BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00000378
         (3920 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts...  1704   0.0  
ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts...  1690   0.0  
ref|XP_006590595.1| PREDICTED: regulator of nonsense transcripts...  1686   0.0  
gb|ESW28609.1| hypothetical protein PHAVU_002G003300g [Phaseolus...  1686   0.0  
gb|ESW28608.1| hypothetical protein PHAVU_002G003300g [Phaseolus...  1686   0.0  
ref|XP_004245855.1| PREDICTED: regulator of nonsense transcripts...  1686   0.0  
ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts...  1685   0.0  
ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts...  1685   0.0  
ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts...  1684   0.0  
ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of...  1683   0.0  
ref|XP_006358610.1| PREDICTED: regulator of nonsense transcripts...  1682   0.0  
gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indi...  1682   0.0  
ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati...  1682   0.0  
dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japon...  1682   0.0  
ref|XP_003611424.1| Regulator of nonsense transcripts-like prote...  1681   0.0  
gb|EMJ11627.1| hypothetical protein PRUPE_ppa000334mg [Prunus pe...  1680   0.0  
ref|XP_004511759.1| PREDICTED: regulator of nonsense transcripts...  1680   0.0  
ref|XP_004511758.1| PREDICTED: regulator of nonsense transcripts...  1680   0.0  
gb|EOY24106.1| Regulator of nonsense transcripts 1 [Theobroma ca...  1679   0.0  
ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts...  1676   0.0  

>ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
            vinifera] gi|297742168|emb|CBI33955.3| unnamed protein
            product [Vitis vinifera]
          Length = 1267

 Score = 1704 bits (4413), Expect = 0.0
 Identities = 849/973 (87%), Positives = 889/973 (91%), Gaps = 4/973 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            NNLY+TASQPDTG DAYTF+EFNTQ +  +YP+F++  +PS                   
Sbjct: 6    NNLYDTASQPDTGNDAYTFIEFNTQGEDFDYPDFRDPIRPSAWPTPSDSISDAADHQSDA 65

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPA-VDTLAAGMGALNFEETGDE 523
                 A   A                K RGAAG  +++ A VD LAAGM  LNFEETGD+
Sbjct: 66   SPVSAAPGSAT---------------KARGAAGSSSSSQAAVDALAAGMSGLNFEETGDD 110

Query: 524  -GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVRAKHK 700
              YE+GKG+FTEHAC+YCGVQNPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVRAKHK
Sbjct: 111  DNYEYGKGDFTEHACRYCGVQNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHK 170

Query: 701  EVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDMNWDL 880
            EVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDMNWDL
Sbjct: 171  EVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDL 230

Query: 881  SQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEKPGVD 1060
            SQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDASLEDLEKPGVD
Sbjct: 231  SQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVD 290

Query: 1061 DEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRVAYFV 1240
            DEPQP++LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV++RWD+GLNKKR+AYFV
Sbjct: 291  DEPQPIALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRIAYFV 350

Query: 1241 FPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDLSH 1420
            FPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHVIKLTAQEEVALELRASQGVPVD++H
Sbjct: 351  FPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDVNH 410

Query: 1421 GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRFGAPG 1600
            GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRNTLPRRFGAPG
Sbjct: 411  GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPG 470

Query: 1601 LPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 1780
            LPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV
Sbjct: 471  LPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 530

Query: 1781 DQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLKDEQG 1960
            DQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSEKSELHKLQ LKDEQG
Sbjct: 531  DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQG 590

Query: 1961 ELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQATEPE 2140
            ELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPE
Sbjct: 591  ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPE 650

Query: 2141 CLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQYRMH 2320
            CLIPLVLGVKQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQYRMH
Sbjct: 651  CLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMH 710

Query: 2321 PCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 2500
            P LSEFPSNSFYEGTLQNGVTINERQS+GIDFPWPVPNRPMFFYVQMGQEEISASGTSYL
Sbjct: 711  PSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 770

Query: 2501 NRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 2680
            NRTEAANVEKIVTTFLRSGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS
Sbjct: 771  NRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 830

Query: 2681 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 2860
            VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW
Sbjct: 831  VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 890

Query: 2861 NGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGYVGSS 3037
            N LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL++GGGPGIV +DN G V SS
Sbjct: 891  NSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGGGPGIVPNDNFGTVTSS 950

Query: 3038 VP-LDKRGGRSKG 3073
             P  D+R  R +G
Sbjct: 951  SPSADRRSSRGRG 963



 Score =  309 bits (791), Expect = 7e-81
 Identities = 152/251 (60%), Positives = 175/251 (69%), Gaps = 12/251 (4%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQPLTG-IGSVFNFPPLDNPSSQPSIG 3374
            A+P VP                    HLPHQQ SQ   G +GS FNFP L+NP+SQPS+G
Sbjct: 1017 AVPHVPPPGSRGFGAGRGNAGAPIGSHLPHQQGSQQAVGNLGSTFNFPALENPNSQPSVG 1076

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G +T MPVQG SQTFRDG SIG MSQ+FLGDDFKSQGSH+ YN+ADFSTQAS+S
Sbjct: 1077 GPLSQPGFVTNMPVQGPSQTFRDGFSIGGMSQDFLGDDFKSQGSHVPYNVADFSTQASQS 1136

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GY LDYATQG QAG+PGS++NQN+Q GY+  GTG+D++ Q+YM HGSQGLFTQ GFNDPS
Sbjct: 1137 GYTLDYATQGAQAGFPGSFLNQNSQAGYTRFGTGNDFMSQDYMAHGSQGLFTQVGFNDPS 1196

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNV-----------XXXXXXXXXXXNQ 3881
            QD++SQSHFG+A P  LQSQGL+NPLYSQPF HYN                        Q
Sbjct: 1197 QDDASQSHFGVANPNPLQSQGLMNPLYSQPFAHYNTQPLNLQAPQQQQQQQQQTPPQQGQ 1256

Query: 3882 SSANLKPHYNG 3914
            SS N K HYNG
Sbjct: 1257 SSQNQKLHYNG 1267


>ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine max]
          Length = 1266

 Score = 1690 bits (4376), Expect = 0.0
 Identities = 839/978 (85%), Positives = 884/978 (90%), Gaps = 5/978 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQE-LSQPSRXXXXXXXXXXXXXXXXX 343
            NNL+ETASQPDTG DAYTFLEFNTQ +  +YPEF++ +  P                   
Sbjct: 6    NNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPLERGGG 65

Query: 344  XXXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPAVDTLAAGMGALNFEETGDE 523
               D Q+    +                GR  +GG  ++  VD LAAGM  LNFE+TGD+
Sbjct: 66   GGSDHQSDASPVSVAPGSATKG------GRSGSGGGNSSQMVDALAAGMSGLNFEDTGDD 119

Query: 524  -GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVRAKHK 700
              YE+GKG+FTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVRAKHK
Sbjct: 120  DNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHK 179

Query: 701  EVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDMNWDL 880
            EVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDMNWDL
Sbjct: 180  EVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDL 239

Query: 881  SQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEKPGVD 1060
            SQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDAS EDLEKPGVD
Sbjct: 240  SQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGVD 299

Query: 1061 DEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRVAYFV 1240
            DEPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV++RWD+GLNKKRVAYFV
Sbjct: 300  DEPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRVAYFV 359

Query: 1241 FPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDLSH 1420
            FPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHVIKLTAQEEVALELRASQGVPVD++H
Sbjct: 360  FPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDVNH 419

Query: 1421 GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRFGAPG 1600
            GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRN LPRRFGAPG
Sbjct: 420  GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPG 479

Query: 1601 LPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 1780
            LPELNASQVFAVKSVLQ+PISLIQGPPGTGKTVTSAA+VYHMAKQGQGQVLVCAPSNVAV
Sbjct: 480  LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAV 539

Query: 1781 DQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLKDEQG 1960
            DQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTS+KSELHKLQ LKDEQG
Sbjct: 540  DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQG 599

Query: 1961 ELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQATEPE 2140
            ELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPE
Sbjct: 600  ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPE 659

Query: 2141 CLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQYRMH 2320
            CLIPLVLG KQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQYRMH
Sbjct: 660  CLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMH 719

Query: 2321 PCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 2500
            PCLSEFPSNSFYEGTLQNGVT+NER+S+GIDFPWPVPNRPMFFYVQMGQEEISASGTSYL
Sbjct: 720  PCLSEFPSNSFYEGTLQNGVTVNERKSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 779

Query: 2501 NRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 2680
            NRTEAANVEKIVTTFL+SGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS
Sbjct: 780  NRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 839

Query: 2681 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 2860
            VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW
Sbjct: 840  VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 899

Query: 2861 NGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGYVGS- 3034
            N LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL+YGGGPGI  +DN G VGS 
Sbjct: 900  NSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIAANDNFGSVGSG 959

Query: 3035 -SVPLDKRGGRSKGHSYV 3085
                 D+R  R +G SY+
Sbjct: 960  AGTSSDRRSSRGRG-SYI 976



 Score =  267 bits (683), Expect = 2e-68
 Identities = 132/242 (54%), Positives = 163/242 (67%), Gaps = 3/242 (1%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQ-PLTGIGSVFNFPPLDNPSSQPSIG 3374
            A+P VP                    HLPHQQ +Q P+  IGS FNFP L+NP+SQPS+G
Sbjct: 1027 AVPHVPSPGSRGFGAGRGNSGAPIGNHLPHQQGTQQPIGNIGSTFNFPALENPNSQPSVG 1086

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P+SQ G    MPVQG  Q+FRD  S+  MSQ+FLGDDFKSQGSH+ YN+ DFSTQAS+S
Sbjct: 1087 GPSSQPGFANNMPVQGAGQSFRDQFSMPGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQS 1146

