BLASTX nr result
ID: Zingiber25_contig00000582
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00000582
(632 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838860.1| hypothetical protein AMTR_s00002p00266120 [A... 87 3e-15
ref|XP_006644788.1| PREDICTED: photosystem II reaction center W ... 80 5e-13
ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [S... 79 1e-12
ref|XP_006576193.1| PREDICTED: uncharacterized protein LOC100526... 78 2e-12
ref|NP_001236601.1| uncharacterized protein LOC100526966 [Glycin... 77 3e-12
gb|EXB26577.1| Photosystem II reaction center W protein [Morus n... 77 4e-12
ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycin... 76 7e-12
ref|XP_004242350.1| PREDICTED: photosystem II reaction center W ... 76 9e-12
ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Caps... 75 1e-11
gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus pe... 75 2e-11
ref|XP_006424011.1| hypothetical protein CICLE_v10029551mg [Citr... 74 3e-11
ref|XP_006417879.1| hypothetical protein EUTSA_v10009104mg [Eutr... 74 3e-11
ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arab... 74 3e-11
ref|XP_006487787.1| PREDICTED: photosystem II reaction center W ... 74 5e-11
ref|XP_004495141.1| PREDICTED: photosystem II reaction center W ... 74 5e-11
dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgar... 74 5e-11
ref|NP_180615.1| photosystem II reaction center W protein [Arabi... 74 5e-11
ref|XP_006352753.1| PREDICTED: photosystem II reaction center W ... 73 6e-11
ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutr... 73 6e-11
ref|NP_001044402.1| Os01g0773700 [Oryza sativa Japonica Group] g... 73 6e-11
>ref|XP_006838860.1| hypothetical protein AMTR_s00002p00266120 [Amborella trichopoda]
gi|548841366|gb|ERN01429.1| hypothetical protein
AMTR_s00002p00266120 [Amborella trichopoda]
Length = 128
Score = 87.4 bits (215), Expect = 3e-15
Identities = 58/128 (45%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Frame = -3
Query: 525 VNSAVPASTFAHRAVLPRQSAT-------GLPQLACKGGRSVRCSMEAKWRTVATTSTGX 367
+ + ST A +++ R SAT GLP LA KGG VRCS+EAK T
Sbjct: 4 ITATTGTSTLALASLISRVSATKQSPIILGLPTLAKKGG--VRCSLEAKPSTNPCVGAAL 61
Query: 366 XXXXXXXXXXXXXXXVDERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLEE 187
DERLSTE WILFGVFGLIWALYF+YTSTLEE
Sbjct: 62 VASVATISSPALALV-DERLSTEGTGLSLGISNNLLAWILFGVFGLIWALYFIYTSTLEE 120
Query: 186 DEDSALSL 163
DE+S LSL
Sbjct: 121 DEESGLSL 128
>ref|XP_006644788.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Oryza brachyantha]
Length = 128
Score = 80.1 bits (196), Expect = 5e-13
Identities = 53/125 (42%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Frame = -3
Query: 537 MATVVNSAVPASTFAHRAVLPRQSATGLPQLACKGGRSVRCSMEAKWRTV----ATTSTG 370
MATV SA A+T RAVL R +A GLPQ+ + VRCS + A G
Sbjct: 1 MATV--SAAAATTVVARAVLARPNALGLPQMRARRSERVRCSYSKDGKEASSPAAVKGAG 58
Query: 369 XXXXXXXXXXXXXXXXVDERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLE 190
VDER+STE GWIL GVFGLIW+LY +YTS LE
Sbjct: 59 ASLLAMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLE 118
Query: 189 EDEDS 175
EDE+S
Sbjct: 119 EDEES 123
>ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor]
gi|241930553|gb|EES03698.1| hypothetical protein
SORBIDRAFT_03g036090 [Sorghum bicolor]
Length = 126
Score = 78.6 bits (192), Expect = 1e-12
Identities = 54/129 (41%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Frame = -3
Query: 537 MATVVNSAVPASTFAHRAVLPRQSATGLPQLACKGGRSVRCSMEAKWRTVATTSTGXXXX 358
