALKRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVAT-NSKKHKT-DESVARDHM 1990
K A K RDPRL+F+N + +D R LK +G A+ ++KHK D+ +++
Sbjct: 516 KAASKSRDPRLRFLNRDSAGATDVNRRANFSELKDGNLGGASVGNRKHKAIDDPQVDENV 575
Query: 1991 MKKQRHKLTTSREMETASGSGWSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPDKKP 2170
+K+ R R+++ N N +++R ++ +
Sbjct: 576 LKRFRGGTANPRDLQPTG--------------------NPNQLMNIRAPTNSSGI----- 610
Query: 2171 IFDNNFDELSGLRSI-PKSNPTPTISLPSLLK---AVNPTILLQLHQMEQQRIAAENQKK 2338
N L ++ P + P + +PS+L AVNPT+L+ L QME +QKK
Sbjct: 611 ----NMKTLQPPQTTAPHVSAAPAVPVPSMLLKDIAVNPTLLMHLIQME-------HQKK 659
Query: 2339 NAVSTSDS-ANVLSVNELPGTVASINSTPLKSKESGLNQPGISLIPSQMASSSTQPDVAR 2515
+A T ++ +S N + G V + + P K+ E+ +P+Q S ++Q D
Sbjct: 660 SASETQGGMSSGMSNNGIAGMVFTPGNAP-KTTEAAQVPSVRPQVPAQTPSLNSQNDGGI 718
Query: 2516 IRMKPRDPRRILHDNMVQKNDGVVYQQSKI------DAAASDPQSSLV--------RLAA 2653
+RMKPRDPRRILH+N+ QK+D +V +Q K D+ + Q+S + +A
Sbjct: 719 LRMKPRDPRRILHNNVAQKSDAMVLEQVKTNGITQPDSQGTKDQTSSMPSQPTLPSSVAR 778
Query: 2654 PLQLTKNLANVLXXXXXXXXXXXXXXCNNQPVAS--QADQVIVEAASGELNDSETTSLLV 2827
P TK++ V Q + S + D + +G+ D+ TT
Sbjct: 779 PFTNTKHVDPVSNSQLAATAIMAP---TQQALGSINKVDPRLAVEQNGQNADATTTDASA 835
Query: 2828 SEVGSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXX 3007
+E+ + Q +PWG++DHL DGY+D+QKA IQKER+RRI EQ+KMF+ARK
Sbjct: 836 TELEAT----QPVSPWGNLDHLLDGYDDKQKALIQKERARRITEQHKMFSARKLCLVLDL 891
Query: 3008 XXXXXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKAS 3187
NSAKFIEV+ HE++LR+KEEQD+ + +RHL+RF HM MWTKLRPGIWNFLEKAS
Sbjct: 892 DHTLLNSAKFIEVEPIHEEMLRKKEEQDRTLPERHLYRFHHMNMWTKLRPGIWNFLEKAS 951
Query: 3188 NLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERVPKSKDLDGVL 3367
NL+ELHLYTMGNKLYATEMAKVLDPTGTLFAGRVIS+GDD D FD DERVPKSKDLDGVL
Sbjct: 952 NLFELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDERVPKSKDLDGVL 1011
Query: 3368 GMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTL 3547
GMESAVVIIDDSVRVWPHN+ NLIVVERYTYFP SRRQFGL GPSLLEID DERPEDGTL
Sbjct: 1012 GMESAVVIIDDSVRVWPHNRHNLIVVERYTYFPCSRRQFGLPGPSLLEIDRDERPEDGTL 1071
Query: 3548 ASSLAVIERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGEANPHMHPL 3727
ASSLAVIER+H NFFSH +L + DVR+ILA+EQR+ILAGCRIVFSR+FPVG+A+PH+HPL
Sbjct: 1072 ASSLAVIERIHHNFFSHPNLNEADVRSILASEQRRILAGCRIVFSRVFPVGDASPHLHPL 1131
Query: 3728 WQTAEQFGAVC 3760
WQTAEQFGAVC
Sbjct: 1132 WQTAEQFGAVC 1142
>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
notabilis]
Length = 1301
Score = 795 bits (2053), Expect = 0.0
Identities = 533/1268 (42%), Positives = 707/1268 (55%), Gaps = 135/1268 (10%)
Frame = +2
Query: 362 RPRGGRAL-DGETSDVDSSESLEEISAEDF-KQEGRA-------------------GRSR 478
R GR + D E ++ S S+EEIS EDF KQEG G SR
Sbjct: 3 RIESGRVVEDVEEGEISDSASVEEISEEDFNKQEGNGTGSGKVMSVSDSNSKESKFGDSR 62
Query: 479 VWM------GYPMSKNYGPSLYNFAWAQAVQNKPLG-LDLKPMSAGDLTDNVDAKGKPQ- 634
VW YP + Y LYN AWAQAVQNKPL + + + A D + V + P
Sbjct: 63 VWTMRDLYANYPGFRGYTTGLYNLAWAQAVQNKPLNEIFVMDVDADDSSRVVLSSASPAV 122
Query: 635 --------------EEAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQL 772
E+ V+++DS+ E +
Sbjct: 123 NSGRREGKNGVKEVEKVEKVVIDDSADEMEEG-----------------------ELEEG 159
Query: 773 SSDIPENEPEKKESDGEELQD------------------ISEFDKRISLILEELDTITVE 898
D+ E+EP +K + GEE +D E +KR+ LI E L ++ V
Sbjct: 160 EIDL-ESEPTQKPA-GEEAKDGDLNCEAENVGGLEVDSRRDELEKRVDLIWETLGSVNVV 217
Query: 899 EAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQAVMAIQTTYSALNSVTMQKK 1078
AE SFE VC RL+++ E L+ + + E S Q ++ AIQ S S+++ +K
Sbjct: 218 NAEKSFEEVCSRLQRTLESLRGVLSEKEFSFPTKDVVIQMSITAIQVVNSVFCSMSVNQK 277
Query: 1079 DQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLV---------FEDNKKEK----- 1216
+Q K+ L RL +KN + LF+ EQ KEI+ +++SL D +KE
Sbjct: 278 EQKKETLSRLFCSVKNCGTPLFSPEQTKEIELMISSLNPLNVLPSSGASDKEKETQIIER 337
Query: 1217 -----ADLTNGPV--VSLHGSNV-LEKACLVP----EALDLPKLVLP--TRSKNRVDFSP 1354
++LTN S+ ++V L + C+ + LP+L+ P K R P
Sbjct: 338 LHEMDSNLTNANAENASIERTSVKLPQDCVASVVHSNPITLPELLRPGTLAFKGRGLLLP 397
Query: 1355 LLDLHADYNEDSLPSPTRENLPKFSIPKPIGL--GMVLPVSSQPITAKNGGEDVMLHPYV 1528
LLDLH D++ DSLPSPTRE F + KP+G+ G++ PVS+ A G E+ LH Y
Sbjct: 398 LLDLHKDHDADSLPSPTREAPSCFPVYKPLGVADGIIKPVSTTAKVAP-GAEESRLHRYE 456
Query: 1529 TDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXXCNPRAVHAAT 1708
TDALKAVS+YQ KFG S L +DRLPSPTPSE+ + N R
Sbjct: 457 TDALKAVSTYQQKFGRGSFLMSDRLPSPTPSEECDEEDDINQEVSSSLTSGNLRTPAIPI 516
Query: 1709 QFQMVKSRS---SAPCTNSSISNQSHPVEQLNPMSKPALKPALKRRDPRLKFVNNEVKSI 1879
V + S S+P I+ ++ + S +K + + RDPRL+F N++ ++
Sbjct: 517 LRPSVVTSSVPVSSPTMQGPIAAKN--AAPVGSGSNSTMKASARSRDPRLRFANSDAGAL 574
Query: 1880 SDEGRVTE-----PDLLKSDPVGVATNSKKHKTDESVARDH-MMKKQRHKLTTSR-EMET 2038
R P + DP T+S+K + E D +K+QRH +++ +++T
Sbjct: 575 DLNQRPLTAVHNGPKVEPGDP----TSSRKQRIVEEPNLDGPALKRQRHAFVSAKIDVKT 630
Query: 2039 ASG-SGWSEAKNVI-PQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLRS 2212
ASG GW E PQ K Q+ EN + D RKS PI +N + G
Sbjct: 631 ASGVGGWLEDNGTTGPQIMNKNQLVENAEADPRKSIHLV----NGPIMNNGPN--IGKEQ 684
Query: 2213 IPKSNPTPTISLPSLLK--AVNPTILLQ-LHQMEQQRIAAENQKKNAVSTSDSANVLSVN 2383
+P + + +LP++LK AVNPTI + L+++ QQ++ A + ++ + S+ ++ + N
Sbjct: 685 VPVTGTSTPDALPAILKDIAVNPTIFMDILNKLGQQQLLAADAQQKSDSSKNTTHPPGTN 744
Query: 2384 ELPGTVASINSTPLKSKESGLNQ-PGISL-IPSQMASSSTQPDVARIRMKPRDPRRILHD 2557
+ G +N P SK SG+ Q P +SL SQ+A++S Q ++ +IRMKPRDPRR+LH
Sbjct: 745 SILGAAPLVNVAP--SKASGILQTPAVSLPTTSQVATASMQDELGKIRMKPRDPRRVLHG 802
Query: 2558 NMVQKNDGVVYQQSK-------------------IDAAASD----PQSSLVRLAAPLQLT 2668
NM+QK+ + ++Q K + +D P +V+ Q T
Sbjct: 803 NMLQKSWSLGHEQFKPIVSSVSCTPGNKDNLNGPVQEGQADKKQVPSQLVVQPDIARQFT 862
Query: 2669 KNLANVLXXXXXXXXXXXXXXCN----NQPVASQADQVIVEAASGELNDSETTSLLVSEV 2836
KNL N+ + +QP+ + D+ V+A D + + E
Sbjct: 863 KNLRNIADLMSVSQASTSPATVSQNLSSQPLPVKPDRGDVKAVVPNSEDQHSGTNSTPET 922
Query: 2837 GSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXX 3016
+R + N WGDV+HLF+GY+DEQKA IQ+ER+RR+ EQ KMF A K
Sbjct: 923 TLAVPSR-TPNAWGDVEHLFEGYDDEQKAAIQRERARRLEEQKKMFDAHKLCLVLDLDHT 981
Query: 3017 XXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLY 3196
NSAKF+EVD H++ILR+KEEQD+E QRHLFRF HMGMWTKLRPG+WNFLEKAS LY
Sbjct: 982 LLNSAKFVEVDSVHDEILRKKEEQDREKPQRHLFRFPHMGMWTKLRPGVWNFLEKASKLY 1041
Query: 3197 ELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERVPKSKDLDGVLGME 3376
ELHLYTMGNKLYATEMAKVLDP GTLF+GRVIS+GDD D FDGDERVPKSKDL+GVLGME
Sbjct: 1042 ELHLYTMGNKLYATEMAKVLDPMGTLFSGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1101
Query: 3377 SAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASS 3556
S+VVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGL GPSLLEIDHDERPE GTLASS
Sbjct: 1102 SSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEQGTLASS 1161
Query: 3557 LAVIERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGEANPHMHPLWQT 3736
LAVIE++HQNFFSH+SL +VDVRNILA+EQRKILAGCRIVFSR+FPV E NPH+HPLWQT
Sbjct: 1162 LAVIEKIHQNFFSHHSLDEVDVRNILASEQRKILAGCRIVFSRVFPVSEVNPHLHPLWQT 1221
Query: 3737 AEQFGAVC 3760
AEQFGAVC
Sbjct: 1222 AEQFGAVC 1229
>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao]
Length = 1290
Score = 790 bits (2041), Expect = 0.0
Identities = 541/1262 (42%), Positives = 695/1262 (55%), Gaps = 104/1262 (8%)
Frame = +2
Query: 287 MLFAGSNLLFLNH--SEEKPLDLMARERPRGGRALDGETSDVDSSESLEEISAEDFKQE- 457
M GSN + + E+ L M ++ + +GE SD S S+EEIS EDF ++
Sbjct: 1 MYVVGSNWIEWSKLKKNEETLGEMGKDETKVEDVEEGEISD---SASIEEISEEDFNKQD 57
Query: 458 ------------GRAG-RSRVWM-----GYP-MSKNYGPSLYNFAWAQAVQNKPL----- 565
G A SRVW YP + + Y LYNFAWAQAVQNKPL
Sbjct: 58 VKILKESKSSKGGEANSNSRVWTMQDLCKYPSVIRGYASGLYNFAWAQAVQNKPLNEIFV 117
Query: 566 -------------GLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQXXXXXXXXXXX 706
P S+ ++ + KG A V+++D S+
Sbjct: 118 KDFEQPQQDENKNSKRSSPSSSVASVNSKEEKGSSGNLAVKVVIDDDSEDEMEEDKVVNL 177
Query: 707 XXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKK--ESDGEELQDISEFDKRISLILEEL 880
E + D+ ++EP++K S+ + + E +KR +LI L
Sbjct: 178 DKEE------------GELEEGEIDL-DSEPKEKVLSSEDGNVGNSDELEKRANLIRGVL 224
Query: 881 DTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQAVMAIQTTYSALNS 1060
+ +TV EAE SFE VC RL + E L+ + +E S Q A AI + + ALN
Sbjct: 225 EGVTVIEAEKSFEGVCSRLHNALESLRALI--LECSVPAKDALIQLAFGAINSAFVALN- 281
Query: 1061 VTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL---------------VF 1195
K+QN +L RLL +K LF +++KEID ++ SL V
Sbjct: 282 --CNSKEQNVAILSRLLSIVKGHDPSLFPPDKMKEIDVMLISLNSPARAIDTEKDMKVVD 339
Query: 1196 EDNKKEKADLTNGPVVSLHGSNVLEKACLV-----PEALDLPKLVLPTRSKNRVDFSPLL 1360
NKK+ L L +N L + P AL +NR PLL
Sbjct: 340 GVNKKDPDALPENICHDLTVTNKLPSSAKFVINNKPNALTETLKPGVPNFRNRGISLPLL 399
Query: 1361 DLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAK--NGGEDVMLHPYVTD 1534
DLH D++ DSLPSPTRE P + KP+ G V+ V S +T K + E LHPY TD
Sbjct: 400 DLHKDHDADSLPSPTRETTPCLPVNKPLTSGDVM-VKSGFMTGKGSHDAEGDKLHPYETD 458
Query: 1535 ALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGG-QGXXXXXXXXXXXXXCNPRAVHAATQ 1711
ALKA S+YQ KFG S S+DRLPSPTPSE+ G +G N +
Sbjct: 459 ALKAFSTYQQKFGQGSFFSSDRLPSPTPSEESGDEGGDNGGEVSSSSSIGNFKPNLPILG 518
Query: 1712 FQMVKSRSSAPCTNSSISNQ--SHPVEQLNPMSKPALKPALKRRDPRLKFVNNEVKSISD 1885
+V S +SS+ Q + ++ +S K K RDPRL F N+ ++
Sbjct: 519 HPIVSSAPLVDSASSSLQGQITTRNATPMSSVSNIVSKSLAKSRDPRLWFANSNASALDL 578
Query: 1886 EGRVTEPDLLKSDPVGVATNSKKHKT-DESVARDHMMKKQRHKLT---TSREMETASG-S 2050
R+ + K PVG +S+K K+ +E + +K+QR++L +R+++T SG
Sbjct: 579 NERLLH-NASKVAPVGGIMDSRKKKSVEEPILDSPALKRQRNELENLGVARDVQTVSGIG 637
Query: 2051 GWSEAKNVI-PQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLRSIPKSN 2227
GW E + I Q + + Q EN + + RK V + + +P ++
Sbjct: 638 GWLEDTDAIGSQITNRNQTAENLESNSRKMDN--GVTSSSTLSGKTNITVGTNEQVPVTS 695
Query: 2228 PTPTISLPSLLK--AVNPTILLQLHQM-EQQRIAAENQKKNAVSTSDSANVLSVNELPGT 2398
T T SLP+LLK AVNPT+L+ + +M +QQR+ AE Q+K+ + + S N L G
Sbjct: 696 -TSTPSLPALLKDIAVNPTMLINILKMGQQQRLGAEAQQKSPDPVKSTFHQPSSNSLLGV 754
Query: 2399 VASINSTPLKSKESGLN-QPGISLIPSQMASSSTQPDVARIRMKPRDPRRILHDNMVQKN 2575
V+S N P S + + GIS P+ + + +IRMKPRDPRR+LH N +Q++
Sbjct: 755 VSSTNVIPSPSVNNVPSISSGISSKPAGNLQVPSPDESGKIRMKPRDPRRVLHGNSLQRS 814
Query: 2576 DGVVYQQSKIDAA-ASDPQSSLVRLAA----------PL------------QLTKNLANV 2686
+ Q K + A S Q S L A P+ Q T NL N+
Sbjct: 815 GSMGLDQLKTNGALTSSTQGSKDNLNAQKLDSQTESKPMQSQLVPPPDITQQFTNNLKNI 874
Query: 2687 LXXXXXXXXXXXXXXCNN----QPVASQADQVIVEAASGELNDSETTSLLVSEVGSEKGT 2854
++ QPV ++D + ++A D +T + L E G+ G
Sbjct: 875 ADIMSVSQALTSLPPVSHNLVPQPVLIKSDSMDMKALVSNSEDQQTGAGLAPEAGA-TGP 933
Query: 2855 RQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNSAK 3034
R S N WGDV+HLF+ Y+D+QKA IQ+ER+RRI EQ KMF+ARK NSAK
Sbjct: 934 R-SQNAWGDVEHLFERYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAK 992
Query: 3035 FIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYT 3214
FIEVD HE+ILR+KEEQD+E +RHLFRF HMGMWTKLRPGIWNFLEKAS LYELHLYT
Sbjct: 993 FIEVDPVHEEILRKKEEQDREKPERHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYT 1052
Query: 3215 MGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERVPKSKDLDGVLGMESAVVII 3394
MGNKLYATEMAKVLDP G LFAGRVIS+GDD D FDGDERVP+SKDL+GVLGMESAVVII
Sbjct: 1053 MGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESAVVII 1112
Query: 3395 DDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIER 3574
DDSVRVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIER
Sbjct: 1113 DDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIER 1172
Query: 3575 LHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGA 3754
+HQ+FFSH +L DVDVRNILA+EQRKILAGCRIVFSR+FPVGEANPH+HPLWQTAEQFGA
Sbjct: 1173 IHQDFFSHQNLDDVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGA 1232
Query: 3755 VC 3760
VC
Sbjct: 1233 VC 1234
>gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Zea mays]
Length = 1234
Score = 769 bits (1985), Expect = 0.0
Identities = 512/1253 (40%), Positives = 681/1253 (54%), Gaps = 116/1253 (9%)
Frame = +2
Query: 350 MARERPR------GGRALD-----GETSDVDSSESLEEISAEDFKQEGRAG--------- 469
MARE+PR GG + GE SD DSS S+EEI+A+DFK++ +
Sbjct: 1 MAREQPRSAVVAAGGDLVTAAGGGGEGSDRDSSGSIEEITADDFKKDSSSALGGAAAAAG 60
Query: 470 -RSRVWMGYP----MSKNYGPSLYNFAWAQAVQNKPLGL------DLKPMSAGDLTDNVD 616
RSR W+ P M++N+ + +FAW+QAV+NKPLGL D + A D++D
Sbjct: 61 PRSRSWVAPPAVGYMARNFRYAFNSFAWSQAVRNKPLGLQPPAPDDDEVEHAVDVSDGEK 120
Query: 617 AKGKPQE-EAYDVIVEDSSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPEN 793
+G+ +E EA + + + ET L SD PE
Sbjct: 121 EEGEIEEGEAVEALASPAPAQP--------------------------ETIDLDSDAPEK 154
Query: 794 EPEKKESDGE---------ELQDISEFDKRISLILEELDTITVEEAET------------ 910
E DG E ++++ D+R+ ILEEL+ +++EEAE
Sbjct: 155 S-ESVAIDGSASVVPVPAAEEEEVN-LDQRVGSILEELEMVSIEEAEKYMGICFMFFLEQ 212
Query: 911 -----SFEAVCLRLRKSFEDLKPMFTGIESSD--TXXXXXXQQAVMAIQTTYSALNSVTM 1069
SFE C RL FE+LKP+F +E+ QQA + I T + N +
Sbjct: 213 RLCFRSFEGACARLHTCFENLKPLFQELENGSPMAILEPLMQQAFIGIDTLTTVANLYNL 272
Query: 1070 QKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVF--EDNKKEKADL--TNGP 1237
+++QNK LL+LL HIKN+YS + T EQ +E+D+ V LVF +DN + + T+
Sbjct: 273 PRREQNKTTLLKLLFHIKNRYSDMLTPEQREEMDSRVRKLVFGEKDNVSDPSTSCGTSAI 332
Query: 1238 VVSLHGSNVLEKACLVPEA------LDLPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPS 1399
VS V L E+ LP+L +P + SPLL+LHADY+E+SLPS
Sbjct: 333 NVSAPSGQVSNTGGLPFESGAANLFSSLPRLEVPAKRN-----SPLLNLHADYDENSLPS 387
Query: 1400 PTRENLPKFSIPKPIGLGMVLPVSSQPITAKNGGEDVM--LHPYVTDALKAVSSYQLKFG 1573
PTR+N P F KPIG G P+ + ++ + E L+P + D LKAVSSYQ K+G
Sbjct: 388 PTRDNAPPFPALKPIGFG-AFPMVPEKLSFLDRVEPTKNSLYPPLNDPLKAVSSYQQKYG 446
Query: 1574 SNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXXCN-PRAVHAATQFQMVKSR------ 1732
S+ +D LPSPTPS D G+ P+++ + QM S+
Sbjct: 447 QKSVYPSDDLPSPTPSGDEGKPADKGGDIFSDVSSFPVPKSIVLPSTSQMPASQPSTVSS 506
Query: 1733 -------------SSAPCTNSS--ISNQSHP------VEQLNPMSKPALKPALKRRDPRL 1849
+S P T SS IS S P +EQ A+K A K RDPRL
Sbjct: 507 SSISYASSTSQMAASQPITVSSSGISYASGPPGFAKQIEQSTAGPNHAIKAASKSRDPRL 566
Query: 1850 KFVNNEVKSISDEG-RVTEPDLLKSDPVGVATNSKKHKT-DESVARDHMMKKQRHKLTTS 2023
+F+N + +D R +L + GV+ ++K K D+ D+ +K+ R +
Sbjct: 567 RFLNRDSAGATDVNWRANFSELKDGNLGGVSVGNRKQKAVDDPQVDDNALKRFRGGIANQ 626
Query: 2024 REMETASGSGWSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSG 2203
R+M+ N N +++R ++++ N L
Sbjct: 627 RDMQPTG--------------------NPNQLMNIRAPTHSSSI---------NMKTLQP 657
Query: 2204 LRSI-PKSNPTPTISLPSLLK---AVNPTILLQLHQMEQQRIAAENQKKNAVSTSDSANV 2371
++ P + P + LP +L AVNP +L+ L QME Q+ +A S ++
Sbjct: 658 PQTTAPHVSAAPAVPLPPMLLKDIAVNPALLMHLIQMEHQKKSASE------SQGGMSSG 711
Query: 2372 LSVNELPGTVASINSTPLKSKESGLNQPGISLIPSQMASSSTQPDVARIRMKPRDPRRIL 2551
++ N + G V + + P K E+ +P Q ++Q D +RMKPRDPRRIL
Sbjct: 712 MTNNGIAGMVFTPGNAP-KITEAAQVPSVRPQVPVQTPPLNSQNDGGIVRMKPRDPRRIL 770
Query: 2552 HDNMVQKNDGVVYQQSKIDAAASDPQSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXX 2731
H+N+ QK+D + +Q K + P+ L + +
Sbjct: 771 HNNIAQKSDAMSLEQVKNNGTTQPDSQGTKDQTTPVPSQPALPSSIARPFSSAKHVDPV- 829
Query: 2732 CNNQPVASQADQVIVEAASG----------ELNDSETTSLLVSEVGSEKGTRQSANPWGD 2881
+N +A+ A +A S E N + + Q +PWGD
Sbjct: 830 -SNSQLAATAIMAPTQALSSVNKVDPRLAVEQNGQNADATTNGASATTLEATQPVSPWGD 888
Query: 2882 VDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNSAKFIEVDLAHE 3061
VDHL DGY+D+QKA IQKER+RRI EQ+KMF+ARK NSAKFIEV+ HE
Sbjct: 889 VDHLLDGYDDQQKALIQKERARRITEQHKMFSARKLCLVLDLDHTLLNSAKFIEVEPIHE 948
Query: 3062 DILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATE 3241
++LR+KEEQD+ + +RHL+RF HM MWTKLRPGIWNFL+KASNL+ELHLYTMGNKLYATE
Sbjct: 949 EMLRKKEEQDRTLPERHLYRFHHMNMWTKLRPGIWNFLQKASNLFELHLYTMGNKLYATE 1008
Query: 3242 MAKVLDPTGTLFAGRVISKGDDADTFDGDERVPKSKDLDGVLGMESAVVIIDDSVRVWPH 3421
MAKVLDPTGTLFAGRVIS+GDD D FD DERVPKSKDLDGVLGMESAVVIIDDSVRVWPH
Sbjct: 1009 MAKVLDPTGTLFAGRVISRGDDGDPFDSDERVPKSKDLDGVLGMESAVVIIDDSVRVWPH 1068
Query: 3422 NKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERLHQNFFSHN 3601
N+ NLIVVERYTYFP SRRQFGL GPSLLEID DERPEDGTLASSLAVIER+H NFFSH
Sbjct: 1069 NRHNLIVVERYTYFPCSRRQFGLPGPSLLEIDRDERPEDGTLASSLAVIERIHHNFFSHP 1128
Query: 3602 SLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 3760
+L + DVR+ILA+EQR+IL GCRIVFSR+FPVG+A+PH+HPLWQTAEQFGAVC
Sbjct: 1129 NLNEADVRSILASEQRRILTGCRIVFSRVFPVGDASPHLHPLWQTAEQFGAVC 1181