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GYA+DYATQG Q G+ G+++NQN+Q GYS  G+G+D++ Q+YM HGSQGLFTQ GF DP 
Sbjct: 1147 GYAVDYATQGAQGGFSGNFLNQNSQAGYSRFGSGNDFMSQDYMGHGSQGLFTQVGFTDPL 1206

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNV--XXXXXXXXXXXNQSSANLKPHY 3908
            QD+++QSHF +A    LQSQ  ++ LYSQPF HYN               Q+S N K HY
Sbjct: 1207 QDDATQSHFSVANANPLQSQ--MSSLYSQPFAHYNTQPLNMQATQQQPQAQNSQNQKIHY 1264

Query: 3909 NG 3914
            NG
Sbjct: 1265 NG 1266


>ref|XP_006590595.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine max]
          Length = 1268

 Score = 1686 bits (4366), Expect = 0.0
 Identities = 839/978 (85%), Positives = 881/978 (90%), Gaps = 5/978 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            NNL+ETASQPDTG DAYTFLEFNTQ +  +YPEF++   P R                  
Sbjct: 6    NNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRD---PIRSPVAWPTPSDSLADPSER 62

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGR-GAAGGQTTAPAVDTLAAGMGALNFEETGDE 523
                                       GR G+ GG  ++  VD LAAGM  LNFE+TGD+
Sbjct: 63   GGGGGGGSDHQSDTSPVSAAPGSATKGGRSGSGGGGNSSQMVDALAAGMSGLNFEDTGDD 122

Query: 524  -GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVRAKHK 700
              YE+GKG+FTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVRAKHK
Sbjct: 123  DNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHK 182

Query: 701  EVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDMNWDL 880
            EVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDMNWDL
Sbjct: 183  EVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDL 242

Query: 881  SQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEKPGVD 1060
            SQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDAS EDLEKPGVD
Sbjct: 243  SQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGVD 302

Query: 1061 DEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRVAYFV 1240
            DEPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV++RWD+GLNKKRVAYFV
Sbjct: 303  DEPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRVAYFV 362

Query: 1241 FPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDLSH 1420
            FPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHVIKLTAQEEVALELRA+QGVPVD++H
Sbjct: 363  FPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRANQGVPVDVNH 422

Query: 1421 GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRFGAPG 1600
            GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRN LPRRFGAPG
Sbjct: 423  GFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPG 482

Query: 1601 LPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAV 1780
            LPELNASQVFAVKSVLQ+PISLIQGPPGTGKTVTSAA+VYHMAKQGQGQVLVCAPSNVAV
Sbjct: 483  LPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAV 542

Query: 1781 DQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLKDEQG 1960
            DQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTS+KSELHKLQ LKDEQG
Sbjct: 543  DQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQG 602

Query: 1961 ELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQATEPE 2140
            ELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPE
Sbjct: 603  ELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPE 662

Query: 2141 CLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQYRMH 2320
            CLIPLVLG KQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQYRMH
Sbjct: 663  CLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMH 722

Query: 2321 PCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 2500
            PCLSEFPSNSFYEGTLQNGVT+NERQS+GIDFPWPVPNRPMFFYVQMGQEEISASGTSYL
Sbjct: 723  PCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 782

Query: 2501 NRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 2680
            NRTEAANVEKIVTTFL+SGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS
Sbjct: 783  NRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVAS 842

Query: 2681 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 2860
            VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW
Sbjct: 843  VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 902

Query: 2861 NGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGYVGS- 3034
            N LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL+YGGGPGI  +DN G VGS 
Sbjct: 903  NSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIASNDNFGNVGSG 962

Query: 3035 -SVPLDKRGGRSKGHSYV 3085
                 D+R  R +G SY+
Sbjct: 963  AGTSSDRRSSRGRG-SYI 979



 Score =  259 bits (663), Expect = 5e-66
 Identities = 127/214 (59%), Positives = 155/214 (72%), Gaps = 2/214 (0%)
 Frame = +3

Query: 3276 HLPHQQSSQPLTGIGSVFNFPPLDNPSSQPSIGAPASQTGLMTQMPVQGLSQTFRDGLSI 3455
            HLPHQQ +Q    IGS FNFP L+NP+SQPS+G P SQ G    M VQG  Q+FRD  S+
Sbjct: 1058 HLPHQQGTQQ--PIGSTFNFPALENPNSQPSVGGPLSQPGFANNMHVQGAGQSFRDQFSM 1115

Query: 3456 GSMSQEFLGDDFKSQGSHITYNMADFSTQASRSGYALDYATQGPQAGYPGSYMNQNTQPG 3635
              MSQ+FLGDDFKSQGSH+ YN+ DFSTQAS+SGYA+DYATQG Q G+PG+++NQN+Q G
Sbjct: 1116 PGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQSGYAVDYATQGAQGGFPGNFLNQNSQAG 1175

Query: 3636 YSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPSQDESSQSHFGIAGPGSLQSQGLLNPLY 3815
            YS  G+G+D++ Q+YM HGSQGLFTQ GF+DP QD+++QSHF +A    LQSQ  +N LY
Sbjct: 1176 YSRFGSGNDFMSQDYMGHGSQGLFTQVGFSDPLQDDATQSHFSVANANPLQSQ--MNSLY 1233

Query: 3816 SQPFPHYNV--XXXXXXXXXXXNQSSANLKPHYN 3911
            SQPF HYN               Q+S N K HYN
Sbjct: 1234 SQPFAHYNTQPLNMQATQQQPQAQNSQNQKIHYN 1267


>gb|ESW28609.1| hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
          Length = 1268

 Score = 1686 bits (4366), Expect = 0.0
 Identities = 840/982 (85%), Positives = 884/982 (90%), Gaps = 9/982 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQE-----LSQPSRXXXXXXXXXXXXX 331
            NNL++TASQPDTG DAYTFLEFNTQ +  +YPEF++     ++ P+              
Sbjct: 6    NNLFDTASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGAV 65

Query: 332  XXXXXXXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPAVDTLAAGMGALNFEE 511
                      AS  +                 GR   GG  ++  VD LAAGM  LNFE+
Sbjct: 66   GGPGSDHQSDASPVSAAPGSATKG--------GRSGNGGGHSSQMVDALAAGMSGLNFED 117

Query: 512  TGDE-GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVR 688
            TGD+  YE+GKG+FTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVR
Sbjct: 118  TGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVR 177

Query: 689  AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDM 868
            AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDM
Sbjct: 178  AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDM 237

Query: 869  NWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEK 1048
            NWDLSQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDAS EDLEK
Sbjct: 238  NWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEK 297

Query: 1049 PGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRV 1228
            PGVDDEPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV++RWDVGLNKKRV
Sbjct: 298  PGVDDEPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDVGLNKKRV 357

Query: 1229 AYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPV 1408
            AYFVFPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHVIKLTAQEEVALELRASQGVPV
Sbjct: 358  AYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPV 417

Query: 1409 DLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRF 1588
            D++HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRN LPRRF
Sbjct: 418  DVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRF 477

Query: 1589 GAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 1768
            GAPGLPELNASQVFAVKSVLQ+PISLIQGPPGTGKTVTSAA+VYHMAKQGQGQVLVCAPS
Sbjct: 478  GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPS 537

Query: 1769 NVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLK 1948
            NVAVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTS+KSELHKLQ LK
Sbjct: 538  NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLK 597

Query: 1949 DEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQA 2128
            DEQGELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQA
Sbjct: 598  DEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQA 657

Query: 2129 TEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQ 2308
            TEPECLIPLVLG KQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQ
Sbjct: 658  TEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQ 717

Query: 2309 YRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASG 2488
            YRMHPCLSEFPSNSFYEGTLQNGVT+NERQS+GIDFPWPVPNRPMFFYVQMGQEEISASG
Sbjct: 718  YRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASG 777

Query: 2489 TSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 2668
            TSYLNRTEAANVEKIVTTFL+SGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI
Sbjct: 778  TSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 837

Query: 2669 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 2848
            EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK
Sbjct: 838  EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 897

Query: 2849 QPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGY 3025
            QPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL+YGGGPGI  +DN G 
Sbjct: 898  QPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIAANDNFGS 957

Query: 3026 VGS--SVPLDKRGGRSKGHSYV 3085
            VGS      D+R  R +G SY+
Sbjct: 958  VGSGAGTSSDRRSSRGRG-SYI 978



 Score =  273 bits (699), Expect = 3e-70
 Identities = 135/242 (55%), Positives = 165/242 (68%), Gaps = 3/242 (1%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQ-PLTGIGSVFNFPPLDNPSSQPSIG 3374
            A+P VP                    HLPHQQ +Q P+  IGS FNFP L+NP+SQPS+G
Sbjct: 1029 AVPHVPSPGSRGFGAGRGNSGAPIGNHLPHQQGTQQPIGNIGSTFNFPTLENPNSQPSVG 1088

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G    MPVQG  Q+FRD  S+  MSQ+FLGDDFKSQGSH+ YN+ DFSTQAS+S
Sbjct: 1089 GPLSQPGFANNMPVQGAGQSFRDQFSMPGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQS 1148

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GYA+D+ATQG Q G+ G+++NQN+Q GYS  G+G+D++ Q+YM HGSQGLFTQ GFNDP 
Sbjct: 1149 GYAVDFATQGAQGGFHGNFLNQNSQAGYSRFGSGNDFMSQDYMGHGSQGLFTQVGFNDPL 1208

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNVXXXXXXXXXXXN--QSSANLKPHY 3908
            QD+S+QSHFG+A    LQSQ  +N LYSQPF HYN            +  Q+S N K HY
Sbjct: 1209 QDDSTQSHFGVANANPLQSQ--MNSLYSQPFAHYNTQPLNMQASQQQSQTQNSQNQKIHY 1266

Query: 3909 NG 3914
            NG
Sbjct: 1267 NG 1268


>gb|ESW28608.1| hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
          Length = 1248