MATV SA A+T RA + R +A GLPQL + R VRCS V+ + G
Sbjct: 1 MATV--SAAAATTVVARAAIARPNALGLPQLRARSER-VRCSYAKDAAAVSAKAAGASLL 57
Query: 357 XXXXXXXXXXXXV----DERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLE 190
DER+STE GWIL GVFGLIW+LY +YTS L+
Sbjct: 58 AAAGAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSDLD 117
Query: 189 EDEDSALSL 163
EDE+S LSL
Sbjct: 118 EDEESGLSL 126
>ref|XP_006576193.1| PREDICTED: uncharacterized protein LOC100526966 isoform X1 [Glycine
max]
Length = 123
Score = 78.2 bits (191), Expect = 2e-12
Identities = 51/106 (48%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Frame = -3
Query: 468 SATGLPQLACKGGRSVRCSMEAKWRTVATTSTGXXXXXXXXXXXXXXXXV----DERLST 301
+ TGLP +A K GR VRCSME K + + G DERLST
Sbjct: 20 NCTGLPAMA-KAGR-VRCSMEEKPSSSSNLGMGASLLAAAAAATMSSPAAMALVDERLST 77
Query: 300 EXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLEEDEDSALSL 163
E GWILFGVFGLIWAL+F+YTSTLEEDE+S LSL
Sbjct: 78 EGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLEEDEESGLSL 123
>ref|NP_001236601.1| uncharacterized protein LOC100526966 [Glycine max]
gi|255631268|gb|ACU16001.1| unknown [Glycine max]
Length = 133
Score = 77.4 bits (189), Expect = 3e-12
Identities = 57/135 (42%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Frame = -3
Query: 537 MATVVNSAVPASTFAHRAVLPR------QSATGLPQLACKGGRSVRCSMEAKWRTVATTS 376
MAT++ S VL R + GLP +A K GR VRCSME K + +
Sbjct: 1 MATIIAGTPTTSITRTGHVLKRPVGASSSTVLGLPAMA-KAGR-VRCSMEEKPSSSSNLG 58
Query: 375 TGXXXXXXXXXXXXXXXXV----DERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFL 208
G DERLSTE GWILFGVFGLIWAL+F+
Sbjct: 59 MGASLLAAAAAATMSSPAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFV 118
Query: 207 YTSTLEEDEDSALSL 163
YTSTLEEDE+S LSL
Sbjct: 119 YTSTLEEDEESGLSL 133
>gb|EXB26577.1| Photosystem II reaction center W protein [Morus notabilis]
Length = 136
Score = 77.0 bits (188), Expect = 4e-12
Identities = 52/132 (39%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Frame = -3
Query: 534 ATVVNSAVPASTFAHRAVLPRQSAT--GLPQLACKGGRSVRCSMEAKWRTVATTS----- 376
A+ S++ + H+ L QS+ LP ++ +GG+ VRCSME K + S
Sbjct: 6 ASAPTSSIVRAALLHKPSLGAQSSPLLALPAMSKRGGK-VRCSMEGKSSEEESNSKMGMS 64
Query: 375 -TGXXXXXXXXXXXXXXXXVDERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTS 199
+ VDERLSTE WIL GVFGL+WALYF+YTS
Sbjct: 65 ASLMAAALAATMSSPAVALVDERLSTEGTGLPFGLSNNLLSWILLGVFGLVWALYFVYTS 124
Query: 198 TLEEDEDSALSL 163
TLEEDE+S LSL
Sbjct: 125 TLEEDEESGLSL 136
>ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycine max]
gi|255627917|gb|ACU14303.1| unknown [Glycine max]
Length = 132
Score = 76.3 bits (186), Expect = 7e-12
Identities = 55/134 (41%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Frame = -3
Query: 537 MATVVNSAVPASTFAHRAVLPR------QSATGLPQLACKGGRSVRCSMEAKWRTVATTS 376
MAT++ S VL R + GLP +A G VRCSME K + +
Sbjct: 1 MATIIAGIPTTSITRAGLVLKRPVGASSSTVLGLPAMAKAG--KVRCSMEEKPSSSSNIG 58
Query: 375 TGXXXXXXXXXXXXXXXXV---DERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLY 205
G + DERLSTE GWILFGVFGLIWALYF+Y
Sbjct: 59 MGASLLAAAVAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVY 118
Query: 204 TSTLEEDEDSALSL 163
STLEEDE+S LSL
Sbjct: 119 ASTLEEDEESGLSL 132
>ref|XP_004242350.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum lycopersicum]
Length = 128
Score = 75.9 bits (185), Expect = 9e-12
Identities = 51/131 (38%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = -3