>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Vitis vinifera]
Length = 1238
Score = 762 bits (1967), Expect = 0.0
Identities = 512/1208 (42%), Positives = 668/1208 (55%), Gaps = 83/1208 (6%)
Frame = +2
Query: 386 DGETSDVDSSESLEEISAEDF-KQEGRAGR-------SRVWMGYPMS---------KNYG 514
D E ++ S S+EEIS EDF KQE R R +RVW + Y
Sbjct: 14 DVEEGEISDSASVEEISEEDFNKQEVRVLREAKPKADTRVWTMRDLQDLYKYHQACSGYT 73
Query: 515 PSLYNFAWAQAVQNKPLG-------LDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQ 673
P LYN AWAQAVQNKPL + K S+ T D+ +E VI++DS
Sbjct: 74 PRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTSRDDSSS--AKEVAKVIIDDSGD 131
Query: 674 XXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKKESDGEELQDISEFDK 853
+ + NEPE + E ++
Sbjct: 132 EMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLKERELVE------- 184
Query: 854 RISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMF---TGIESSDTXXXXXXQQAV 1024
R+ I E+L+++TV EAE SF VC RL+ + L+ +F ESS QQ +
Sbjct: 185 RVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLI 244
Query: 1025 MAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL--VFE 1198
AI+ S+ +K+ NK + RLL ++ S +F+++ +KE++ +++ L
Sbjct: 245 NAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAA 304
Query: 1199 DNKKEKADLTNG-PVVSLHGSNVLE-------KACLVPEALDLPKLVLPTRSKNRVD--- 1345
+ E +D N V N+L+ +A + L L + + + ++N D
Sbjct: 305 QSSAEASDKVNDVQVTDGMNRNILDSSVESSGRAFASAKKLSLDSISVESYNQNNPDALK 364
Query: 1346 -----------FSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAK 1492
F PLLDLH D++EDSLPSPT + F + K S+ +TAK
Sbjct: 365 PGLSSSRGRFIFGPLLDLHKDHDEDSLPSPTGKAPQCFPVNK-----------SELVTAK 413
Query: 1493 NGGE--DVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQ--GXXXXXXX 1660
E D ++HPY TDALKAVS+YQ KFG S L D+LPSPTPSE+ G G
Sbjct: 414 VAHETQDSIMHPYETDALKAVSTYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVS 473
Query: 1661 XXXXXXCNPRAVHAATQFQMVKSRSSAPCTNSSI-----SNQSHPVEQLNPMSKPALKPA 1825
A A +V SSAP +SSI ++ + P ++ +
Sbjct: 474 SSSTISAPITANAPALGHPIV---SSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVAS 530
Query: 1826 LKRRDPRLKFVNNEVKS--ISDEGRVTEPDLLKSDPVGVATNSKKHKTDESVARD-HMMK 1996
K RDPRL+ +++ S +++ + K DP+G +S+K K+ E D + K
Sbjct: 531 AKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTK 590
Query: 1997 KQRHKLT---TSREMETASGS-GWSEAKN-VIPQPSFKIQVNENFQVDVRKSGTAAAVPD 2161
+QR+ LT T R+ +T S GW E N VIPQ + Q+ EN D +K + V
Sbjct: 591 RQRNGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGTDPKKLESKVTVTG 650
Query: 2162 KKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQL-HQMEQQRIAAENQ 2332
D + ++G +P + T SL SLLK AVNP + + + +++EQQ+ + +
Sbjct: 651 IG--CDKPYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNKVEQQK--SGDP 706
Query: 2333 KKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGLNQPGISLIPSQMASSSTQPDVA 2512
KN V S ++L V P +VA + + L K +G Q+ + +
Sbjct: 707 AKNTVLPPTSNSILGVVP-PASVAPLKPSALGQKPAG---------ALQVPQTGPMDESG 756
Query: 2513 RIRMKPRDPRRILHDNMVQKNDGVVYQQSKIDAAASDPQSSLVRLAA--------PLQLT 2668
++RMKPRDPRRILH N Q++ +Q K +A + Q+ + + Q T
Sbjct: 757 KVRMKPRDPRRILHANSFQRSGSSGSEQFKTNAQKQEDQTETKSVPSHSVNPPDISQQFT 816
Query: 2669 KNLANVL----XXXXXXXXXXXXXXCNNQPVASQADQVIVEAASGELNDSETTSLLVSEV 2836
KNL N+ ++Q V D++ V+A + D T + S+
Sbjct: 817 KNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKATVSDSGDQLTAN--GSKP 874
Query: 2837 GSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXX 3016
S G QS N WGDV+HLFDGY+D+QKA IQ+ER+RRI EQ KMF+ARK
Sbjct: 875 ESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHT 934
Query: 3017 XXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLY 3196
NSAKF+EVD H++ILR+KEEQD+E SQRHLFRF HMGMWTKLRPGIWNFLEKAS LY
Sbjct: 935 LLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLY 994
Query: 3197 ELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERVPKSKDLDGVLGME 3376
ELHLYTMGNKLYATEMAKVLDP G LFAGRVISKGDD D DGDERVPKSKDL+GVLGME
Sbjct: 995 ELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGME 1054
Query: 3377 SAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASS 3556
SAVVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGL GPSLLEIDHDERPEDGTLASS
Sbjct: 1055 SAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASS 1114
Query: 3557 LAVIERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGEANPHMHPLWQT 3736
LAVIER+HQ+FFS+ +L +VDVRNILA+EQRKILAGCRIVFSR+FPVGEANPH+HPLWQT
Sbjct: 1115 LAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQT 1174
Query: 3737 AEQFGAVC 3760
AE FGAVC
Sbjct: 1175 AESFGAVC 1182
>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343308|gb|EEE79627.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1247
Score = 743 bits (1917), Expect = 0.0
Identities = 500/1219 (41%), Positives = 662/1219 (54%), Gaps = 90/1219 (7%)
Frame = +2
Query: 374 GRALDGETSDVDSSESLEEISAEDF-KQE--------------GRAGRSRVWM-----GY 493
G+ D E ++ + S+EEIS +DF KQE + + +VW Y
Sbjct: 15 GKMEDVEEGEISDTASVEEISEDDFNKQEVVVVKETPSSTTNNNSSSKQKVWTVRDLYKY 74
Query: 494 PMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTD--NVDAKGKPQEEAYDVIVEDS 667
+ Y LYN AWAQAVQNKPL + D + +V + +E+ V+++DS
Sbjct: 75 QVGGGYMSGLYNLAWAQAVQNKPLNELFVEVEVDDSSQKSSVSSVNSSKEDKRTVVIDDS 134
Query: 668 SQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKKESDGEELQDISEF 847
+ E +L + + E K G D
Sbjct: 135 GDEMDVVKVID----------------IEKEEGELEEGEIDLDSEGKSEGGMVSVDT--- 175
Query: 848 DKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQAVM 1027
+KR+ I E+L++++V + + SFEAVCL+L + E LK + E+ +
Sbjct: 176 EKRVKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLLFT 235
Query: 1028 AIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEI------DTLVNSL 1189
AI S +S+ + K+QNK + +R L + + F+ E KE+ D + SL
Sbjct: 236 AIGAVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEVCDFCNFDFRIVSL 295
Query: 1190 VFEDNKKEKADLTN-GPVVSLHGSNVLEKACLVPEALDLPKLVLPTRSKNRVDFSPLLDL 1366
+ DLT + S S V K +++ PK +P+ K+R PLLDL
Sbjct: 296 CY--------DLTTMNRLPSAAESFVHNKPNF---SIEPPKPGVPS-FKSRGVLLPLLDL 343
Query: 1367 HADYNEDSLPSPTRENLPKFSIPK--PIGLGMVLPVSSQPITAKNGGEDVMLHPYVTDAL 1540
++EDSLPSPTRE P F + + PIG GM+ P A E+ +HPY TDAL
Sbjct: 344 KKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVASIT-EEPRVHPYETDAL 402
Query: 1541 KAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXXCNPRAVHAATQFQM 1720
KAVSSYQ KF NS T+ LPSPTPSE+ G G N R V+ +
Sbjct: 403 KAVSSYQKKFNLNSFF-TNELPSPTPSEESGNGDGDTAGEVSSSSTVNYRTVNPPVSDRK 461
Query: 1721 VKSRSSAP-------------CTNSSISNQSHPVEQLNPMSK---PALKPALKRRDPRLK 1852
S S +P NSSI P P+S +K + K RDPRL+
Sbjct: 462 SASPSPSPPPPPPPPPPPPPHLNNSSI-RVVIPTRNSAPVSSGTSSTVKASAKSRDPRLR 520
Query: 1853 FVNNEVKSISDEGR----VTEPDLLKSDPVGVATNSKKHKTDESVARDHMMKKQRHKLTT 2020
+VN + ++ R V P +++P G S+K K +E V +K+QR+
Sbjct: 521 YVNTDASALDQNQRTLLMVNNPP--RAEPSGAIAGSRKQKIEEDVLDGTSLKRQRNSFDN 578
Query: 2021 S---REMETASGSG-WSEAKNVI-PQPSFKIQVNENFQVDVRKSG-----TAAAVPDKKP 2170
R++ + +G+G W E ++ PQ K Q EN + R + + +V
Sbjct: 579 FGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEPGQRINNGVVCPSTGSVMSSVS 638
Query: 2171 IFDNNFDELSGLRSIPKSNPTP-----TISLPSLLK--AVNPTILLQLHQM-EQQRIAAE 2326
N + G+ +I S P T SLP LLK VNPT+L+ + +M +QQR+A +
Sbjct: 639 CSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINILKMGQQQRLALD 698
Query: 2327 NQKKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGL--NQPGISLIPSQMASSSTQ 2500
Q+K A +++ S N + G + +N+ + S SG+ G + PSQ+A T
Sbjct: 699 GQQKLADPAKSTSHPPSSNTVLGAIPEVNA--VSSLPSGILPRSAGKAQGPSQIA---TT 753
Query: 2501 PDVARIRMKPRDPRRILHDNMVQKNDGVVYQQSKIDAAASDPQSSL-------------V 2641
+ +IRMKPRDPRR+LH+N +Q+ + +Q K S Q + +
Sbjct: 754 DESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLTSTTQGTKDNQNLQKQEGLAEL 813
Query: 2642 RLAAPLQL----TKNLANVLXXXXXXXXXXXXXXCNNQPVASQADQVIVEAASGELNDSE 2809
+ P + TK+L N+ + Q VASQ Q+ + G+ S
Sbjct: 814 KPVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVS-QNVASQPVQIKSDRVDGKTGISN 872
Query: 2810 TTSLLVSEVGSE--KGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAAR 2983
+ + E + S N W DV+HLF+GY+D+QKA IQ+ER+RRI EQ K+FAAR
Sbjct: 873 SDQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFAAR 932