 Score = 1686 bits (4366), Expect = 0.0
 Identities = 840/982 (85%), Positives = 884/982 (90%), Gaps = 9/982 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQE-----LSQPSRXXXXXXXXXXXXX 331
            NNL++TASQPDTG DAYTFLEFNTQ +  +YPEF++     ++ P+              
Sbjct: 6    NNLFDTASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGAV 65

Query: 332  XXXXXXXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPAVDTLAAGMGALNFEE 511
                      AS  +                 GR   GG  ++  VD LAAGM  LNFE+
Sbjct: 66   GGPGSDHQSDASPVSAAPGSATKG--------GRSGNGGGHSSQMVDALAAGMSGLNFED 117

Query: 512  TGDE-GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVR 688
            TGD+  YE+GKG+FTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVR
Sbjct: 118  TGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVR 177

Query: 689  AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDM 868
            AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDM
Sbjct: 178  AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDM 237

Query: 869  NWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEK 1048
            NWDLSQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDAS EDLEK
Sbjct: 238  NWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEK 297

Query: 1049 PGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRV 1228
            PGVDDEPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV++RWDVGLNKKRV
Sbjct: 298  PGVDDEPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDVGLNKKRV 357

Query: 1229 AYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPV 1408
            AYFVFPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHVIKLTAQEEVALELRASQGVPV
Sbjct: 358  AYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPV 417

Query: 1409 DLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRF 1588
            D++HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRN LPRRF
Sbjct: 418  DVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRF 477

Query: 1589 GAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 1768
            GAPGLPELNASQVFAVKSVLQ+PISLIQGPPGTGKTVTSAA+VYHMAKQGQGQVLVCAPS
Sbjct: 478  GAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPS 537

Query: 1769 NVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLK 1948
            NVAVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTS+KSELHKLQ LK
Sbjct: 538  NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLK 597

Query: 1949 DEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQA 2128
            DEQGELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQA
Sbjct: 598  DEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQA 657

Query: 2129 TEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQ 2308
            TEPECLIPLVLG KQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQ
Sbjct: 658  TEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQ 717

Query: 2309 YRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASG 2488
            YRMHPCLSEFPSNSFYEGTLQNGVT+NERQS+GIDFPWPVPNRPMFFYVQMGQEEISASG
Sbjct: 718  YRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASG 777

Query: 2489 TSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 2668
            TSYLNRTEAANVEKIVTTFL+SGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI
Sbjct: 778  TSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 837

Query: 2669 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 2848
            EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK
Sbjct: 838  EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 897

Query: 2849 QPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGY 3025
            QPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL+YGGGPGI  +DN G 
Sbjct: 898  QPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGIAANDNFGS 957

Query: 3026 VGS--SVPLDKRGGRSKGHSYV 3085
            VGS      D+R  R +G SY+
Sbjct: 958  VGSGAGTSSDRRSSRGRG-SYI 978



 Score =  248 bits (633), Expect = 2e-62
 Identities = 117/200 (58%), Positives = 144/200 (72%), Gaps = 1/200 (0%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQ-PLTGIGSVFNFPPLDNPSSQPSIG 3374
            A+P VP                    HLPHQQ +Q P+  IGS FNFP L+NP+SQPS+G
Sbjct: 1029 AVPHVPSPGSRGFGAGRGNSGAPIGNHLPHQQGTQQPIGNIGSTFNFPTLENPNSQPSVG 1088

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G    MPVQG  Q+FRD  S+  MSQ+FLGDDFKSQGSH+ YN+ DFSTQAS+S
Sbjct: 1089 GPLSQPGFANNMPVQGAGQSFRDQFSMPGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQS 1148

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GYA+D+ATQG Q G+ G+++NQN+Q GYS  G+G+D++ Q+YM HGSQGLFTQ GFNDP 
Sbjct: 1149 GYAVDFATQGAQGGFHGNFLNQNSQAGYSRFGSGNDFMSQDYMGHGSQGLFTQVGFNDPL 1208

Query: 3735 QDESSQSHFGIAGPGSLQSQ 3794
            QD+S+QSHFG+A    LQSQ
Sbjct: 1209 QDDSTQSHFGVANANPLQSQ 1228


>ref|XP_004245855.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
            lycopersicum]
          Length = 1274

 Score = 1686 bits (4366), Expect = 0.0
 Identities = 844/986 (85%), Positives = 879/986 (89%), Gaps = 17/986 (1%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            N+LY+TASQPDTG D YTFLEFNTQ +  +YPEF ELSQP R                  
Sbjct: 6    NSLYDTASQPDTGNDVYTFLEFNTQGEEFDYPEFHELSQPIRSSAWPTPSDSLVSEVPDR 65

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQT-------------TAPAVDTLAAG 487
                  +  A                K RG  GG++              A AVD LAAG
Sbjct: 66   PQSSSDASQA--------------SGKSRGGDGGRSRSSSSSKISSNKAAAVAVDALAAG 111

Query: 488  MGALNFEETGD-EGYEFGKGNFT-EHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSG 661
            M  LNFEETGD E +E+GKG+F  EHACKYCGV NPACVVRCN+P+CRKWFCNSRGNTSG
Sbjct: 112  MSGLNFEETGDDENFEYGKGDFAVEHACKYCGVTNPACVVRCNVPSCRKWFCNSRGNTSG 171

Query: 662  SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPC 841
            SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPC
Sbjct: 172  SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPC 231

Query: 842  LNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNP 1021
            LNVNALKDMNWDLSQWCPLIDDRCFL WLVKVPSEQEQLRARQISAQQINK+EELWKTNP
Sbjct: 232  LNVNALKDMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKIEELWKTNP 291

Query: 1022 DASLEDLEKPGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRW 1201
            DA+LEDLEKPGVDDEPQPV LKYEDAYQYQN+FAPLIKLEADYDKMMKESQSKDN++VRW
Sbjct: 292  DANLEDLEKPGVDDEPQPVGLKYEDAYQYQNIFAPLIKLEADYDKMMKESQSKDNLTVRW 351

Query: 1202 DVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALE 1381
            D+GLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHVIKLTAQEEVALE
Sbjct: 352  DIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALE 411

Query: 1382 LRASQGVPVDLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQI 1561
            LRASQGVPVD++HG SVDFVWKSTSFDRMQ AMKTFAVDETSVSGYIYHHLLGHEVE Q+
Sbjct: 412  LRASQGVPVDVTHGLSVDFVWKSTSFDRMQTAMKTFAVDETSVSGYIYHHLLGHEVEMQM 471

Query: 1562 VRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQ 1741
            +RN LPRRFGAPGLPELNASQVFAVKSVLQKP+SLIQGPPGTGKTVTSAAIVYHMAKQGQ
Sbjct: 472  IRNALPRRFGAPGLPELNASQVFAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQ 531

Query: 1742 GQVLVCAPSNVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKS 1921
            GQVLVCAPSNVAVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSEKS
Sbjct: 532  GQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKS 591

Query: 1922 ELHKLQLLKDEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQ 2101
            ELHKLQ LKDEQGELSS DEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQ
Sbjct: 592  ELHKLQQLKDEQGELSSGDEKKYKALKRATEREIAQSADVICCTCVGAGDPRLANFRFRQ 651

Query: 2102 VLIDESTQATEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 2281
            VLIDESTQA EPECLIPLVLG KQ++LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG
Sbjct: 652  VLIDESTQAAEPECLIPLVLGAKQIVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG 711

Query: 2282 HKPFRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQM 2461
             KP RLQVQYRMHP LSEFPSNSFYEGTLQNGVTINERQS GIDFPWPVPNRPMFFYVQM
Sbjct: 712  VKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTINERQSLGIDFPWPVPNRPMFFYVQM 771

Query: 2462 GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGA 2641
            GQEEISASGTSYLNRTEAANVEK+VTTFL+SGV+PSQIGVITPYEGQRAYIVNYMSRNGA
Sbjct: 772  GQEEISASGTSYLNRTEAANVEKLVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGA 831

Query: 2642 LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 2821
            LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI
Sbjct: 832  LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVI 891

Query: 2822 LGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPG 2998
            LGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL++GGGPG
Sbjct: 892  LGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGGGPG 951

Query: 2999 IVHSDNIGYVGSSVP-LDKRGGRSKG 3073
            IV SDN G   SS P  D+R  RS+G
Sbjct: 952  IVPSDNYGSPASSNPNADRRSSRSRG 977



 Score =  268 bits (684), Expect = 2e-68
 Identities = 135/246 (54%), Positives = 168/246 (68%), Gaps = 7/246 (2%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQ-PLTGIGSVFNFPPLDNPSSQPSIG 3374
            A+P VPQ                   HL HQQ+SQ P+   G  FNF  L+NP+SQPS G
Sbjct: 1030 AVPHVPQLGSRGFGAGRGNANAPIGSHLSHQQASQQPIGSHGPNFNFSALENPNSQPS-G 1088

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G  + M VQG SQTFRDG S+G MSQ+FLGDDFKSQGSH++Y++ADFSTQAS+S
Sbjct: 1089 GPLSQPGYASNMAVQGPSQTFRDGFSMGGMSQDFLGDDFKSQGSHVSYHVADFSTQASQS 1148

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GYA+DY  QG QAG+PG+Y+N+N+Q GYS  G+G++++ Q+YM +GSQGLFTQAG++DPS
Sbjct: 1149 GYAVDYVNQGAQAGFPGNYLNRNSQAGYSRFGSGNEFMSQDYMTYGSQGLFTQAGYSDPS 1208

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNVXXXXXXXXXXXN------QSSANL 3896
            Q++SSQ+HFG++    L SQ LLNPLYSQPF HYN                   Q S N 
Sbjct: 1209 QEDSSQNHFGMSNANPLHSQSLLNPLYSQPFGHYNTQPLNMQSSQPQQPQAPQVQGSQNQ 1268