Query: 552 LAPPLMATVVNSAVPASTFAHRA-VLPRQSATGLPQLACKGGRSVRCSMEAKWRTVATTS 376
+A + A S H+A L R S GLP + GR V+CSME + +
Sbjct: 1 MASSITACTTTSLAAREALLHKASALSRPSVLGLPSMRKNVGR-VKCSMERE--DSKSGI 57
Query: 375 TGXXXXXXXXXXXXXXXXVDERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTST 196
G VDER+STE GWILFGVFGL+W+LY +YTS+
Sbjct: 58 CGSLVAATLSFSPTAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLVWSLYTVYTSS 117
Query: 195 LEEDEDSALSL 163
L+EDEDSA+SL
Sbjct: 118 LDEDEDSAMSL 128
>ref|XP_006295756.1| hypothetical protein CARUB_v10024876mg [Capsella rubella]
gi|482564464|gb|EOA28654.1| hypothetical protein
CARUB_v10024876mg [Capsella rubella]
Length = 133
Score = 75.5 bits (184), Expect = 1e-11
Identities = 52/128 (40%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = -3
Query: 534 ATVVNSAVPASTFAHRAVLPRQSATGLPQLACKGGRSVRCSMEAKWRTVATTSTGXXXXX 355
A+ V++A PA V GLP + K G VRCSME K V+ G
Sbjct: 8 ASTVSAARPA-LLLKPTVAVSAPVLGLPPMGKKKG-GVRCSMETKQGNVSAMGAGVSAAA 65
Query: 354 XXXXXXXXXXXV----DERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLEE 187
DER+STE GWILFGVFGLIW YF+YTS+LEE
Sbjct: 66 TAALSAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVYTSSLEE 125
Query: 186 DEDSALSL 163
DE+S LSL
Sbjct: 126 DEESGLSL 133
>gb|EMJ01588.1| hypothetical protein PRUPE_ppa012535mg [Prunus persica]
Length = 165
Score = 75.1 bits (183), Expect = 2e-11
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Frame = -3
Query: 573 HKLEEAHLAPPLMATVVNSAVPASTFAHRAVLPRQSAT--GLPQLACKGGRSVRCSMEAK 400
+ L + + + A+ S++ ++ H+ + SAT LP LA KG V CSME K
Sbjct: 25 NSLSKLKIMATITASTPTSSITRASLVHKPSVGAPSATVLALPSLARKG--KVGCSMEGK 82
Query: 399 WRT----VATTSTGXXXXXXXXXXXXXXXXVDERLSTEXXXXXXXXXXXXXGWILFGVFG 232
+ + ++ VD+RLSTE GWILFGVFG
Sbjct: 83 KESSNSKMGKGASLAAAAMAATMSSPAMALVDDRLSTEGTGLPFGLSNNILGWILFGVFG 142
Query: 231 LIWALYFLYTSTLEEDEDSALSL 163
LIW YF+YTS+LEEDE+S LSL
Sbjct: 143 LIWTFYFIYTSSLEEDEESGLSL 165
>ref|XP_006424011.1| hypothetical protein CICLE_v10029551mg [Citrus clementina]
gi|557525945|gb|ESR37251.1| hypothetical protein
CICLE_v10029551mg [Citrus clementina]
Length = 137
Score = 74.3 bits (181), Expect = 3e-11
Identities = 48/135 (35%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Frame = -3
Query: 540 LMATVVNSAVPASTFAHRAVLPRQSATGLPQLACKGGRSVRCSMEAKWRTVATTSTGXXX 361
+ +T + +P S F + + GLP +A GR VRCS++ K A++ +
Sbjct: 4 ISSTNFPALLPRSGFVPKGLTHASPVCGLPAMATTRGR-VRCSLDEKAPAAASSKSSRAS 62
Query: 360 XXXXXXXXXXXXXV---------DERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFL 208
DER++TE GWILFGVFGLIWALYF+
Sbjct: 63 MVASLMAAAAALSTAAGSAMALVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFI 122
Query: 207 YTSTLEEDEDSALSL 163
YT LEEDE+S LSL
Sbjct: 123 YTGDLEEDEESGLSL 137
>ref|XP_006417879.1| hypothetical protein EUTSA_v10009104mg [Eutrema salsugineum]
gi|557095650|gb|ESQ36232.1| hypothetical protein
EUTSA_v10009104mg [Eutrema salsugineum]
Length = 128
Score = 74.3 bits (181), Expect = 3e-11
Identities = 47/110 (42%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = -3
Query: 486 AVLPRQSATGLPQLACKGGRSVRCSMEAKWRTVATT--STGXXXXXXXXXXXXXXXXVDE 313
A + + G+P+++ K V+CSME K +T S VDE
Sbjct: 20 AAISTEPIYGVPRMS-KRSSGVKCSMETKQEKSSTAGASAVAAMLTAVMSSSPAMALVDE 78
Query: 312 RLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLEEDEDSALSL 163
R+STE GWILFGVFGLIWALYF YTS+L+EDEDS LSL
Sbjct: 79 RMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTSSLDEDEDSGLSL 128
>ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp.