Query: 2984 KXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGI 3163
K NSAKF+EVD H++ILR+KEEQD+E RHLFRF HMGMWTKLRPGI
Sbjct: 933 KLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGI 992
Query: 3164 WNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERVPK 3343
WNFLEKAS LYELHLYTMGNKLYATEMAKVLDP G LFAGRV+S+GDD D DGDERVPK
Sbjct: 993 WNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDLLDGDERVPK 1052
Query: 3344 SKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHD 3523
SKDL+GVLGMES VVIIDDS+RVWPHNKLNLIVVERY YFP SRRQFGL GPSLLEIDHD
Sbjct: 1053 SKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHD 1112
Query: 3524 ERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGE 3703
ERPEDGTLA SLAVIER+HQNFF+H+SL + DVRNILA+EQRKILAGCRIVFSR+FPVGE
Sbjct: 1113 ERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILAGCRIVFSRVFPVGE 1172
Query: 3704 ANPHMHPLWQTAEQFGAVC 3760
NPH+HPLWQ+AEQFGAVC
Sbjct: 1173 VNPHLHPLWQSAEQFGAVC 1191
>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 3-like
[Citrus sinensis] gi|557541056|gb|ESR52100.1|
hypothetical protein CICLE_v10030535mg [Citrus
clementina]
Length = 1234
Score = 741 bits (1912), Expect = 0.0
Identities = 512/1241 (41%), Positives = 674/1241 (54%), Gaps = 116/1241 (9%)
Frame = +2
Query: 386 DGETSDVDSSESLEEISAEDFK--QE---------------GRAGRSRVWM------GYP 496
D E ++ + S+EEIS EDFK QE G +RVW YP
Sbjct: 4 DVEEGEISDTASVEEISEEDFKIKQEEVVKVVKETKPIKVGGGEAAARVWTMRDLYNKYP 63
Query: 497 -MSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQ 673
+ + YGP L+N AWAQAVQNKPL ++ M A D+V + P V
Sbjct: 64 AICRGYGPGLHNLAWAQAVQNKPLN-EIFVMEAEQ--DDVSKRSSPASSVASV------- 113
Query: 674 XXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKKESDGEELQDISEFDK 853
V+D+ S D E E + E EL SE ++
Sbjct: 114 --------NSGAAAGKDDKKVVEKVVIDD----SGDEIEKEEGELEEGEIELDLESESNE 161
Query: 854 RIS-LILEELDTITVE----------EAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXX 1000
++S + EE+ I VE + SFE VC +L + E L+ + E++
Sbjct: 162 KVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLRELVN--ENNVPTK 219
Query: 1001 XXXXQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLV 1180
Q A A+Q+ +S S+ K+QNK++L RLL IK+ LF+ Q+KE++ ++
Sbjct: 220 DALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAML 279
Query: 1181 NSLVFEDNKKEKADLTNGPVVSLHGSNVLEKACLVPEALD----LPKLVLPTRS------ 1330
+SLV N KEK ++++HG N + + A++ K+ LP S
Sbjct: 280 SSLVTRANDKEK------DMLAMHGVNGKDSNIVTENAVNDLNFKEKVPLPVDSLMQNKP 333
Query: 1331 -----------KNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQ 1477
++R PLLD H ++ DSLPSPTRE P + + + +G + S
Sbjct: 334 LEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWA 393
Query: 1478 PITAKNGGEDVMLHP-YVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXX 1654
+ +V P Y TDAL+A SSYQ KFG NS LPSPTPSE+ G G
Sbjct: 394 AAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTG 453
Query: 1655 XXXXXXXXCN-PRAVHAATQFQMVKSRS----SAPCTNSSI-----SNQSHPVEQ-LNPM 1801
+ P+ V+ T Q S S P SS+ +N S P NP+
Sbjct: 454 GEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPV 513
Query: 1802 SK--PALKPALKRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVATNSKKHKT-DES 1972
K P +K +K RDPRL+F ++ +++ + + K +PVG +S+K KT +E
Sbjct: 514 VKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEP 573
Query: 1973 VARDHMMKKQRHKLTTS---REMETASGS-GWSEAKNVIPQPSFKIQVNENFQVDVRKS- 2137
V +K+QR+ S R+ + GS GW E ++ +P +N N VD +S
Sbjct: 574 VLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMF-EPQI---MNRNLLVDSAESN 629
Query: 2138 ------GTAAAVPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQL 2293
G + + P +SG P + P+ T+SLP+LLK AVNPT+LL +
Sbjct: 630 SRKLDNGATSPITSGTPNV-----VVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNI 684
Query: 2294 HQM-EQQRIAAENQKKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGLNQPGISLI 2470
+M +QQ++AA+ Q+K ++DS+ +P ++ ++ T I
Sbjct: 685 LKMGQQQKLAADAQQK----SNDSSMNTMHPPIPSSIPPVSVT--------------CSI 726
Query: 2471 PSQMASSSTQPDVARIRMKPRDPRRILHDNMVQ---------KNDGV-----------VY 2590
PS + S ++ ++RMKPRDPRR+LH N +Q K DG +
Sbjct: 727 PSGIL-SKPMDELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGSKENLN 785
Query: 2591 QQSKIDAAASDP--QSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXXCNNQPVASQAD 2764
Q ++ A + P S+++ Q TKNL ++ ++P+ SQ
Sbjct: 786 FQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHI------ADFMSVSQPLTSEPMVSQNS 839
Query: 2765 QV---------IVEAASGELNDSETTSLLVSEVGSEKGTRQSANPWGDVDHLFDGYNDEQ 2917
+ ++A +D +T + E G QSA WGDV+HLF+GY+D+Q
Sbjct: 840 PIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAHPQSA--WGDVEHLFEGYDDQQ 897
Query: 2918 KATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQDKE 3097
KA IQKER+RR+ EQ KMF+ARK NSAKF EVD H++ILR+KEEQD+E
Sbjct: 898 KAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDRE 957
Query: 3098 MSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLF 3277
RHLFRF HMGMWTKLRPGIW FLE+AS L+E+HLYTMGNKLYATEMAKVLDP G LF
Sbjct: 958 KPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLF 1017
Query: 3278 AGRVISKGDDADTFDGDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYT 3457
AGRVIS+GDD D FDGDERVPKSKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYT
Sbjct: 1018 AGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYT 1077
Query: 3458 YFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILA 3637
YFP SRRQFGLLGPSLLEIDHDER EDGTLASSL VIERLH+ FFSH SL DVDVRNILA
Sbjct: 1078 YFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILA 1137
Query: 3638 AEQRKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 3760
AEQRKILAGCRIVFSR+FPVGEANPH+HPLWQTAEQFGAVC
Sbjct: 1138 AEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVC 1178
>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|557541054|gb|ESR52098.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
Length = 1208
Score = 741 bits (1912), Expect = 0.0
Identities = 512/1241 (41%), Positives = 674/1241 (54%), Gaps = 116/1241 (9%)
Frame = +2
Query: 386 DGETSDVDSSESLEEISAEDFK--QE---------------GRAGRSRVWM------GYP 496
D E ++ + S+EEIS EDFK QE G +RVW YP
Sbjct: 4 DVEEGEISDTASVEEISEEDFKIKQEEVVKVVKETKPIKVGGGEAAARVWTMRDLYNKYP 63
Query: 497 -MSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQ 673
+ + YGP L+N AWAQAVQNKPL ++ M A D+V + P V
Sbjct: 64 AICRGYGPGLHNLAWAQAVQNKPLN-EIFVMEAEQ--DDVSKRSSPASSVASV------- 113
Query: 674 XXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKKESDGEELQDISEFDK 853
V+D+ S D E E + E EL SE ++
Sbjct: 114 --------NSGAAAGKDDKKVVEKVVIDD----SGDEIEKEEGELEEGEIELDLESESNE 161
Query: 854 RIS-LILEELDTITVE----------EAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXX 1000
++S + EE+ I VE + SFE VC +L + E L+ + E++
Sbjct: 162 KVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLRELVN--ENNVPTK 219
Query: 1001 XXXXQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLV 1180
Q A A+Q+ +S S+ K+QNK++L RLL IK+ LF+ Q+KE++ ++
Sbjct: 220 DALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQIKEMEAML 279
Query: 1181 NSLVFEDNKKEKADLTNGPVVSLHGSNVLEKACLVPEALD----LPKLVLPTRS------ 1330
+SLV N KEK ++++HG N + + A++ K+ LP S
Sbjct: 280 SSLVTRANDKEK------DMLAMHGVNGKDSNIVTENAVNDLNFKEKVPLPVDSLMQNKP 333
Query: 1331 -----------KNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQ 1477
++R PLLD H ++ DSLPSPTRE P + + + +G + S
Sbjct: 334 LEASKPGPPGYRSRGVLLPLLDPHKVHDVDSLPSPTRETTPSVPVQRALVVGDGVVKSWA 393
Query: 1478 PITAKNGGEDVMLHP-YVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXX 1654
+ +V P Y TDAL+A SSYQ KFG NS LPSPTPSE+ G G
Sbjct: 394 AAAKLSHNAEVHKTPHYETDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTG 453
Query: 1655 XXXXXXXXCN-PRAVHAATQFQMVKSRS----SAPCTNSSI-----SNQSHPVEQ-LNPM 1801
+ P+ V+ T Q S S P SS+ +N S P NP+
Sbjct: 454 GEISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPV 513
Query: 1802 SK--PALKPALKRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVATNSKKHKT-DES 1972
K P +K +K RDPRL+F ++ +++ + + K +PVG +S+K KT +E
Sbjct: 514 VKPNPVVKAPIKSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVGRVMSSRKQKTVEEP 573
Query: 1973 VARDHMMKKQRHKLTTS---REMETASGS-GWSEAKNVIPQPSFKIQVNENFQVDVRKS- 2137
V +K+QR+ S R+ + GS GW E ++ +P +N N VD +S
Sbjct: 574 VLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMF-EPQI---MNRNLLVDSAESN 629
Query: 2138 ------GTAAAVPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQL 2293
G + + P +SG P + P+ T+SLP+LLK AVNPT+LL +
Sbjct: 630 SRKLDNGATSPITSGTPNV-----VVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNI 684
Query: 2294 HQM-EQQRIAAENQKKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGLNQPGISLI 2470
+M +QQ++AA+ Q+K ++DS+ +P ++ ++ T I
Sbjct: 685 LKMGQQQKLAADAQQK----SNDSSMNTMHPPIPSSIPPVSVT--------------CSI 726
Query: 2471 PSQMASSSTQPDVARIRMKPRDPRRILHDNMVQ---------KNDGV-----------VY 2590
PS + S ++ ++RMKPRDPRR+LH N +Q K DG +
Sbjct: 727 PSGIL-SKPMDELGKVRMKPRDPRRVLHGNALQRSGSLGPEFKTDGPSAPCTQGSKENLN 785
Query: 2591 QQSKIDAAASDP--QSSLVRLAAPLQLTKNLANVLXXXXXXXXXXXXXXCNNQPVASQAD 2764
Q ++ A + P S+++ Q TKNL ++ ++P+ SQ
Sbjct: 786 FQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHI------ADFMSVSQPLTSEPMVSQNS 839
Query: 2765 QV---------IVEAASGELNDSETTSLLVSEVGSEKGTRQSANPWGDVDHLFDGYNDEQ 2917
+ ++A +D +T + E G QSA WGDV+HLF+GY+D+Q
Sbjct: 840 PIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAHPQSA--WGDVEHLFEGYDDQQ 897
Query: 2918 KATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQDKE 3097
KA IQKER+RR+ EQ KMF+ARK NSAKF EVD H++ILR+KEEQD+E
Sbjct: 898 KAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDRE 957
Query: 3098 MSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLF 3277
RHLFRF HMGMWTKLRPGIW FLE+AS L+E+HLYTMGNKLYATEMAKVLDP G LF
Sbjct: 958 KPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLF 1017
Query: 3278 AGRVISKGDDADTFDGDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYT 3457
AGRVIS+GDD D FDGDERVPKSKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYT
Sbjct: 1018 AGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYT 1077
Query: 3458 YFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILA 3637
YFP SRRQFGLLGPSLLEIDHDER EDGTLASSL VIERLH+ FFSH SL DVDVRNILA
Sbjct: 1078 YFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILA 1137
Query: 3638 AEQRKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 3760
AEQRKILAGCRIVFSR+FPVGEANPH+HPLWQTAEQFGAVC
Sbjct: 1138 AEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVC 1178
>ref|XP_004980548.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Setaria italica]
Length = 1074
Score = 739 bits (1907), Expect = 0.0
Identities = 449/980 (45%), Positives = 570/980 (58%), Gaps = 27/980 (2%)
Frame = +2
Query: 902 AETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQAVMAIQTTYSALNSVTMQKKD 1081
A SFE C RL FE+LKP++ S QA + I T + NS + +K+
Sbjct: 81 AARSFEGTCARLHTCFENLKPLYPENGSPMPILDPLVHQAFIGIDTLTTVANSYNLPRKE 140
Query: 1082 QNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVFEDNKKEKADLTNGPVVSLHGSN 1261
QNK +LL+LL HIKN+YS + TL+Q E+D+ V LVFED T+G S S+
Sbjct: 141 QNKTMLLKLLFHIKNRYSSILTLDQRDELDSRVRQLVFEDKDNVNDPSTSGSAPSGQVSS 200
Query: 1262 ----VLEKACLVPEALDLPKLVLPTRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFS 1429
A LP+L +P + SPLLDLHADY+E+SLPSPTR+N P F
Sbjct: 201 GRLPYESGAANSFSGSSLPRLEIPAKR-----ISPLLDLHADYDENSLPSPTRDNAPPFP 255
Query: 1430 IPKPIGLGMVLPVSSQPITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPS 1609
+PKPIG G V +P + ++P + D LKAVSSYQ K+G S+ +D LPS
Sbjct: 256 VPKPIGFGAFPMVPERPSFPERESGRNSIYPSLNDPLKAVSSYQQKYGQKSVFPSDDLPS 315
Query: 1610 PTPS-EDGGQGXXXXXXXXXXXXXCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHP-- 1780
PTPS +DG P+ + QM S+ + + S+IS P
Sbjct: 316 PTPSGDDGKSADKGGDIFGEISSFPAPKKTALPSTSQMPASQPNTT-SGSNISYAGGPPG 374
Query: 1781 ----VEQLNPMSKPALKPALKRRDPRLKFVNNEVKSISDEG-RVTEPDLLKSD-PVGVAT 1942
EQL ALK K RDPRL+F+N + +D RV DL + GV T
Sbjct: 375 YGKQAEQLAAGPNHALKATSKSRDPRLRFLNRDSAGATDANQRVNFSDLKDGNLGAGVPT 434
Query: 1943 NSKKHKT-DESVARDHMMKKQRHKLTTSREMETASGSGWSEAKNVIPQPSFKIQVNENFQ 2119
++KHK DE ++++K+ R G + +N++ Q+ N +
Sbjct: 435 INRKHKAVDEPQVDENVLKRFR--------------LGAGDPRNMLVPTGNPNQLMTNMR 480
Query: 2120 VDVRKSGTAAAVPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPS-LLKAV--NPTILLQ 2290
SG A P P S P+ + P +SLPS LLK + NPT+L+
Sbjct: 481 APPNSSG--ATTPFLHPTQS----------SAPQISAPPAVSLPSSLLKDIAGNPTVLMN 528
Query: 2291 LHQMEQQRIAAENQKKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGLNQPGISLI 2470
+MEQQ+++A ++ A+S+ +S+ + GTV S P K+ E+ +
Sbjct: 529 WIKMEQQKMSASEPQQVAMSSG----TISIG-IAGTVLPPGSAP-KTTEAAQVPSVRPQV 582
Query: 2471 PSQMASSSTQPDVARIRMKPRDPRRILHDNMVQKNDGVVYQQSKIDAAASDPQSSLVRLA 2650
Q ++Q D +RMKPRDPRRILH+++ QK D V +Q K + D Q + +
Sbjct: 583 LMQTPPLNSQNDTGILRMKPRDPRRILHNSIAQKTDAVGLEQHKSNGTKPDSQGTKDQTT 642
Query: 2651 APLQLTKNLANVLXXXXXXXXXXXXXXCNNQPVASQADQVIVEAASGELNDSETTSLLVS 2830
+ + ++ + +N +A+ A + AS L + L V
Sbjct: 643 SMVSQPALVSGIARPFTMSTKHVDPV--SNSQLAATALMAPTQQASSSLTRVDPR-LAVE 699
Query: 2831 EVGSEKGTR----------QSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAA 2980
+ G Q NPWGDVDHL DGY+D+QKA IQKER+RRI EQ+KMF+A
Sbjct: 700 QNGHNAYAANAPATPLEAVQPVNPWGDVDHLLDGYDDQQKALIQKERARRITEQHKMFSA 759
Query: 2981 RKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPG 3160
RK NSAKFIEVD HE+ILR+KEEQD+ M +RHL+RF HM MWTKLRPG
Sbjct: 760 RKLCLVLDLDHTLLNSAKFIEVDSVHEEILRKKEEQDRSMPERHLYRFHHMNMWTKLRPG 819
Query: 3161 IWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERVP 3340
IWNFL+KAS L+ELHLYTMGNKLYATEMAKVLDPTGTLFAGRVIS+GDD D FD DER+P
Sbjct: 820 IWNFLDKASKLFELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDERLP 879
Query: 3341 KSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDH 3520
KSKDLDGVLGMESAVVIIDDSVRVWPHN+ NLIVVERYTYFP SRRQFGL GPSLLEID
Sbjct: 880 KSKDLDGVLGMESAVVIIDDSVRVWPHNRHNLIVVERYTYFPCSRRQFGLPGPSLLEIDR 939
Query: 3521 DERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVG 3700
DERPEDGTLASSLAVIER+H NFFSH L + DVR IL+ EQ++ILAGC IVFSR+FPVG
Sbjct: 940 DERPEDGTLASSLAVIERIHHNFFSHPKLNEADVRTILSDEQKRILAGCHIVFSRVFPVG 999
Query: 3701 EANPHMHPLWQTAEQFGAVC 3760
+ PH+HPLWQTAEQFGAVC
Sbjct: 1000 DTKPHLHPLWQTAEQFGAVC 1019
>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
Length = 1184
Score = 738 bits (1905), Expect = 0.0
Identities = 497/1184 (41%), Positives = 646/1184 (54%), Gaps = 59/1184 (4%)
Frame = +2
Query: 386 DGETSDVDSSESLEEISAEDF-KQEGRAGR-------SRVWMGYPMS---------KNYG 514
D E ++ S S+EEIS EDF KQE R R +RVW + Y
Sbjct: 54 DVEEGEISDSASVEEISEEDFNKQEVRVLREAKPKADTRVWTMRDLQDLYKYHQACSGYT 113
Query: 515 PSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQXXXXXXX 694
P LYN AWAQAVQNKPL D+ +D G + DV ++D S+
Sbjct: 114 PRLYNLAWAQAVQNKPLN---------DIFVIIDDSG----DEMDVKMDDVSEKEEGELE 160
Query: 695 XXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKKESDGEELQDISEFDKRISLILE 874
V DE L D+ E E + KE E +R+ I E
Sbjct: 161 EGEIDLDSEPD-------VKDEGGVL--DVNEPEIDLKER---------ELVERVKSIQE 202
Query: 875 ELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGI---ESSDTXXXXXXQQAVMAIQTTY 1045
+L+++TV EAE SF VC RL+ + L+ +F ESS QQ + AI+
Sbjct: 203 DLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDALAQQLINAIRALN 262
Query: 1046 SALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL--------VFED 1201
S+ +K+ NK + RLL ++ S +F+++ +KE++ +++ L
Sbjct: 263 HVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSFLDTPAAQSSAEAS 322
Query: 1202 NKKEKADLTNGPVVSLHGSNVLEKACLVPEALDLPKLVLPTRSKNRVDFSPLLDLHADYN 1381
+K +T+G ++ S+V A + + R F PLLDLH D++
Sbjct: 323 DKVNDVQVTDGMNRNILDSSVESSGRAFASA---------KKFRGRFIFGPLLDLHKDHD 373
Query: 1382 EDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAKNGGE--DVMLHPYVTDALKAVSS 1555
EDSLPSPT + F + K S+ +TAK E D ++HPY TDALKAVS+
Sbjct: 374 EDSLPSPTGKAPQCFPVNK-----------SELVTAKVAHETQDSIMHPYETDALKAVST 422
Query: 1556 YQLKFGSNSILSTDRLPSPTPSEDGGQ------GXXXXXXXXXXXXXCNPRA-----VHA 1702
YQ KFG S L D+LPSPTPSE+ G G N A V +
Sbjct: 423 YQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIVSS 482
Query: 1703 ATQFQMVKSRSSAPCTNSSISNQSHPVEQLNPMSKPALKPALKRRDPRLKFVNNEVKSIS 1882
A Q +V+ P +++++ + + L+ + K RDPRL+ +++ S+
Sbjct: 483 APQMDIVQGLV-VPRNTGAVNSRFNSI----------LRASAKSRDPRLRLASSDAGSLD 531