Query: 3897 KPHYNG 3914
            K HYNG
Sbjct: 1269 KLHYNG 1274


>ref|XP_004244550.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
            lycopersicum]
          Length = 1264

 Score = 1685 bits (4364), Expect = 0.0
 Identities = 839/978 (85%), Positives = 877/978 (89%), Gaps = 9/978 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            NNLY+TASQPDTG DAYTFLEFNTQ +  +YPEFQELSQP R                  
Sbjct: 6    NNLYDTASQPDTGNDAYTFLEFNTQGEEFDYPEFQELSQPIRSSAWPTPSDSLVSEVPDR 65

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTT------APAVDTLAAGMGALNFE 508
                +AS                   K RG  G          A  VD LAAGM  LNFE
Sbjct: 66   PPSSEASPST----------------KSRGGGGNSNVSSSSNQASVVDALAAGMSGLNFE 109

Query: 509  ETGD-EGYEFGKGNF-TEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHL 682
            ETGD EG+E+GKG+F  EHACKYCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHL
Sbjct: 110  ETGDDEGFEYGKGDFGVEHACKYCGVTNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHL 169

Query: 683  VRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALK 862
            VRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALK
Sbjct: 170  VRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALK 229

Query: 863  DMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDL 1042
            DMNWDLSQWCPLIDDRCFL WLVKVPSEQEQLRARQISAQQINK+EELWKTNPDA+LEDL
Sbjct: 230  DMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDATLEDL 289

Query: 1043 EKPGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKK 1222
            EKPGVDDEPQPV+LKYEDAYQYQN+FAPLIKLEADYDKMMKESQSKDN+++RWD+GLNKK
Sbjct: 290  EKPGVDDEPQPVALKYEDAYQYQNIFAPLIKLEADYDKMMKESQSKDNLTIRWDIGLNKK 349

Query: 1223 RVAYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGV 1402
            RVAYFVFPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHV+KLTAQEEVALELRASQGV
Sbjct: 350  RVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVVKLTAQEEVALELRASQGV 409

Query: 1403 PVDLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPR 1582
            P+D++HGFSVDFVWKSTSFDRMQ AMKTFAVDETSVSGYIYHHLLGHEVE Q+VRNTLPR
Sbjct: 410  PIDVNHGFSVDFVWKSTSFDRMQSAMKTFAVDETSVSGYIYHHLLGHEVEMQMVRNTLPR 469

Query: 1583 RFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 1762
            RFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA
Sbjct: 470  RFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 529

Query: 1763 PSNVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQL 1942
            PSNVAVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSEKSELHKLQ 
Sbjct: 530  PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 589

Query: 1943 LKDEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDEST 2122
            LKDEQGELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDEST
Sbjct: 590  LKDEQGELSSSDEKKYKALKRATEREIAQSADVICCTCVGAGDPRLANFRFRQVLIDEST 649

Query: 2123 QATEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQ 2302
            QATEPECLIPLVLG KQ +LVGDHCQLGPVIMCKKAARAGLAQSLFERLV LG KP RLQ
Sbjct: 650  QATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVFLGVKPIRLQ 709

Query: 2303 VQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISA 2482
            VQYRMHP LSEFPSNSFYEGTLQNGVT+NER S+GIDFPWPVPNRPMFFYVQMGQEEISA
Sbjct: 710  VQYRMHPALSEFPSNSFYEGTLQNGVTVNERLSSGIDFPWPVPNRPMFFYVQMGQEEISA 769

Query: 2483 SGTSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK 2662
            SGTSYLNRTEAANVEKIVTTFL+SGV+PSQIGVITPYEGQRAYIVNYM+RNG+LRQQLYK
Sbjct: 770  SGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYK 829

Query: 2663 EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 2842
            EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL
Sbjct: 830  EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 889

Query: 2843 SKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNI 3019
            SKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL++GGGPG V  D+ 
Sbjct: 890  SKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFFGGGPGAVQGDSF 949

Query: 3020 GYVGSSVPLDKRGGRSKG 3073
            G   S    D+R  R +G
Sbjct: 950  G-SASGPSADRRNSRPRG 966



 Score =  281 bits (720), Expect = 1e-72
 Identities = 132/215 (61%), Positives = 163/215 (75%), Gaps = 1/215 (0%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQ-PLTGIGSVFNFPPLDNPSSQPSIG 3374
            A+P VPQ                   HLPH Q SQ P+  IGS FNFP LDNP+SQPSIG
Sbjct: 1019 AVPHVPQPGSRGFGAGRGNANAPIGSHLPHHQGSQQPVGSIGSNFNFPALDNPNSQPSIG 1078

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G  + M +QG  Q+FRDGLS+GSMSQ+F+GDDFKSQGSH+ YN+ADFSTQAS+ 
Sbjct: 1079 GPLSQPGYASNMAIQGPGQSFRDGLSMGSMSQDFVGDDFKSQGSHVPYNVADFSTQASQG 1138

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
             YA+DY+TQG QAG+PG+++NQN+Q GYS  G+G++++ Q+YM HGSQGLFTQAG+NDP 
Sbjct: 1139 AYAVDYSTQGAQAGFPGNFLNQNSQSGYSRFGSGNEFMSQDYMAHGSQGLFTQAGYNDPL 1198

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYN 3839
            QD+ SQ+HFG++   SLQSQ LLNP+YSQPF HYN
Sbjct: 1199 QDDGSQNHFGMSNVNSLQSQSLLNPIYSQPFAHYN 1233


>ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
            sativus]
          Length = 1268

 Score = 1685 bits (4363), Expect = 0.0
 Identities = 840/975 (86%), Positives = 874/975 (89%), Gaps = 6/975 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            NNL+ETASQPDT  DAYTFLEFNTQ +  +YPEF++  +P                    
Sbjct: 6    NNLFETASQPDTANDAYTFLEFNTQGEDFDYPEFRDPIRPPVAWPTPSDSLADHTDRGGG 65

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTA---PAVDTLAAGMGALNFEETG 517
                  + P                 KGR   G   T      VD LAAGM  L FE+TG
Sbjct: 66   SDHQSDASPV--------SAAPGSATKGRTGGGSGNTGGNNQMVDALAAGMSGLTFEDTG 117

Query: 518  DE-GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVRAK 694
            D+  YEFGKGNFTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVRAK
Sbjct: 118  DDDNYEFGKGNFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAK 177

Query: 695  HKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDMNW 874
            HKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDMNW
Sbjct: 178  HKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNW 237

Query: 875  DLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEKPG 1054
            DLSQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDASLEDLEKPG
Sbjct: 238  DLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLEKPG 297

Query: 1055 VDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRVAY 1234
            VDDEPQPV+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV+VRWD+GLNKKR+AY
Sbjct: 298  VDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRIAY 357

Query: 1235 FVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDL 1414
            FVFPKEDNELRLVPGDELRLRYSGD AHPAW SVGHVIKLTAQEEVALELRASQGVPVD+
Sbjct: 358  FVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVPVDV 417

Query: 1415 SHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRFGA 1594
             HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRNTLPRRFGA
Sbjct: 418  VHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 477

Query: 1595 PGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 1774
            PGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV
Sbjct: 478  PGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 537

Query: 1775 AVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLKDE 1954
            AVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSE+SELHKLQ LKDE
Sbjct: 538  AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQLKDE 597

Query: 1955 QGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQATE 2134
            QGELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATE
Sbjct: 598  QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATE 657

Query: 2135 PECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQYR 2314
            PECLIPLVLG KQ +LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQYR
Sbjct: 658  PECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYR 717

Query: 2315 MHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTS 2494
            MHP LSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTS
Sbjct: 718  MHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTS 777

Query: 2495 YLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV 2674
            YLNRTEAANVEKIVTTFLRSGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV
Sbjct: 778  YLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV 837

Query: 2675 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 2854
            ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP
Sbjct: 838  ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 897

Query: 2855 LWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGYVG 3031
            LWN LLTHYKEHECLVEGPLNNLKQSM+QFQKPKKIY   RL++ GGPG+V +DN G V 
Sbjct: 898  LWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPNDNFGPVA 957

Query: 3032 SSVP-LDKRGGRSKG 3073
             S P  D+R  R +G
Sbjct: 958  PSGPNADRRSSRGRG 972



 Score =  267 bits (683), Expect = 2e-68
 Identities = 131/244 (53%), Positives = 164/244 (67%), Gaps = 5/244 (2%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQPLTG-IGSVFNFPPLDNPSSQPSIG 3374
            A+P VPQ                    LP+QQ SQ   G +GS FNFP L++P+SQPS+G
Sbjct: 1025 AVPHVPQPGSRGFGAGRGNAGAPIGSQLPNQQGSQQNIGNLGSTFNFPGLESPNSQPSVG 1084

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G +  MPVQ  +QTFRDG S+G +SQ+FLGDDFKSQGSH+ YN+ DFSTQAS++
Sbjct: 1085 GPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVPYNVTDFSTQASQT 1144

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GY +DY  QG Q G+PGS++NQN+Q GYS  GTG+D++ Q+YM HGSQGLFTQ GF+DPS
Sbjct: 1145 GYPIDYVGQGGQGGFPGSFLNQNSQSGYSRFGTGNDFMSQDYMNHGSQGLFTQVGFSDPS 1204

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYN----VXXXXXXXXXXXNQSSANLKP 3902
             DE+SQSH+ +     LQSQG++N LYSQPF HYN                 QSS N K 
Sbjct: 1205 LDEASQSHYNVTNANPLQSQGMMNSLYSQPFAHYNTQPSTLQAPPQQQPQQGQSSQNQKI 1264

Query: 3903 HYNG 3914
            H++G
Sbjct: 1265 HFSG 1268


>ref|XP_006362492.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
            tuberosum]
          Length = 1264