lyrata] gi|297326958|gb|EFH57378.1| hypothetical protein
ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 73.9 bits (180), Expect = 3e-11
Identities = 51/128 (39%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = -3
Query: 534 ATVVNSAVPASTFAHRAVLPRQSATGLPQLACKGGRSVRCSMEAKWRTVATTSTGXXXXX 355
A+ V++A PA V GLP + K G VRCSME K V+ G
Sbjct: 8 ASTVSAARPA-ILLKPTVAVSAPVLGLPPMGKKKG-GVRCSMETKQGNVSAMGAGVSAAA 65
Query: 354 XXXXXXXXXXXV----DERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLEE 187
DER+STE GWILFGVFGLIW +F+YTS+LEE
Sbjct: 66 TAALTAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLEE 125
Query: 186 DEDSALSL 163
DE+S LSL
Sbjct: 126 DEESGLSL 133
>ref|XP_006487787.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Citrus sinensis]
Length = 137
Score = 73.6 bits (179), Expect = 5e-11
Identities = 50/135 (37%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Frame = -3
Query: 540 LMATVVNSAVPASTFAHRAVLPRQSATGLPQLACKGGRSVRCSMEAKWRTVAT------- 382
+ +T + +P S F + + G+P +A GR VRCS+E K A+
Sbjct: 4 ISSTNFPALLPRSGFVPKGLTHASPVYGMPAMATTRGR-VRCSLEEKAPAAASGKSSKAS 62
Query: 381 --TSTGXXXXXXXXXXXXXXXXVDERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFL 208
S VDER++TE GWILFGVFGLIWALYF+
Sbjct: 63 MVASLMAAAAALSTAAGPAMALVDERMTTEGTGLPFGLSNNTLGWILFGVFGLIWALYFI 122
Query: 207 YTSTLEEDEDSALSL 163
YT LEEDE+S LSL
Sbjct: 123 YTGDLEEDEESGLSL 137
>ref|XP_004495141.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Cicer arietinum]
Length = 138
Score = 73.6 bits (179), Expect = 5e-11
Identities = 52/137 (37%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Frame = -3
Query: 540 LMATVVNSAVPASTFAHRAVLPRQSAT--GLPQLACKGGRSVRCSMEAKWRTVATTSTGX 367
+ AT +++ + A + L S+ GLP++ K GR VRCSME K +V +
Sbjct: 4 ISATTTTASIARACIAQKRPLAVSSSPVLGLPRMT-KVGR-VRCSMEGKTSSVEKNNNSK 61
Query: 366 XXXXXXXXXXXXXXXV---------DERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALY 214
+ DER+STE GWILFGVFGLIWALY
Sbjct: 62 MGMGASLVAAACGAAMSSPAAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALY 121
Query: 213 FLYTSTLEEDEDSALSL 163
F+Y S+LEEDE+S LSL
Sbjct: 122 FIYASSLEEDEESGLSL 138
>dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521836|dbj|BAK00494.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 128
Score = 73.6 bits (179), Expect = 5e-11
Identities = 53/127 (41%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Frame = -3
Query: 537 MATVVNSAVPASTFAHRAVLPRQSATGLPQLACKGGRSVRCSMEAKWRTVATTSTGXXXX 358
MAT+ SA A+T RA + R A GLPQL +G R VRCS +K T A + G
Sbjct: 1 MATI--SAAAATTVVARAAIARPQALGLPQLRTRGER-VRCSY-SKEATPAAAARGAGAS 56
Query: 357 XXXXXXXXXXXXV------DERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTST 196
DER+STE GWIL GVFGLIW+LY +YTS
Sbjct: 57 LLAAAGAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSG 116
Query: 195 LEEDEDS 175
L+EDE+S
Sbjct: 117 LDEDEES 123
>ref|NP_180615.1| photosystem II reaction center W protein [Arabidopsis thaliana]
gi|122064936|sp|Q39194.2|PSBW_ARATH RecName:
Full=Photosystem II reaction center W protein,
chloroplastic; AltName: Full=PSII 6.1 kDa protein;
Flags: Precursor gi|11762232|gb|AAG40394.1|AF325042_1
At2g30570 [Arabidopsis thaliana]
gi|14030715|gb|AAK53032.1|AF375448_1 At2g30570/T6B20.8
[Arabidopsis thaliana] gi|1946362|gb|AAB63080.1|
photosystem II reaction center 6.1KD protein
[Arabidopsis thaliana] gi|21593002|gb|AAM64951.1|