Query: 1883 DEGRVTEP--DLLKSDPVGVATNSKKHKTDESVARDH-MMKKQRHKLTTSREMETASGSG 2053
R + K DP+G +S+K K+ E D + K+QR+ LT+
Sbjct: 532 LNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQRNGLTS----------- 580
Query: 2054 WSEAKNVIPQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLRSIPKSNPT 2233
P+ K++ T + KP + ++G +P +
Sbjct: 581 ----------PATKLE----------SKVTVTGIGCDKP-----YVTVNGNEHLPVVATS 615
Query: 2234 PTISLPSLLK--AVNPTILLQL-HQMEQQRIAAENQKKNAVSTSDSANVLSVNELPGTVA 2404
T SL SLLK AVNP + + + +++EQQ+ + + KN V S ++L G V
Sbjct: 616 TTASLQSLLKDIAVNPAVWMNIFNKVEQQK--SGDPAKNTVLPPTSNSIL------GVVP 667
Query: 2405 SINSTPLKSKESGLNQPGISLIPSQMASSSTQPDVARIRMKPRDPRRILHDNMVQKNDGV 2584
+ PLK G G +P Q + Q + ++RMKPRDPRRILH N Q++
Sbjct: 668 PASVAPLKPSALGQKPAGALQVP-QTGPMNPQDESGKVRMKPRDPRRILHANSFQRSGSS 726
Query: 2585 VYQQSKIDAAASDPQSSLVRLAA--------PLQLTKNLANVLXXXXXXXXXXXXXX--- 2731
+Q K +A + Q+ + + Q TKNL N+
Sbjct: 727 GSEQFKTNAQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNIADLMSASQASSMTPTFPQ 786
Query: 2732 -CNNQPVASQADQVIVEAASGELNDSETTSLLVSEVGSEKGTRQSANPWGDVDHLFDGYN 2908
++Q V D++ V+A + D T + S+ S G QS N WGDV+HLFDGY+
Sbjct: 787 ILSSQSVQVNTDRMDVKATVSDSGDQLTAN--GSKPESAAGPPQSKNTWGDVEHLFDGYD 844
Query: 2909 DEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQ 3088
D+QKA IQ+ER+RRI EQ KMF+ARK NSAKF+EVD H++ILR+KEEQ
Sbjct: 845 DQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQ 904
Query: 3089 DKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTG 3268
D+E SQRHLFRF HMGMWTKLRPGIWNFLEKAS LYELHLYTMGNKLYATEMAKVLDP G
Sbjct: 905 DREKSQRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKG 964
Query: 3269 TLFAGRVISKGDDADTFDGDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVE 3448
LFAGRVISKGDD D DGDERVPKSKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVE
Sbjct: 965 VLFAGRVISKGDDGDVLDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVE 1024
Query: 3449 RYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRN 3628
RYTYFP SRRQFGL GPSLLEIDHDERPEDGTLASSLAVIER+HQ+FFS+ +L +VDVRN
Sbjct: 1025 RYTYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRN 1084
Query: 3629 ILAAEQRKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGAVC 3760
ILA+EQRKILAGCRIVFSR+FPVGEANPH+HPLWQTAE FGAVC
Sbjct: 1085 ILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAESFGAVC 1128
>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum tuberosum]
Length = 1218
Score = 734 bits (1895), Expect = 0.0
Identities = 496/1227 (40%), Positives = 652/1227 (53%), Gaps = 99/1227 (8%)
Frame = +2
Query: 377 RALDGETSDVDSSESLEEISAEDFKQE------------------GRAGRSRVWM----- 487
R D E ++ S S+EEIS + F ++ +RVW
Sbjct: 6 RVEDVEEGEISDSASVEEISEDAFNRQDPPTTTKIKIASNENQNQNSTTTTRVWTMRDAY 65
Query: 488 GYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAY-DVIVED 664
YP+S++Y LYN AWAQAVQNKPL +L M++ + +A + + DV V+D
Sbjct: 66 KYPISRDYARGLYNLAWAQAVQNKPLD-ELFVMTSDNSNQCANANANVESKVIIDVDVDD 124
Query: 665 SSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKKESDGEELQDISE 844
++ E E E+ E D + +
Sbjct: 125 DAKE-------------------------------------EGELEEGEIDLDAADLVLN 147
Query: 845 FDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQAV 1024
F K + + E+L ++T++E SF VC +L+ S L + + +D Q +
Sbjct: 148 FGKEANFVREQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQDKNDILI----QLFM 203
Query: 1025 MAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL----V 1192
A++T S S+ +K QN +L RLL H K Q L + EQ+KE+D ++ S+ V
Sbjct: 204 TALRTINSVFYSMNQDQKQQNTDILSRLLFHAKTQLPALLSSEQLKEVDAVILSINQSAV 263
Query: 1193 FEDNKKEKADLTNG-PVVSLHGSNVLEKAC-------LVPEALDLPKLVLPTRSKNRVDF 1348
F + + D NG VV L V K+ DL + + +
Sbjct: 264 FSNTQDN--DKVNGIKVVELLDKKVSHKSSENANQDFTAVNKYDLGAVSIKSSGLKEQSV 321
Query: 1349 S------------------PLLDLHADYNEDSLPSPTRENLPKFSIPKPIGL-GMV---L 1462
S PLLDLH D++ED+LPSPTRE P+F + K GMV L
Sbjct: 322 SFESVKPGLANSKAKGLSIPLLDLHKDHDEDTLPSPTREIGPQFPVAKATQAHGMVKLDL 381
Query: 1463 PVSSQPITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGX 1642
P+ + + N +LHPY TDALKAVSSYQ KFG +S+ ++ LPSPTPSE+G G
Sbjct: 382 PIFAGSLEKGNS----LLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEGDSGK 437
Query: 1643 XXXXXXXXXXXXCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHPVEQLNPMS---KPA 1813
+ A H SS P TN +P+S P+
Sbjct: 438 GDIGGEVTSLDVVH-NASHLNESSMGQPILSSVPQTNILDGQGLGTARTADPLSFLPNPS 496
Query: 1814 LKPAL-KRRDPRLKFVNNE-VKSISDEGRVTEPDL-LKSDPVGVATNSKKHKT-DESVAR 1981
L+ + K RDPRL+ ++ V +++ + PD+ LK + SKK KT D V
Sbjct: 497 LRSSTAKSRDPRLRLATSDAVAQNTNKNILPIPDIDLKLEASLEMIGSKKQKTVDLPVFG 556
Query: 1982 DHMMKKQRHKLTTS---REMETASGSG-WSEAKNVIPQPSFKIQ-VNENFQVDVRK---- 2134
+ K+QR + T S ++ ++G+G W E + P ++ D+RK
Sbjct: 557 APLPKRQRSEQTDSIIVSDVRPSTGNGGWLEDRGTAGLPITSSNCATDSSDNDIRKLEQV 616
Query: 2135 SGTAAAVPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQLHQMEQ 2308
+ T A +P NF P + + + +L SLLK A+NP+I + + +MEQ
Sbjct: 617 TATIATIPSVIVNAAENF---------PVTGISTSTTLHSLLKDIAINPSIWMNIIKMEQ 667
Query: 2309 QRIAAENQKKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGLNQPGISLIPSQMAS 2488
Q+ +A+ + S S ++L G V S ++ +S G GI P+ AS
Sbjct: 668 QK-SADASRTTTAQASSSKSIL------GAVPSTDAIAPRSSAIGQRSVGILQTPTHTAS 720
Query: 2489 SSTQPDVARIRMKPRDPRRILHDNMVQKNDGVVYQQSKIDAAAS---------------- 2620
+ +VA +RMKPRDPRR+LH+ V K V Q K A +
Sbjct: 721 AD---EVAIVRMKPRDPRRVLHNTAVLKGGNVGSDQCKTGVAGTHATISNLGFQSQEDQL 777
Query: 2621 DPQSSLVRLAAP----LQLTKNLANVLXXXXXXXXXXXXXXCNNQPVASQADQVIVEAAS 2788
D +S++ P Q TKNL N+ Q Q+ Q E
Sbjct: 778 DRKSAVTLSTTPPDIARQFTKNLKNIADMISVSPSTSLSAASQTQTQCLQSHQSRSEGKE 837
Query: 2789 GELNDSETTSLLVSEVGSEKGTRQSANP---WGDVDHLFDGYNDEQKATIQKERSRRIAE 2959
SE + + + SEKG+ S P WGDV+HLF+GY+D+Q+A IQ+ER+RR+ E
Sbjct: 838 AVSEPSERVN--DAGLASEKGSPGSLQPQISWGDVEHLFEGYSDQQRADIQRERARRLEE 895
Query: 2960 QNKMFAARKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGM 3139
Q KMF+ RK NSAKF+E+D HE+ILR+KEEQD+E RHLFRF HMGM
Sbjct: 896 QKKMFSVRKLCLVLDLDHTLLNSAKFVEIDPVHEEILRKKEEQDREKPCRHLFRFPHMGM 955
Query: 3140 WTKLRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTF 3319
WTKLRPGIWNFLEKASNL+ELHLYTMGNKLYATEMAK+LDP G LFAGRVIS+GDD D F
Sbjct: 956 WTKLRPGIWNFLEKASNLFELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPF 1015
Query: 3320 DGDERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGP 3499
DGDERVPKSKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFP SRRQFGL GP
Sbjct: 1016 DGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGP 1075
Query: 3500 SLLEIDHDERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVF 3679
SLLEIDHDERPEDGTLAS L VI+R+HQNFF+H S+ + DVRNILA EQ+KILAGCRIVF
Sbjct: 1076 SLLEIDHDERPEDGTLASCLGVIQRIHQNFFAHRSIDEADVRNILATEQKKILAGCRIVF 1135
Query: 3680 SRIFPVGEANPHMHPLWQTAEQFGAVC 3760
SR+FPVGEANPH+HPLWQTAEQFGAVC
Sbjct: 1136 SRVFPVGEANPHLHPLWQTAEQFGAVC 1162
>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
3 [Populus trichocarpa]
Length = 1190
Score = 726 bits (1873), Expect = 0.0
Identities = 494/1202 (41%), Positives = 649/1202 (53%), Gaps = 68/1202 (5%)
Frame = +2
Query: 359 ERPRGGRAL---DGETSDVDSSESLEEISAEDF-KQE---------GRAGRSRVWM---- 487
E GGR+ D E ++ + S+EEIS EDF KQE +VW
Sbjct: 5 ETAGGGRSSGIEDVEEGEISDTASVEEISEEDFNKQEVVIVKETPSSNNSSQKVWTVRDL 64
Query: 488 -GYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVED 664
Y + Y LYN AWA+AVQNKPL +LT +D G + + +E
Sbjct: 65 YKYQVGGGYMSGLYNLAWARAVQNKPLN---------ELTVVIDDSGDEMDVVKVIDIEK 115
Query: 665 SSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKKESDGEELQDISE 844
E + D+ ++EP +S+G D+
Sbjct: 116 EE----------------------------GELEEGEIDL-DSEPVVVQSEGMVSVDV-- 144
Query: 845 FDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQAV 1024
+ R+ I ++L++++V E E SFEAVCL+L K E LK + G ++S Q
Sbjct: 145 -ENRVKSIRKDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNSFPSKDGLVQLLF 203
Query: 1025 MAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEI------DTLVNS 1186
MAI+ S S+ + K+QNK + R + + Y F+ Q KE+ D+L +
Sbjct: 204 MAIRVVNSVFCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEVLNENHNDSLAKT 263
Query: 1187 LVFE-DNKKEKADLTNGPVVSLHGSNVLEKACLVPEALDLPKLVLPTRSKNRVDFSPLLD 1363