 Score = 1684 bits (4361), Expect = 0.0
 Identities = 841/979 (85%), Positives = 879/979 (89%), Gaps = 10/979 (1%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            NNLY+TASQPDTG DAYTFLEFNTQ +  +YPEFQELSQP R                  
Sbjct: 6    NNLYDTASQPDTGNDAYTFLEFNTQGEEFDYPEFQELSQPIRSSAWPTPSDSLVSEVPDR 65

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTT------APAVDTLAAGMGALNFE 508
                +AS                   K RG  G          A  VD LAAGM  LNFE
Sbjct: 66   PPSSEASPST----------------KSRGGGGNSNVSSSSNQASVVDALAAGMSGLNFE 109

Query: 509  ETGD-EGYEFGKGNF-TEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHL 682
            ETGD EG+E+GKG+F  EHACKYCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHL
Sbjct: 110  ETGDDEGFEYGKGDFGVEHACKYCGVANPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHL 169

Query: 683  VRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALK 862
            VRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALK
Sbjct: 170  VRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALK 229

Query: 863  DMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDL 1042
            DMNWDLSQWCPLIDDRCFL WLVKVPSEQEQLRARQISAQQINK+EELWKTNPDA+LEDL
Sbjct: 230  DMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDATLEDL 289

Query: 1043 EKPGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKK 1222
            EKPGVDDEPQPV+LKYEDAYQYQN+FAPLIKLEADYDKMMKESQSKDN+++RWD+GLNKK
Sbjct: 290  EKPGVDDEPQPVALKYEDAYQYQNIFAPLIKLEADYDKMMKESQSKDNLTIRWDIGLNKK 349

Query: 1223 RVAYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGV 1402
            RVAYFVFPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHV+KLTAQEEVALELR SQGV
Sbjct: 350  RVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVVKLTAQEEVALELRVSQGV 409

Query: 1403 PVDLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPR 1582
            PVD++HGFSVDFVWKSTSFDRMQ AMKTFAVDETSVSGYIYHHLLGHEVE Q+VRNTLPR
Sbjct: 410  PVDVNHGFSVDFVWKSTSFDRMQSAMKTFAVDETSVSGYIYHHLLGHEVEMQMVRNTLPR 469

Query: 1583 RFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 1762
            RFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA
Sbjct: 470  RFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 529

Query: 1763 PSNVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQL 1942
            PSNVAVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSEKSELHKLQ 
Sbjct: 530  PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 589

Query: 1943 LKDEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDEST 2122
            LKDEQGELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDEST
Sbjct: 590  LKDEQGELSSSDEKKYKALKRATEREIAQSADVICCTCVGAGDPRLANFRFRQVLIDEST 649

Query: 2123 QATEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQ 2302
            QATEPECLIPLVLG KQ +LVGDHCQLGPVIMCKKAARAGLAQSLFERLV LG KP RLQ
Sbjct: 650  QATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVFLGVKPIRLQ 709

Query: 2303 VQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISA 2482
            VQYRMHP LSEFPSNSFYEGTLQNGVT+NER S+GIDFPWPVPNRPMFFYVQMGQEEISA
Sbjct: 710  VQYRMHPALSEFPSNSFYEGTLQNGVTVNERLSSGIDFPWPVPNRPMFFYVQMGQEEISA 769

Query: 2483 SGTSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK 2662
            SGTSYLNRTEAANVEKIVTTFL+SGV+PSQIGVITPYEGQRAYIVNYM+RNG+LRQQLYK
Sbjct: 770  SGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYK 829

Query: 2663 EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 2842
            EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL
Sbjct: 830  EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 889

Query: 2843 SKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNI 3019
            SKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL++GGGPG V  D+ 
Sbjct: 890  SKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFFGGGPGAVPGDSF 949

Query: 3020 G-YVGSSVPLDKRGGRSKG 3073
            G  +GSS   D+R  R +G
Sbjct: 950  GSALGSSA--DRRNSRPRG 966



 Score =  282 bits (721), Expect = 9e-73
 Identities = 138/245 (56%), Positives = 168/245 (68%), Gaps = 7/245 (2%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQ-PLTGIGSVFNFPPLDNPSSQPSIG 3374
            A+P VPQ                   HLPH Q SQ P+  IGS FNFP LDNP+SQPSIG
Sbjct: 1019 AVPHVPQPGSRGFGAGRGNANAPIGSHLPHHQGSQQPVGSIGSNFNFPALDNPNSQPSIG 1078

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G  + M +QG  Q+FRDG S+GSMSQ+F+GDDFKSQGSH+ YN+ADFSTQAS+ 
Sbjct: 1079 GPLSQPGYASNMAIQGPGQSFRDGHSMGSMSQDFVGDDFKSQGSHVPYNVADFSTQASQG 1138

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
             YA+DY TQG QAG+PG+++NQN+Q GYS  G+G++++ Q+YM HGSQGLFTQAG+NDPS
Sbjct: 1139 AYAVDYVTQGAQAGFPGNFLNQNSQSGYSRFGSGNEFMSQDYMSHGSQGLFTQAGYNDPS 1198

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNVXXXXXXXXXXXNQSS------ANL 3896
            QD+ SQ+HFG++   SLQSQ LLNP+YSQPF HYN             Q         N 
Sbjct: 1199 QDDGSQNHFGMSNVNSLQSQSLLNPIYSQPFAHYNTQPLNLQSSQPQQQQGPQSQGFQNQ 1258

Query: 3897 KPHYN 3911
            K HYN
Sbjct: 1259 KLHYN 1263


>ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
            homolog [Cucumis sativus]
          Length = 1246

 Score = 1683 bits (4359), Expect = 0.0
 Identities = 839/975 (86%), Positives = 874/975 (89%), Gaps = 6/975 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            NNL+ETASQPDT  DAYTFLEFNTQ +  +YPEF++  +P                    
Sbjct: 6    NNLFETASQPDTANDAYTFLEFNTQGEDFDYPEFRDPIRPPVAWPTPSDSLADHTDRGGG 65

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTA---PAVDTLAAGMGALNFEETG 517
                  + P                 KGR   G   T      VD LAAGM  L F++TG
Sbjct: 66   SDHQSDASPV--------SAAPGSATKGRTGGGSGNTGGNNQMVDALAAGMSGLTFKDTG 117

Query: 518  DE-GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVRAK 694
            D+  YEFGKGNFTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVRAK
Sbjct: 118  DDDNYEFGKGNFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAK 177

Query: 695  HKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDMNW 874
            HKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDMNW
Sbjct: 178  HKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNW 237

Query: 875  DLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEKPG 1054
            DLSQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDASLEDLEKPG
Sbjct: 238  DLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLEKPG 297

Query: 1055 VDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRVAY 1234
            VDDEPQPV+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV+VRWD+GLNKKR+AY
Sbjct: 298  VDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRIAY 357

Query: 1235 FVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDL 1414
            FVFPKEDNELRLVPGDELRLRYSGD AHPAW SVGHVIKLTAQEEVALELRASQGVPVD+
Sbjct: 358  FVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVPVDV 417

Query: 1415 SHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRFGA 1594
             HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRNTLPRRFGA
Sbjct: 418  VHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGA 477

Query: 1595 PGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 1774
            PGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV
Sbjct: 478  PGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNV 537

Query: 1775 AVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLKDE 1954
            AVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSE+SELHKLQ LKDE
Sbjct: 538  AVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQLKDE 597

Query: 1955 QGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQATE 2134
            QGELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATE
Sbjct: 598  QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATE 657

Query: 2135 PECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQYR 2314
            PECLIPLVLG KQ +LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQYR
Sbjct: 658  PECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYR 717

Query: 2315 MHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTS 2494
            MHP LSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTS
Sbjct: 718  MHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTS 777

Query: 2495 YLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV 2674
            YLNRTEAANVEKIVTTFLRSGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV
Sbjct: 778  YLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEV 837

Query: 2675 ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 2854
            ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP
Sbjct: 838  ASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQP 897

Query: 2855 LWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGYVG 3031
            LWN LLTHYKEHECLVEGPLNNLKQSM+QFQKPKKIY   RL++ GGPG+V +DN G V 
Sbjct: 898  LWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPNDNFGPVA 957

Query: 3032 SSVP-LDKRGGRSKG 3073
             S P  D+R  R +G
Sbjct: 958  PSGPNADRRSSRGRG 972



 Score =  252 bits (644), Expect = 8e-64
 Identities = 118/202 (58%), Positives = 148/202 (73%), Gaps = 4/202 (1%)
 Frame = +3

Query: 3321 SVFNFPPLDNPSSQPSIGAPASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQ 3500
            S FNFP L++P+SQPS+G P SQ G +  MPVQ  +QTFRDG S+G +SQ+FLGDDFKSQ
Sbjct: 1045 SAFNFPGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQ 1104

Query: 3501 GSHITYNMADFSTQASRSGYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEY 3680
            GSH+ YN+ DFSTQAS++GY +DY  QG Q G+PGS++NQN+Q GYS  GTG+D++ Q+Y
Sbjct: 1105 GSHVPYNVTDFSTQASQTGYPIDYVGQGGQGGFPGSFLNQNSQSGYSRFGTGNDFMSQDY 1164

Query: 3681 MPHGSQGLFTQAGFNDPSQDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYN----VXX 3848
            M HGSQGLFTQ GF+DPS DE+SQSH+ +     LQSQG++N LYSQPF HYN       
Sbjct: 1165 MNHGSQGLFTQVGFSDPSLDEASQSHYNVTNANPLQSQGMMNSLYSQPFAHYNTQPSTLQ 1224

Query: 3849 XXXXXXXXXNQSSANLKPHYNG 3914
                      QSS N K H++G
Sbjct: 1225 APPQQQPQQGQSSQNQKIHFSG 1246


>ref|XP_006358610.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Solanum
            tuberosum]
          Length = 1267