photosystem II reaction center 6.1KD protein
[Arabidopsis thaliana] gi|23506075|gb|AAN28897.1|
At2g30570/T6B20.8 [Arabidopsis thaliana]
gi|330253315|gb|AEC08409.1| photosystem II reaction
center W protein [Arabidopsis thaliana]
Length = 133
Score = 73.6 bits (179), Expect = 5e-11
Identities = 50/128 (39%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = -3
Query: 534 ATVVNSAVPASTFAHRAVLPRQSATGLPQLACKGGRSVRCSMEAKWRTVATTSTGXXXXX 355
A+ V++A PA + GLP + K G VRCSME K V+ G
Sbjct: 8 ASTVSAARPALLLKPTVAISAP-VLGLPPMGKKKG-GVRCSMETKQGNVSVMGAGVSAAA 65
Query: 354 XXXXXXXXXXXV----DERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLEE 187
DER+STE GWILFGVFGLIW +F+YTS+LEE
Sbjct: 66 TAALTAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLEE 125
Query: 186 DEDSALSL 163
DE+S LSL
Sbjct: 126 DEESGLSL 133
>ref|XP_006352753.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum tuberosum]
Length = 132
Score = 73.2 bits (178), Expect = 6e-11
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Frame = -3
Query: 552 LAPPLMATVVNSAVPASTFAHRAVLPRQS-ATGLPQLACKGGRSVRCSMEAKWRTVATTS 376
+A + A S VP + H+ L R S GLP + G+ V+CSME +
Sbjct: 1 MATSISACTTTSLVPRAALVHKPSLSRPSFVLGLPAMRKNMGK-VKCSMERGESKLGICG 59
Query: 375 T--GXXXXXXXXXXXXXXXXVDERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYT 202
+ VDER+STE GWILFGVFGL+W+LY +YT
Sbjct: 60 SLVAAACAATITISPTAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLVWSLYTVYT 119
Query: 201 STLEEDEDSALSL 163
S+L+EDEDS +SL
Sbjct: 120 SSLDEDEDSGMSL 132
>ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutrema salsugineum]
gi|557111329|gb|ESQ51613.1| hypothetical protein
EUTSA_v10017409mg [Eutrema salsugineum]
Length = 133
Score = 73.2 bits (178), Expect = 6e-11
Identities = 44/103 (42%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Frame = -3
Query: 459 GLPQLACKGGRSVRCSMEAKWRTVATTSTGXXXXXXXXXXXXXXXXV----DERLSTEXX 292
GLP ++ + G VRCSME K V+ G D+R+STE
Sbjct: 32 GLPPMSKRKG-GVRCSMEKKQENVSVVGAGVSAAATAALTAVMSNPAMALVDDRMSTEGT 90
Query: 291 XXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLEEDEDSALSL 163
GWILFGVFGLIW YF+YTS+LEEDE+S LSL
Sbjct: 91 GLPFGLSNNLLGWILFGVFGLIWTFYFVYTSSLEEDEESGLSL 133
>ref|NP_001044402.1| Os01g0773700 [Oryza sativa Japonica Group]
gi|75112952|sp|Q5ZBY9.1|PSBW_ORYSJ RecName:
Full=Photosystem II reaction center W protein,
chloroplastic; AltName: Full=PSII 6.1 kDa protein;
Flags: Precursor gi|53793363|dbj|BAD52944.1| putative
photosystem II reaction center W protein [Oryza sativa
Japonica Group] gi|113533933|dbj|BAF06316.1|
Os01g0773700 [Oryza sativa Japonica Group]
gi|125527886|gb|EAY76000.1| hypothetical protein
OsI_03925 [Oryza sativa Indica Group]
gi|215765750|dbj|BAG87447.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767329|dbj|BAG99557.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 124
Score = 73.2 bits (178), Expect = 6e-11
Identities = 52/123 (42%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Frame = -3
Query: 537 MATVVNSAVPASTFAHRAVLPRQSATGLPQLACKGGRSVRC--SMEAKWRTVATTSTGXX 364
MATV SA A++ RAVL GLPQ+ + VRC S EA A G
Sbjct: 1 MATV--SAAAATSVVARAVLA--GPLGLPQMRARRSERVRCNYSKEAATPAAAVKGAGAS 56
Query: 363 XXXXXXXXXXXXXXVDERLSTEXXXXXXXXXXXXXGWILFGVFGLIWALYFLYTSTLEED 184
VDER+STE GWIL GVFGLIW+LY +YTS LEED
Sbjct: 57 LLAMAATAAPAMALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEED 116
Query: 183 EDS 175
E+S
Sbjct: 117 EES 119