++ EK P N K+ P+ +P K+R PLLD
Sbjct: 264 AGYDLTTMSEKL-----PAAETFVQNKPNKSIEAPKPPGVPSF------KSRGVLLPLLD 312
Query: 1364 LHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAKNG-GEDVMLHPYVTDAL 1540
L ++EDSLPSPT+E P F + + + +G + S P+ E+ +HPY TDAL
Sbjct: 313 LKKYHDEDSLPSPTQETTP-FPVQRLLAIGDGMVSSGLPVPKVTPVAEEPRMHPYETDAL 371
Query: 1541 KAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXXC-NPRAVHAATQFQ 1717
KAVSSYQ KF NS T+ LPSPTPSE+ G G N R V+ Q
Sbjct: 372 KAVSSYQQKFNRNSFF-TNELPSPTPSEESGNGDGDTAGEVSSSSTVVNYRTVNPPVSDQ 430
Query: 1718 MVKSRSSAPCT------NSSISNQSHPVEQLNPMSK---PALKPALKRRDPRLKFVNNEV 1870
S P +SS P P+S +K + K RDPRL++VN +
Sbjct: 431 KNAPPSPPPLPPPPPHPDSSNIRGVVPTRNSAPVSSGPSSTIKASAKSRDPRLRYVNIDA 490
Query: 1871 KSISDEGRVTEP--DLLKSDPVGVATNSKKHKTDESVARDHMMKKQRHKLTTS---REME 2035
++ R +L + +P G SKKHK +E V D +K+QR+ R++E
Sbjct: 491 CALDHNQRALPMVNNLPRVEPAGAIVGSKKHKIEEDVLDDPSLKRQRNSFDNYGAVRDIE 550
Query: 2036 TASGSG-WSEAKNVI-PQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLR 2209
+ +G+G W E ++ PQ K Q EN V+ SG A + P ++G
Sbjct: 551 SMTGTGGWLEDTDMAEPQTVNKNQWAENSNVN--GSGNA-----QSPFM--GISNITGSE 601
Query: 2210 SIPKSNPTPTISLPSLLK--AVNPTILLQLHQM-EQQRIAAENQKKNAVSTSDSANVLSV 2380
++ T T SLP LLK AVNPT+L+ + +M +QQR+A + Q+ + +++
Sbjct: 602 QAQVTS-TATTSLPDLLKDIAVNPTMLINILKMGQQQRLALDGQQTLSDPAKSTSHPPIS 660
Query: 2381 NELPGTVASINSTPLKSKESGL-NQPGISLIPSQMASSSTQPDVARIRMKPRDPRRILHD 2557
N + G + ++N S+ SG+ +P + +PSQ+A+S + +IRMKPRDPRR LH+
Sbjct: 661 NTVLGAIPTVNVA--SSQPSGIFPRPAGTPVPSQIATSD---ESGKIRMKPRDPRRFLHN 715
Query: 2558 NMVQKNDGVVYQQSKI-----------DAAASDPQSSLVRLAAPLQ------LTKNLANV 2686
N +Q+ + +Q K D Q L L + TK+L N+
Sbjct: 716 NSLQRAGSMGSEQFKTTTLTPTTQGTKDDQNVQKQEGLAELKPTVPPDISFPFTKSLENI 775
Query: 2687 LXXXXXXXXXXXXXXCNNQPVASQADQVIVEAASGE----LNDSETTSLLVSEVGSEKGT 2854
+ Q VASQ Q E G+ ++D +T EV + +
Sbjct: 776 ADILSVSQASTTPPFIS-QNVASQPMQTKSERVDGKTGISISDQKTGPASSPEVVA--AS 832
Query: 2855 RQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXXXXXXXXNSAK 3034
S N W DV+HLF+GY+D+QKA IQ+ER+RR+ EQ KMFAARK NSAK
Sbjct: 833 SHSQNTWKDVEHLFEGYDDQQKAAIQRERARRLEEQKKMFAARKLCLVLDLDHTLLNSAK 892
Query: 3035 FIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKASNLYELHLYT 3214
I H++ILR+KEEQD+E RH+FR HMGMWTKLRPGIWNFLEKAS L+ELHLYT
Sbjct: 893 AILSSSLHDEILRKKEEQDREKPYRHIFRIPHMGMWTKLRPGIWNFLEKASKLFELHLYT 952
Query: 3215 MGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERVPKSKDLDGVLGMESAVVII 3394
MGNKLYATEMAKVLDP G LFAGRVIS+GDD D FDGDERVPKSKDL+GVLGMES VVII
Sbjct: 953 MGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESGVVII 1012
Query: 3395 DDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIER 3574
DDSVRVWPHNKLNLIVVERY YFP SRRQFGL GPSLLEIDHDERPEDGTLA S AVIE+
Sbjct: 1013 DDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSFAVIEK 1072
Query: 3575 LHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGEANPHMHPLWQTAEQFGA 3754
+HQNFF+H SL + DVRNILA+EQRKIL GCRI+FSR+FPVGE NPH+HPLWQ AEQFGA
Sbjct: 1073 IHQNFFTHRSLDEADVRNILASEQRKILGGCRILFSRVFPVGEVNPHLHPLWQMAEQFGA 1132
Query: 3755 VC 3760
VC
Sbjct: 1133 VC 1134
>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum lycopersicum]
Length = 1211
Score = 722 bits (1863), Expect = 0.0
Identities = 488/1221 (39%), Positives = 644/1221 (52%), Gaps = 93/1221 (7%)
Frame = +2
Query: 377 RALDGETSDVDSSESLEEISAEDFKQEGRAGRS---------------------RVWM-- 487
R D E ++ S S+EEIS + F ++ S RVW
Sbjct: 6 RVEDAEEGEISDSASVEEISEDAFNRQDPPTTSTTSKIKIASNENQNQNSTTATRVWTMR 65
Query: 488 ---GYPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIV 658
YP+S++Y LYN AWAQAVQNKPL +L M++ + + + K DV V
Sbjct: 66 DVYKYPISRDYARGLYNLAWAQAVQNKPLD-ELFVMTSDNSNQCANGESKV---IIDVDV 121
Query: 659 EDSSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKKESDGEELQDI 838
+D ++ E E E+ E D + +
Sbjct: 122 DDDAKE-------------------------------------EGELEEGEIDLDSADLV 144
Query: 839 SEFDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQ 1018
F K + I E+L ++T++E SF VC +L+ S L + + +D Q
Sbjct: 145 VNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELALSQDKNDILI----QL 200
Query: 1019 AVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSL--- 1189
+ A++T S S+ +K QN +L RLL + K Q L + EQ+KE+D L+ S+
Sbjct: 201 FMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKELDALILSINHS 260
Query: 1190 VFEDNKKEKADLTNGPVVSL------HGSN-----------------VLEKACLVPEALD 1300
+ N ++ + VV L H S+ V K+ + E
Sbjct: 261 LVSSNTQDNDTVNGINVVQLLDMKDSHKSSENANQDFTSVNKYDLGDVSIKSSGLKEQSV 320
Query: 1301 LPKLVLP--TRSKNRVDFSPLLDLHADYNEDSLPSPTRENLPKFSIPKPIGLGMV-LPVS 1471
+ V P SK + PLLDLH D++ED+LPSPTR+ P+F + G+ + LP+
Sbjct: 321 SSESVKPGLDNSKAKGLSFPLLDLHKDHDEDTLPSPTRQIGPQFPATQTHGMVKLDLPIF 380
Query: 1472 SQPITAKNGGEDVMLHPYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXX 1651
+ N +LHPY TDALKAVSSYQ KFG +S+ ++ LPSPTPSE+ G
Sbjct: 381 PASLDKGNS----LLHPYETDALKAVSSYQQKFGRSSLFVSENLPSPTPSEEDDSGKGDT 436
Query: 1652 XXXXXXXXXCNPRAVHAATQFQMVKSRSSAPCTNSSISNQSHPVEQLNPMS---KPALKP 1822
+ A H SS P TN +P+S P+L+
Sbjct: 437 GGEVTSFDVVH-NASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFLPNPSLRS 495
Query: 1823 AL-KRRDPRLKFVNNEVKSISDEGRVTEPDLLKSDPVGVATNSKKHKTDESVARDHMMKK 1999
+ K RDPRL+ ++ + + + + DL + + + K+ D S + K+
Sbjct: 496 STAKSRDPRLRLATSDTVAQNTILPIPDIDLKLEASLEMIVSKKQKTVDLSAFDAPLPKR 555
Query: 2000 QRHKLTTS---REMETASGSG-WSEAKNVIPQPSFKIQ-VNENFQVDVRK----SGTAAA 2152
QR + T S ++ + G+G W E + P N D+RK + T A
Sbjct: 556 QRSEQTDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSDNDIRKLEQVTATIAT 615
Query: 2153 VPDKKPIFDNNFDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQLHQMEQQRIAAE 2326
+P NF P + + + +L SLLK A+NP+I + + + EQQ+ +A+
Sbjct: 616 IPSVIVNAAENF---------PVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQQK-SAD 665
Query: 2327 NQKKNAVSTSDSANVLSVNELPGTVASINSTPLKSKESGLNQPGISLIPSQMASSSTQPD 2506
+ N S S ++L +P TVA +S G GI P+ AS+ +
Sbjct: 666 ASRTNTAQASSSKSILGA--VPSTVA----VAPRSSAIGQRSVGILQTPTHTASAD---E 716
Query: 2507 VARIRMKPRDPRRILHDNMVQKNDGVVYQQSKIDAAAS----------------DPQSSL 2638
VA +RMKPRDPRR+LH V K V Q K A + D +S++
Sbjct: 717 VAIVRMKPRDPRRVLHSTAVLKGGSVGLDQCKTGVAGTHATISNLSFQSQEDQLDRKSAV 776
Query: 2639 VRLAAP----LQLTKNLANVLXXXXXXXXXXXXXXCNNQPVASQADQVIVEAASGELNDS 2806
P Q TKNL N+ Q + QA Q E S
Sbjct: 777 TLSTTPPDIACQFTKNLKNIADMISVSPSTSPSVASQTQTLCIQAYQSRSEVKGAVSEPS 836
Query: 2807 ETTSLLVSEVGSEKGTRQSANP---WGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFA 2977
E + + + SEKG+ S P WGDV+HLF+GY+D+Q+A IQ+ER+RR+ EQ KMF+
Sbjct: 837 EWVN--DAGLASEKGSPGSLQPQISWGDVEHLFEGYSDQQRADIQRERTRRLEEQKKMFS 894
Query: 2978 ARKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRP 3157
RK NSAKF+E+D HE+ILR+KEEQD+E RHLFRF HMGMWTKLRP
Sbjct: 895 VRKLCLVLDLDHTLLNSAKFVEIDPVHEEILRKKEEQDREKPYRHLFRFPHMGMWTKLRP 954
Query: 3158 GIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGDERV 3337
GIWNFLEKASNL+ELHLYTMGNKLYATEMAK+LDP G LFAGRVIS+GDD D FDGDERV
Sbjct: 955 GIWNFLEKASNLFELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDERV 1014
Query: 3338 PKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEID 3517
PKSKDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFP SRRQFGL GPSLLEID
Sbjct: 1015 PKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEID 1074
Query: 3518 HDERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPV 3697
HDERPEDGTLAS L VI+R+HQNFF+H S+ + DVRNILA EQ+KILAGCRIVFSR+FPV
Sbjct: 1075 HDERPEDGTLASCLGVIQRIHQNFFTHRSIDEADVRNILATEQKKILAGCRIVFSRVFPV 1134
Query: 3698 GEANPHMHPLWQTAEQFGAVC 3760
GEA+PH+HPLWQTAEQFGAVC
Sbjct: 1135 GEASPHLHPLWQTAEQFGAVC 1155
>gb|EMS65645.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Triticum
urartu]
Length = 1119
Score = 718 bits (1854), Expect = 0.0
Identities = 478/1159 (41%), Positives = 631/1159 (54%), Gaps = 71/1159 (6%)
Frame = +2
Query: 497 MSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSAGDLTDNVDAKGKPQEEAYDVIVEDSSQX 676
MS++Y P+ ++FAWAQAVQNKPL P A D + EE + +E+
Sbjct: 1 MSRSYAPAFHSFAWAQAVQNKPL----VPRPAADEDEVEHLVDTSDEEKEEGEIEEGEAV 56
Query: 677 XXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPE---KKESDGEELQDISEF 847