 Score = 1682 bits (4357), Expect = 0.0
 Identities = 845/989 (85%), Positives = 885/989 (89%), Gaps = 14/989 (1%)
 Frame = +2

Query: 149  MAAQSVNNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXX 328
            M +QS N+LY+TASQPDTG DAYTFLEFNTQ +  +YPEF ELSQP R            
Sbjct: 1    MDSQS-NSLYDTASQPDTGNDAYTFLEFNTQGEEFDYPEFHELSQPIRSSAWPTPSDSLV 59

Query: 329  XXXXXXXXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTT----------APAVDTL 478
                        +  A                K RG  GG+++          A AVD L
Sbjct: 60   SEAPDRPQSSSDASQA--------------SGKSRGGDGGRSSSSKISSNKAAAVAVDAL 105

Query: 479  AAGMGALNFEETGD-EGYEFGKGNFT-EHACKYCGVQNPACVVRCNIPTCRKWFCNSRGN 652
            AAGM  LNFEETGD E +E+GKG+F  EHACKYCGV NPACVVRCN+P+CRKWFCNSRGN
Sbjct: 106  AAGMSGLNFEETGDDESFEYGKGDFAVEHACKYCGVTNPACVVRCNVPSCRKWFCNSRGN 165

Query: 653  TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCR 832
            TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCR
Sbjct: 166  TSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCR 225

Query: 833  EPCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWK 1012
            EPCLNVNALKDMNWDLSQWCPLIDDRCFL WLVKVPSEQEQLRARQISAQQINK+EELWK
Sbjct: 226  EPCLNVNALKDMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKIEELWK 285

Query: 1013 TNPDASLEDLEKPGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVS 1192
            TNPDA+LEDLEKPGVDDEPQPV LKYEDAYQYQN+FAPLIKLEADYDKMMKESQSKDN++
Sbjct: 286  TNPDANLEDLEKPGVDDEPQPVGLKYEDAYQYQNIFAPLIKLEADYDKMMKESQSKDNLT 345

Query: 1193 VRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEV 1372
            VRWD+GLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHVIKLTAQEEV
Sbjct: 346  VRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEV 405

Query: 1373 ALELRASQGVPVDLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE 1552
            ALELRASQGVPVD++HG SVDFVWKSTSFDRMQ AMKTFAVDETSVSGYIYHHLLGHEVE
Sbjct: 406  ALELRASQGVPVDVTHGLSVDFVWKSTSFDRMQTAMKTFAVDETSVSGYIYHHLLGHEVE 465

Query: 1553 QQIVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAK 1732
             Q+VRNT+PRRFGAPGLPELNASQVFAVKSVLQKP+SLIQGPPGTGKTVTSAAIVYHMAK
Sbjct: 466  MQMVRNTVPRRFGAPGLPELNASQVFAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAK 525

Query: 1733 QGQGQVLVCAPSNVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTS 1912
            QGQGQVLVCAPSNVAVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTS
Sbjct: 526  QGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTS 585

Query: 1913 EKSELHKLQLLKDEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFR 2092
            EKSEL+KLQ LKDEQGELSS DEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFR
Sbjct: 586  EKSELYKLQQLKDEQGELSSGDEKKYKALKRATEREIAQSADVICCTCVGAGDPRLANFR 645

Query: 2093 FRQVLIDESTQATEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLV 2272
            FRQVLIDESTQA EPECLIPLVLG KQ++LVGDHCQLGPVIMCKKAARAGLAQSLFERLV
Sbjct: 646  FRQVLIDESTQAGEPECLIPLVLGAKQIVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 705

Query: 2273 LLGHKPFRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFY 2452
            LLG KP RLQVQYRMHP LSEFPSNSFYEGTLQNGVTINERQS GIDFPWPVPNRPMFFY
Sbjct: 706  LLGVKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTINERQSLGIDFPWPVPNRPMFFY 765

Query: 2453 VQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSR 2632
            VQMGQEEIS+SGTSYLNRTEAA+VEK+VTTFL+SGV+PSQIGVITPYEGQRAYIVNYMSR
Sbjct: 766  VQMGQEEISSSGTSYLNRTEAASVEKLVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSR 825

Query: 2633 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 2812
            NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG
Sbjct: 826  NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 885

Query: 2813 IVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGG 2989
            IVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL++GG
Sbjct: 886  IVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGG 945

Query: 2990 GPGIVHSDNIGYVGSSVP-LDKRGGRSKG 3073
            GPGIV SDN G   SS P  D+R   S+G
Sbjct: 946  GPGIVPSDNYGSPASSNPNADRRSSHSRG 974



 Score =  269 bits (687), Expect = 8e-69
 Identities = 132/241 (54%), Positives = 164/241 (68%), Gaps = 2/241 (0%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQ-PLTGIGSVFNFPPLDNPSSQPSIG 3374
            A+P VP                    HL HQQ+SQ P+   G  FNF  L+NP++QPS G
Sbjct: 1027 AVPHVPHPGNRGFGAGRGNANAPIGSHLSHQQASQQPIGSHGPNFNFSALENPNTQPSGG 1086

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G  + M +QG SQTFRDG S+G MSQ+FLGDDFKSQGSH+ Y++ DFSTQAS+S
Sbjct: 1087 GPLSQPGYASNMAIQGPSQTFRDGFSMGGMSQDFLGDDFKSQGSHVPYHVTDFSTQASQS 1146

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GYA+DY  QG QAG+PG+Y+N N+Q GYS  G+G++++ Q+YM HGSQGLFTQAG++DPS
Sbjct: 1147 GYAVDYVNQGAQAGFPGNYLNHNSQAGYSRFGSGNEFMSQDYMAHGSQGLFTQAGYSDPS 1206

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNVXXXXXXXXXXXN-QSSANLKPHYN 3911
            Q++S Q+HFG++    LQSQ LLNPLYSQPF HYN              Q S N K HYN
Sbjct: 1207 QEDSPQNHFGMSNANPLQSQSLLNPLYSQPFGHYNTQPLNMQSSQPQQPQGSQNQKLHYN 1266

Query: 3912 G 3914
            G
Sbjct: 1267 G 1267


>gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
          Length = 1277

 Score = 1682 bits (4357), Expect = 0.0
 Identities = 834/994 (83%), Positives = 886/994 (89%), Gaps = 21/994 (2%)
 Frame = +2

Query: 167  NNLYETASQPD----TGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXX 334
            ++LYETASQPD      GDAYTFLEFNTQ D  +YP+F+ELSQP+R              
Sbjct: 12   DDLYETASQPDPPASAAGDAYTFLEFNTQGDDFDYPDFRELSQPARSAPPTSAPGVPGSA 71

Query: 335  XXXXXXDLQ-----------ASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPAVDTLA 481
                                + +P L                 R +A  + +A A D LA
Sbjct: 72   GSPSPSSSSWPPPPPPPPDASQDPDLAPREATTPPASSSSPSPRASAKARASAAAADGLA 131

Query: 482  AGMGALNFEE-----TGDEGYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSR 646
            +G+ AL+FEE      G++GY++GKG+F EHAC+YCG+ NPACV RCN+P+CRKWFCNSR
Sbjct: 132  SGVAALSFEEPLGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSR 191

Query: 647  GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLL 826
            GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA  E+VVVLL
Sbjct: 192  GNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLL 251

Query: 827  CREPCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEEL 1006
            CREPCL+VNALKDMNWDLSQWCPLIDDRCFL WLVKVPSEQEQLRARQISAQQINK+EEL
Sbjct: 252  CREPCLSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEEL 311

Query: 1007 WKTNPDASLEDLEKPGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDN 1186
            WKTNPDASLEDLEKPGVDDEPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKD+
Sbjct: 312  WKTNPDASLEDLEKPGVDDEPQQVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDS 371

Query: 1187 VSVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQE 1366
            ++VRWD+GLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGD++HPAWQSVGHVIKLTAQE
Sbjct: 372  LTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGHVIKLTAQE 431

Query: 1367 EVALELRASQGVPVDLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHE 1546
            EVALELRASQGVPVDL+HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHE
Sbjct: 432  EVALELRASQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHE 491

Query: 1547 VEQQIVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHM 1726
            VE QI+RNTLPRRFGAPGLPELNASQV AVKSVLQKPISLIQGPPGTGKTVTSAAIVYHM
Sbjct: 492  VEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHM 551

Query: 1727 AKQGQGQVLVCAPSNVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLD 1906
            AKQGQGQVLVCAPSNVAVDQLA+KISSTGLKVVRLCAKSREAV SPVEHLTLHYQVRHLD
Sbjct: 552  AKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLD 611

Query: 1907 TSEKSELHKLQLLKDEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDN 2086
            TSEKSELHKLQ LKDEQGELSSSDEKK+KALKRATEREILQSADVICCTCVGAGDPRL N
Sbjct: 612  TSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLAN 671

Query: 2087 FRFRQVLIDESTQATEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFER 2266
            FRFRQVLIDESTQATEPECLIPLVLGVKQV+LVGDHCQLGPVIMCKKAARAGLAQSLFER
Sbjct: 672  FRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFER 731

Query: 2267 LVLLGHKPFRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMF 2446
            LV+LG KPFRLQVQYRMHPCLS+FPSN FYEGTLQNGVT+NERQ+ GIDFPWPVPNRPMF
Sbjct: 732  LVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMF 791

Query: 2447 FYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYM 2626
            FYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV+PSQIGVITPYEGQRAYIVNYM
Sbjct: 792  FYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYM 851

Query: 2627 SRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 2806
            SRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR
Sbjct: 852  SRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR 911

Query: 2807 YGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYY 2983
            YGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL+ 
Sbjct: 912  YGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFL 971

Query: 2984 GGGPGIVHSDNIGYVGSSVPLDKRGGRSKGHSYV 3085
            GGG G++   + G  G++   DKR GR KGHS+V
Sbjct: 972  GGGQGVMQGASFGAAGTNPVADKRSGRGKGHSFV 1005



 Score =  290 bits (742), Expect = 3e-75
 Identities = 138/189 (73%), Positives = 160/189 (84%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3276 HLPHQQSSQP-LTGIGSVFNFPPLDNPSSQPSIGAPASQTGLMTQMPVQGLSQTFRDGLS 3452
            HL HQQSSQ  + G+GS FNFP L+NPSSQPS G P SQTGLMTQMPVQGLSQTFRDG S
Sbjct: 1080 HLAHQQSSQQAMGGMGSAFNFPGLENPSSQPSGGGPMSQTGLMTQMPVQGLSQTFRDGFS 1139

Query: 3453 IGSMSQEFLGDDFKSQGSHITYNMADFSTQASRSGYALDYATQGPQAGYPGSYMNQNTQP 3632
            IG MSQ+F GDDFKSQGSH+ YN+ADFSTQAS+ GY +DY +QGPQ+GYPG+Y+NQN  P
Sbjct: 1140 IGGMSQDFFGDDFKSQGSHVAYNIADFSTQASQGGYGVDY-SQGPQSGYPGNYLNQNAHP 1198

Query: 3633 GYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPSQDESSQSHFGIAGPGSLQSQGLLNPL 3812
            GYSH+G  +D V Q++M HGS G+FTQAG+NDPSQDESSQ HFG+AGPG LQSQ ++NPL
Sbjct: 1199 GYSHMGAANDIVSQDHMAHGSHGMFTQAGYNDPSQDESSQMHFGMAGPG-LQSQPMMNPL 1257

Query: 3813 YSQPFPHYN 3839
            YSQ + HYN
Sbjct: 1258 YSQSYAHYN 1266


>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
            gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
            protein, putative [Ricinus communis]
          Length = 1280

 Score = 1682 bits (4356), Expect = 0.0
 Identities = 841/980 (85%), Positives = 880/980 (89%), Gaps = 11/980 (1%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFD-EYPEFQE-LSQPSRXXXXXXXXXXXXXXXX 340
            +NLYETASQPDTG DAYTFLEFNTQ + D +YPEF+  ++ P+                 
Sbjct: 6    SNLYETASQPDTGTDAYTFLEFNTQGESDFDYPEFRSPVAWPTPSDSLAAATSSSSAVDP 65

Query: 341  XXXXDLQASEPALXXXXXXXXXXXXXXX------KGRGAAGGQTTAPAVDTLAAGMGALN 502
                   A+  A                        +   GG  +   V+ + + MG LN
Sbjct: 66   TASDHRGAAAAATSSDHHSADSAAAASSPVSSSSSSKAMRGGSNSQGVVEGIVSAMGGLN 125

Query: 503  FEETGDE-GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNH 679
            FEETGDE GYEFGKG+FTEHAC+YCGV NPACVVRCNIP+CRKWFCNSRGNTSGSHIVNH
Sbjct: 126  FEETGDEDGYEFGKGDFTEHACRYCGVSNPACVVRCNIPSCRKWFCNSRGNTSGSHIVNH 185

Query: 680  LVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNAL 859
            LVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCLNVNAL
Sbjct: 186  LVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNVNAL 245

Query: 860  KDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLED 1039
            KDMNWDLSQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDA+LED
Sbjct: 246  KDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDATLED 305

Query: 1040 LEKPGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNK 1219
            LEKPG+DDEPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV++RWD+GLNK
Sbjct: 306  LEKPGIDDEPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNK 365

Query: 1220 KRVAYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQG 1399
            KR+AYFVFPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHVIKLTAQEEVALELRASQG
Sbjct: 366  KRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQG 425

Query: 1400 VPVDLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLP 1579
            VPVD++HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q VRNTLP
Sbjct: 426  VPVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVENQNVRNTLP 485

Query: 1580 RRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC 1759
            RRFGAPGLPELNASQVFAVKSVLQ+PISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC
Sbjct: 486  RRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC 545

Query: 1760 APSNVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQ 1939
            APSNVAVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSEKSELHKLQ
Sbjct: 546  APSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQ 605

Query: 1940 LLKDEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDES 2119
             LKDEQGELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDES
Sbjct: 606  QLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDES 665

Query: 2120 TQATEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRL 2299
            TQATEPECLIPLVLG KQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RL
Sbjct: 666  TQATEPECLIPLVLGAKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRL 725

Query: 2300 QVQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEIS 2479
            QVQYRMHP LSEFPSNSFYEGTLQNGVT+NERQS+GIDFPWPVPNRPMFFYVQMGQEEIS
Sbjct: 726  QVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEIS 785

Query: 2480 ASGTSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLY 2659
            ASGTSYLNRTEAANVEKIVTTFLRSGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLY
Sbjct: 786  ASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLY 845

Query: 2660 KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV 2839
            KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV
Sbjct: 846  KEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKV 905

Query: 2840 LSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDN 3016
            LSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL++GGGPGIV +DN
Sbjct: 906  LSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGGGPGIVSNDN 965

Query: 3017 IGYVGSSVP-LDKRGGRSKG 3073
             G   SS P  D+R  R +G
Sbjct: 966  FGSGASSSPNSDRRSSRGRG 985



 Score =  290 bits (742), Expect = 3e-75
 Identities = 142/242 (58%), Positives = 169/242 (69%), Gaps = 3/242 (1%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQPLTG-IGSVFNFPPLDNPSSQPSIG 3374
            A+P VP                    HL HQQS+Q   G +GS FNFP L+NP+SQPS+G
Sbjct: 1039 AVPHVPSPGSRGFGAGRGNAGAPIGSHLSHQQSTQQTIGNMGSTFNFPALENPNSQPSVG 1098

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G +  MPVQG SQ+FRDG S+G MSQ+FLGDDFKSQGSH+ YN+ADFSTQAS+S
Sbjct: 1099 GPLSQPGYVNNMPVQGPSQSFRDGFSVGGMSQDFLGDDFKSQGSHVPYNVADFSTQASQS 1158

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GYA+DY TQG Q G+PG++MNQN+Q G+S  G+G+D++ Q+YM HGSQGLFTQ GFND S
Sbjct: 1159 GYAVDYVTQGVQGGFPGNFMNQNSQAGFSRFGSGNDFMSQDYMTHGSQGLFTQIGFNDAS 1218

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNV--XXXXXXXXXXXNQSSANLKPHY 3908
            QD+ SQ+HFGIA P  LQSQGL+N LYSQPF HYN               Q S N K HY
Sbjct: 1219 QDDVSQNHFGIANPNPLQSQGLMNSLYSQPFAHYNTQPLNMQSTQQPQQGQGSQNQKIHY 1278

Query: 3909 NG 3914
            NG
Sbjct: 1279 NG 1280


>dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
            gi|222637078|gb|EEE67210.1| hypothetical protein
            OsJ_24327 [Oryza sativa Japonica Group]
          Length = 1277

 Score = 1682 bits (4355), Expect = 0.0
 Identities = 834/999 (83%), Positives = 887/999 (88%), Gaps = 21/999 (2%)
 Frame = +2

Query: 152  AAQSVNNLYETASQPD----TGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXX 319
            ++ +  +LYETASQPD      GDAYTFLEFNTQ D  +YP+F ELSQP+R         
Sbjct: 7    SSSAAADLYETASQPDPPASAAGDAYTFLEFNTQGDDFDYPDFPELSQPARSAPPTSAPG 66

Query: 320  XXXXXXXXXXXDLQ-----------ASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPA 466
                                     + +P L                 R +A  + +A A
Sbjct: 67   VPGSAGSPSPSSSSWPPPPPPPPDASQDPDLAPREATTPPASSSSPSPRASAKARASAAA 126

Query: 467  VDTLAAGMGALNFEE-----TGDEGYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKW 631
             D LA+G+ AL+FEE      G++GY++GKG+F EHAC+YCG+ NPACV RCN+P+CRKW
Sbjct: 127  ADGLASGVAALSFEEPLGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKW 186

Query: 632  FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTES 811
            FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA  E+
Sbjct: 187  FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAEN 246

Query: 812  VVVLLCREPCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQIN 991
            VVVLLCREPCL+VNALKDMNWDLSQWCPLIDDRCFL WLVKVPSEQEQLRARQISAQQIN
Sbjct: 247  VVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQIN 306

Query: 992  KLEELWKTNPDASLEDLEKPGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKES 1171
            K+EELWKTNPDASLEDLEKPGVDDEPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKES
Sbjct: 307  KVEELWKTNPDASLEDLEKPGVDDEPQQVALKYEDAYQYQNVFAPLIKLEADYDKMMKES 366

Query: 1172 QSKDNVSVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIK 1351
            QSKD+++VRWD+GLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGD++HPAWQSVGHVIK
Sbjct: 367  QSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGHVIK 426

Query: 1352 LTAQEEVALELRASQGVPVDLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHH 1531
            LTAQEEVALELRASQGVPVDL+HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHH
Sbjct: 427  LTAQEEVALELRASQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHH 486

Query: 1532 LLGHEVEQQIVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAA 1711
            LLGHEVE QI+RNTLPRRFGAPGLPELNASQV AVKSVLQKPISLIQGPPGTGKTVTSAA
Sbjct: 487  LLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPISLIQGPPGTGKTVTSAA 546

Query: 1712 IVYHMAKQGQGQVLVCAPSNVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQ 1891
            IVYHMAKQGQGQVLVCAPSNVAVDQLA+KISSTGLKVVRLCAKSREAV SPVEHLTLHYQ
Sbjct: 547  IVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQ 606

Query: 1892 VRHLDTSEKSELHKLQLLKDEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGD 2071
            VRHLDTSEKSELHKLQ LKDEQGELSSSDEKK+KALKRATEREILQSADVICCTCVGAGD
Sbjct: 607  VRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGD 666