ET L SD + ++ E D +F
Sbjct: 57 QSTSPPIKQP-----------------ETIDLDSDAQDKSESVDMEQTRLAVEAADELDF 99
Query: 848 DKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXXXXXXQQAVM 1027
D+R+ ILEEL+ +++EEAE SFEA C RLR FE LKP+F S QQA +
Sbjct: 100 DQRVGSILEELERLSIEEAEKSFEASCARLRSCFESLKPLFPESGSPMPMLDALVQQAFV 159
Query: 1028 AIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLVNSLVF---E 1198
I T + NS M K++QNK +LL+LL HIKN+YS + L Q E+D+ V LVF E
Sbjct: 160 GIDTITTVANSYAMPKREQNKNMLLKLLFHIKNRYSDMLALNQRDELDSRVRQLVFVDGE 219
Query: 1199 DNKKEKADLTNGPVVSLHGSNVLEK------ACLVPEALDLPKLVLPTRSKNRVDFSPLL 1360
DN VV G ++ A P P +P + NR+ SPLL
Sbjct: 220 DNAGSNCSTKTVNVVVPSGQVPSDRLPVESGAANPPRGSSFPSWEIP--ANNRI-VSPLL 276
Query: 1361 DLHADYNEDSLPSPTRENLPKFSIPKPIGLGMVLPVSSQPITAKN-GGEDVMLHPYVTDA 1537
DLHADY+E+SLPSPTR + P FS+PKPIG G+ + +A+ + L+P V DA
Sbjct: 277 DLHADYDENSLPSPTRVSAPPFSVPKPIGFGVFPMAPDRYFSAERIDPSKIFLYPCVNDA 336
Query: 1538 LKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXXCNPRAVHAATQFQ 1717
LK VSSY+ K+G S ++D LPSPTPS+DG + + A
Sbjct: 337 LKDVSSYRQKYGPTSTFASDDLPSPTPSDDGDKSGDKEGDIFGEVSSFSASNKSAPPSGN 396
Query: 1718 MVKSRSSAPCTNSSISNQSHP------VEQLNPMSKPALKPALKRRDPRLKFVNNEVKSI 1879
++ + + +S+ S P +EQ ALKP+ K RDPRL+F+N +
Sbjct: 397 LMPASRPSAVISSNDSFAGGPPGYAKQIEQSVSGPSHALKPSAKSRDPRLRFLNRDSGGT 456
Query: 1880 SDEG---RVTEPDLLKSDPVG--VATNSKKHK-TDESVARDHMMKKQRHKLTTSREMETA 2041
+D + EP+ K +G V+ NS+KHK TD+ + + ++K+ R + R++
Sbjct: 457 ADANIHVNLAEPNASKDGTLGGVVSDNSRKHKATDQPLMDETVLKRARESTGSPRDILVP 516
Query: 2042 SGSGWSEAKNVIPQPSFKIQVNENFQVDVRKS------------GTAAAVPDKKPIFDNN 2185
G + N+ ++Q N++ ++ + + +++PD
Sbjct: 517 PGR---DGSNISSYSGDRVQSNKHTGLETKTARNPSIRTSSQLISNVSSIPDSTGTL--- 570
Query: 2186 FDELSGLRSIPKSNPTPTISLPSLLK--AVNPTILLQLHQME-QQRIAAENQKKNAVSTS 2356
+ S S+P+++ P +SLP++LK AVNPT+L+ QME Q+R A+E Q + + +S
Sbjct: 571 --QASQPNSVPQTSAAPIVSLPAVLKDIAVNPTVLMHWIQMEHQKRSASEPQPASGIISS 628
Query: 2357 DSANVLSVNEL--PGTVASINSTPLKSKESGLNQPGISLIPSQMASSSTQPDVARIRMKP 2530
N ++ + PG LK+ E SQ AS ++Q D IRMK
Sbjct: 629 GMINNVTAGMVIPPGNA-------LKTAEVAHIPSYRPQATSQTASVNSQNDPGVIRMKA 681
Query: 2531 RDPRRILHDNMVQKNDGVVYQQSKIDAAA----SDPQSSLV---RLAAPLQLTK------ 2671
RDPRR+LH+N QKND + Q+K + A D + +L+ +LA LQ T
Sbjct: 682 RDPRRVLHNNTSQKNDTLNSDQAKSNGIALPAFQDSKDNLINRQQLAEQLQTTVLPSQPV 741
Query: 2672 NLANVLXXXXXXXXXXXXXXCNNQPVAS-----QADQVIVEAASGEL----NDSETTSLL 2824
+L+++ N+Q AS Q V V A + NDS +
Sbjct: 742 SLSSIARQSTMSASKVDPVS-NSQLAASSLIAPQESLVSVNRADPRVAAGQNDSNNAA-- 798
Query: 2825 VSEVGSEKGTRQSANPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNKMFAARKXXXXXX 3004
+ GTR AN WGD+D L +GY+D+QKA IQKER+RRI EQ+ MF++RK
Sbjct: 799 ---PATTLGTRPPANQWGDLDDLLNGYDDQQKALIQKERARRIMEQHTMFSSRKLCLVLD 855
Query: 3005 XXXXXXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTKLRPGIWNFLEKA 3184
NSAKFIEVD HE+ILR+KEEQD+E S+RHLFRF HM MWTKLRPGIWNFLEKA
Sbjct: 856 LDHTLLNSAKFIEVDPIHEEILRKKEEQDRERSERHLFRFHHMQMWTKLRPGIWNFLEKA 915
Query: 3185 SNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRV-------ISKGDDADTFDGDERVPK 3343
S LYELHLYTMGNKLYATEMAKVLDP+GTLFAGRV IS+G D DTFD D+RVPK
Sbjct: 916 SKLYELHLYTMGNKLYATEMAKVLDPSGTLFAGRVISRGGDGISRGGDGDTFDSDDRVPK 975
Query: 3344 SKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHD 3523
SKDLDGVLGMESAVVIIDDSVRVWPHNK N+IVVER+ SL I D
Sbjct: 976 SKDLDGVLGMESAVVIIDDSVRVWPHNKNNMIVVERHV--------------SLSNIYSD 1021
Query: 3524 ERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRIFPVGE 3703
VI R+HQNFFSH +L D DVR+IL++EQR+ILAGCRIVFSRIFPVGE
Sbjct: 1022 -------------VIGRIHQNFFSHPNLNDADVRSILSSEQRRILAGCRIVFSRIFPVGE 1068
Query: 3704 ANPHMHPLWQTAEQFGAVC 3760
ANPH+HPLWQTAEQFGAVC
Sbjct: 1069 ANPHLHPLWQTAEQFGAVC 1087
>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
phosphatase, putative [Ricinus communis]
Length = 1195
Score = 714 bits (1842), Expect = 0.0
Identities = 485/1224 (39%), Positives = 646/1224 (52%), Gaps = 99/1224 (8%)
Frame = +2
Query: 386 DGETSDVDSSESLEEISAEDF--------------------KQEGRAGRSRVWM-----G 490
D E ++ + S+EEIS EDF K++G G RVW
Sbjct: 14 DVEEGEISDTASIEEISEEDFNKQDVVVVKPPSSNNETTKQKEQGN-GNGRVWTISDLYR 72
Query: 491 YPMSKNYGPSLYNFAWAQAVQNKPLGLDLKPMSA--GDLTDNVDAKGKPQEEAYDVIVED 664
Y M + LYN AWAQAVQ+KP G KP++ D+ + +D K +
Sbjct: 73 YQMVGGHVSGLYNLAWAQAVQSKP-GKSNKPLNELFADVVEELDESSKRSSPS------- 124
Query: 665 SSQXXXXXXXXXXXXXXXXXXXXXXXXXVVDETTQLSSDIPENEPEKK--------ESDG 820
++S+ + + EKK + +G
Sbjct: 125 ------------------------------SSAASVNSNNKDGDEEKKKVVEKVVIDDNG 154
Query: 821 EELQDISEFDKRISLILEELDTITVEEAETSFEAVCLRLRKSFEDLKPMFTGIESSDTXX 1000
+E+ D + +K + ++ +E + EE E + + + L G+E
Sbjct: 155 DEMMDDNNRNKIVDVVEKEEGEL--EEGEIDLDMEPGEKANNGDVLNMNIDGLEVESGEK 212
Query: 1001 XXXXQQAVMAIQTTYSALNSVTMQKKDQNKQLLLRLLIHIKNQYSVLFTLEQVKEIDTLV 1180
+ + + AL SVT++ ++ + V F+ KE + L+
Sbjct: 213 GFEKK-----MNSIRDALESVTIE-----------FVLACTDSSGVSFSSFSEKEKEPLI 256
Query: 1181 NSLVFEDNKKEKADLTNGPVVSLHGSNVLEKACLVPEALDL----PKLVLPTRSKNRVDF 1348
+++V NKK+ + N L V +L PK + + K+R
Sbjct: 257 STVV---NKKDNDVNGKSSGHDMSAVNKLPTDSFVNNKANLSIEGPKTGVSS-FKSRAAL 312
Query: 1349 SPLLDLHADYNEDSLPSPTREN---LPKFSIPKPIGLGMVLPVSSQPITAKNGGEDVMLH 1519
PLLDLH D++ DSLPSPTRE+ LP + + P MVL + +H
Sbjct: 313 LPLLDLHKDHDADSLPSPTRESALPLPAYRVLTP---KMVLDTGNS-----------RMH 358
Query: 1520 PYVTDALKAVSSYQLKFGSNSILSTDRLPSPTPSEDGGQGXXXXXXXXXXXXXCNP-RAV 1696
PY TDALKAVSSYQ KF +S TDRLPSPTPSE+ G G + R
Sbjct: 359 PYETDALKAVSSYQQKFSKSSFALTDRLPSPTPSEESGNGDGDTGGEVSSSLSVSSFRPA 418
Query: 1697 HAATQFQMVKSRSSAPCTNSSISNQSHPVEQLNPMSKPAL--KPALKRRDPRLKFVNNEV 1870
+ T Q S S SS+ + S P+L K + K RDPRL+FVN++
Sbjct: 419 NPLTSGQSNASISLPRMDGSSLPGVISIKSAVRASSAPSLTVKASAKSRDPRLRFVNSDS 478
Query: 1871 KSISDEGR-VTEPDLLKSDPVGVATNSKKHK-TDESVARDHMMKKQRHKLTTS---REME 2035
++ R V + LK +P+G N K+ K D+ + H +K+Q++ L S R+++
Sbjct: 479 NALDQNHRAVPVVNTLKVEPIGGTMNKKRQKIVDDPIPDGHSLKRQKNALENSGVVRDVK 538
Query: 2036 TASGSG-WSEAKNVI-PQPSFKIQVNENFQVDVRKSGTAAAVPDKKPIFDNNFDELSGLR 2209
T GSG W E +++ PQ K Q+ +N + D R+ I N +SG
Sbjct: 539 TMVGSGGWLEDTDMVGPQTMNKNQLVDNAESDPRRKDGGGVCTSSSCISSVN---ISGTE 595
Query: 2210 SIPKSNPT------------PTISLPSLLK--AVNPTILLQLHQM-EQQRIAAENQKKNA 2344
IP + + T ++P LLK AVNPT+L+ + +M +QQR+A E Q+K
Sbjct: 596 QIPVTGTSVPIGGELVPVKGSTAAIPDLLKNIAVNPTMLINILKMGQQQRLALEAQQKPV 655
Query: 2345 VSTSDSANVLSVNELPGTVASINSTPLKSKESGL--NQPGISLIPSQMASSSTQPDVARI 2518
+ L+ N + GTV + + SG+ G + Q+ T D+ +I
Sbjct: 656 DPAKSTTYPLNSNSMLGTVPVVGAA-----HSGILPRPAGTVQVSPQLG---TADDLGKI 707
Query: 2519 RMKPRDPRRILHDNMVQKNDGV-------------VYQQSKIDAAASDPQSSLVRLAAPL 2659
RMKPRDPRR+LH+N +Q+N + + Q++K + + + + PL
Sbjct: 708 RMKPRDPRRVLHNNALQRNGSMGSEHLKTNLTSIPINQETKDNQNLQKQEGQVEKKPVPL 767
Query: 2660 Q----------LTKNLANVLXXXXXXXXXXXXXXCNNQPVASQADQVIVEAASGELNDSE 2809
Q TKNL N+ +QP+ Q AS + +
Sbjct: 768 QSLALPDISMPFTKNLKNIADIVSVSHAS------TSQPLVPQ------NPASQPMRTTI 815
Query: 2810 TTSLLVSEVGSEKGTRQSA-------NPWGDVDHLFDGYNDEQKATIQKERSRRIAEQNK 2968
++S +GS G +A N WGDV+HLF+GYND+QKA IQ+ER+RRI EQ K
Sbjct: 816 SSSDQFLGIGSAPGAAAAAAAGPRTQNAWGDVEHLFEGYNDQQKAAIQRERARRIEEQKK 875
Query: 2969 MFAARKXXXXXXXXXXXXNSAKFIEVDLAHEDILRRKEEQDKEMSQRHLFRFQHMGMWTK 3148
+F+ARK NSAKF+EVD H++ILR+KEEQD+E + RHLFRF HMGMWTK
Sbjct: 876 LFSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKAHRHLFRFPHMGMWTK 935
Query: 3149 LRPGIWNFLEKASNLYELHLYTMGNKLYATEMAKVLDPTGTLFAGRVISKGDDADTFDGD 3328
LRPGIWNFLEKAS LYELHLYTMGNKLYATEMAKVLDPTG LF GRVIS+GDD + FDGD
Sbjct: 936 LRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPTGVLFNGRVISRGDDGEPFDGD 995
Query: 3329 ERVPKSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLL 3508
ER+PKSKDL+GVLGMES VVI+DDSVRVWPHNKLNLIVVERY YFP SRRQFGL GPSLL
Sbjct: 996 ERIPKSKDLEGVLGMESGVVIMDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLL 1055
Query: 3509 EIDHDERPEDGTLASSLAVIERLHQNFFSHNSLKDVDVRNILAAEQRKILAGCRIVFSRI 3688
EIDHDERPEDGTLA SLAVIER+HQNFF+H SL + DVRNILA+EQRKILAGCRIVFSR+
Sbjct: 1056 EIDHDERPEDGTLACSLAVIERIHQNFFTHPSLDEADVRNILASEQRKILAGCRIVFSRV 1115
Query: 3689 FPVGEANPHMHPLWQTAEQFGAVC 3760
FPVGEANPH+HPLWQTAEQFGAVC
Sbjct: 1116 FPVGEANPHLHPLWQTAEQFGAVC 1139