Query: 2072 PRLDNFRFRQVLIDESTQATEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQ 2251
            PRL NFRFRQVLIDESTQATEPECLIPLVLGVKQV+LVGDHCQLGPVIMCKKAARAGLAQ
Sbjct: 667  PRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQ 726

Query: 2252 SLFERLVLLGHKPFRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVP 2431
            SLFERLV+LG KPFRLQVQYRMHPCLS+FPSN FYEGTLQNGVT+NERQ+ GIDFPWPVP
Sbjct: 727  SLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVP 786

Query: 2432 NRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAY 2611
            NRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV+PSQIGVITPYEGQRAY
Sbjct: 787  NRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAY 846

Query: 2612 IVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 2791
            IVNYMSRNG+LRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA
Sbjct: 847  IVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVA 906

Query: 2792 LTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS 2971
            LTRARYGIVILGNPKVLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY  
Sbjct: 907  LTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYND 966

Query: 2972 -RLYYGGGPGIVHSDNIGYVGSSVPLDKRGGRSKGHSYV 3085
             RL+ GGG G++   + G  G++   DKR GR KGHS+V
Sbjct: 967  RRLFLGGGQGVMQGASFGAAGTNPVADKRSGRGKGHSFV 1005



 Score =  287 bits (734), Expect = 3e-74
 Identities = 137/189 (72%), Positives = 159/189 (84%), Gaps = 1/189 (0%)
 Frame = +3

Query: 3276 HLPHQQSSQP-LTGIGSVFNFPPLDNPSSQPSIGAPASQTGLMTQMPVQGLSQTFRDGLS 3452
            HL HQQSSQ  + G+GS FNFP L+NPSSQPS G P SQTGLMTQMPVQGLSQTFRDG S
Sbjct: 1080 HLAHQQSSQQAMGGMGSAFNFPGLENPSSQPSGGGPMSQTGLMTQMPVQGLSQTFRDGFS 1139

Query: 3453 IGSMSQEFLGDDFKSQGSHITYNMADFSTQASRSGYALDYATQGPQAGYPGSYMNQNTQP 3632
            IG MSQ+F GDDFKSQGSH+ YN+ADFSTQAS+ GY +DY +QGPQ+GYPG+Y+NQN  P
Sbjct: 1140 IGGMSQDFFGDDFKSQGSHVAYNIADFSTQASQGGYGVDY-SQGPQSGYPGNYLNQNAHP 1198

Query: 3633 GYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPSQDESSQSHFGIAGPGSLQSQGLLNPL 3812
            GYSH+G  +D V Q++M HGS G+FTQAG+ND SQDESSQ HFG+AGPG LQSQ ++NPL
Sbjct: 1199 GYSHMGAANDIVSQDHMAHGSHGMFTQAGYNDSSQDESSQMHFGMAGPG-LQSQPMMNPL 1257

Query: 3813 YSQPFPHYN 3839
            YSQ + HYN
Sbjct: 1258 YSQSYAHYN 1266


>ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago truncatula]
            gi|355512759|gb|AES94382.1| Regulator of nonsense
            transcripts-like protein [Medicago truncatula]
          Length = 1253

 Score = 1681 bits (4353), Expect = 0.0
 Identities = 833/975 (85%), Positives = 883/975 (90%), Gaps = 2/975 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            NNL++TASQPDTG DAYTFLEFNTQ +  +YP+F++   P R                  
Sbjct: 6    NNLFDTASQPDTGTDAYTFLEFNTQGEDFDYPDFRD---PIRSPVAWPTPSDSLADPSGS 62

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPAVDTLAAGMGALNFEETGDE- 523
                  S+ +                 GR   G  + +  VD+LA+GM  LNFE+TGD+ 
Sbjct: 63   AGSDHHSDAS--------PVSAAPTKGGRSGGGSGSGSQMVDSLASGMSGLNFEDTGDDD 114

Query: 524  GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVRAKHKE 703
             YEFGKG+FTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVRAKHKE
Sbjct: 115  NYEFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKE 174

Query: 704  VCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDMNWDLS 883
            VCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDMNWDL+
Sbjct: 175  VCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLT 234

Query: 884  QWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEKPGVDD 1063
            QWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDAS EDLEKPGVDD
Sbjct: 235  QWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGVDD 294

Query: 1064 EPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRVAYFVF 1243
            EPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDN+++RWD+GLNKKRVAYFVF
Sbjct: 295  EPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNLTIRWDIGLNKKRVAYFVF 354

Query: 1244 PKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDLSHG 1423
            PKEDNELRLVPGDELRLRYSGD AHP+WQSVGHVIKLTAQEEVALELRASQGVPVD++HG
Sbjct: 355  PKEDNELRLVPGDELRLRYSGDAAHPSWQSVGHVIKLTAQEEVALELRASQGVPVDVNHG 414

Query: 1424 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRFGAPGL 1603
            FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRN LPRRFGAPGL
Sbjct: 415  FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPGL 474

Query: 1604 PELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 1783
            PELNASQV+AVKSVLQ+PISLIQGPPGTGKTVTSAA+VYHMAKQGQGQVLVCAPSNVAVD
Sbjct: 475  PELNASQVYAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVD 534

Query: 1784 QLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLKDEQGE 1963
            QLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTS+KSELHKLQ LKDEQGE
Sbjct: 535  QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGE 594

Query: 1964 LSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQATEPEC 2143
            LSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPEC
Sbjct: 595  LSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 654

Query: 2144 LIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQYRMHP 2323
            LIPLVLG KQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQYRMHP
Sbjct: 655  LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHP 714

Query: 2324 CLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 2503
            CLSEFPSNSFYEGTLQNGVT+NERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN
Sbjct: 715  CLSEFPSNSFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 774

Query: 2504 RTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 2683
            RTEAANVEKIVTTFL+SGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV
Sbjct: 775  RTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 834

Query: 2684 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 2863
            DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN
Sbjct: 835  DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 894

Query: 2864 GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGYVGSSV 3040
            GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL+YGGGPG+  +DN G  G+  
Sbjct: 895  GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGVAANDNFG-SGAGT 953

Query: 3041 PLDKRGGRSKGHSYV 3085
              D+R GR +G SY+
Sbjct: 954  SSDRRTGRGRG-SYI 967



 Score =  268 bits (684), Expect = 2e-68
 Identities = 132/241 (54%), Positives = 161/241 (66%), Gaps = 2/241 (0%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQPLTGIGSVFNFPPLDNPSSQPSIGA 3377
            A+P VP                    HLPHQ +  P   IGS FNFP L+NP+SQPS+G 
Sbjct: 1018 AVPHVPSPGSRGFGAGRGNSGASIGNHLPHQGTQPP---IGSAFNFPALENPNSQPSVGG 1074

Query: 3378 PASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRSG 3557
            P SQ G    MPVQG  Q+FRD  S+  MSQ+FLGDDFKSQGSH+ YN+ DFSTQAS+SG
Sbjct: 1075 PLSQPGFANNMPVQGAGQSFRDQFSVPGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQSG 1134

Query: 3558 YALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPSQ 3737
            YA+DYATQG Q G+PG+++NQN+Q GYS  G+G+D++ Q+YM HGSQGLFTQ GF+DP Q
Sbjct: 1135 YAVDYATQGAQGGFPGNFLNQNSQAGYSRFGSGNDFMSQDYMGHGSQGLFTQVGFSDPLQ 1194

Query: 3738 DESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNV--XXXXXXXXXXXNQSSANLKPHYN 3911
            D+++Q+HF +A    LQSQ  +N LYSQPF HYN               QSS N K HYN
Sbjct: 1195 DDATQNHFNVANSNPLQSQ--MNSLYSQPFAHYNTQPLNMQASQQQPQGQSSQNQKIHYN 1252

Query: 3912 G 3914
            G
Sbjct: 1253 G 1253


>gb|EMJ11627.1| hypothetical protein PRUPE_ppa000334mg [Prunus persica]
          Length = 1276

 Score = 1681 bits (4352), Expect = 0.0
 Identities = 838/977 (85%), Positives = 879/977 (89%), Gaps = 8/977 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQE-----LSQPSRXXXXXXXXXXXXX 331
            NNL+ETASQPDTG DAYTFLEFNTQ +  +YPEF++     ++ P+              
Sbjct: 6    NNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLSDPTDRDRG 65

Query: 332  XXXXXXXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPAVDTLAAGMGALNFEE 511
                       + P                  G G++GG      VD LA GM  LNFE+
Sbjct: 66   GGGVGSDHQSDASPVSAAPGSATKARAG----GSGSSGGNNQV--VDVLAGGMSVLNFED 119

Query: 512  TGDE-GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVR 688
            TGD+  YE+GKGNFTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVR
Sbjct: 120  TGDDDNYEYGKGNFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVR 179

Query: 689  AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDM 868
            AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDM
Sbjct: 180  AKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDM 239

Query: 869  NWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEK 1048
            NWDLSQWCPLIDDRCFL WLVKVPSEQEQLRARQISAQQINK+EELWKTNPDASLEDLEK
Sbjct: 240  NWDLSQWCPLIDDRCFLQWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEK 299

Query: 1049 PGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRV 1228
            PGVDDEPQPV LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV++RWD+GLNKKR+
Sbjct: 300  PGVDDEPQPVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRI 359

Query: 1229 AYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPV 1408
            AYFVFPKEDNELRLVPGDELRLRYSGD AHPAWQSVGHVIKLTAQEEVALELRASQGVPV
Sbjct: 360  AYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRASQGVPV 419

Query: 1409 DLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRF 1588
            D++HGFSVDFVWKSTSFDRMQGAMK FAVDETSVSGYIYHHLLGHEVE Q+VRNTLPRRF
Sbjct: 420  DVNHGFSVDFVWKSTSFDRMQGAMKAFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRF 479

Query: 1589 GAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 1768
            GAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS
Sbjct: 480  GAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPS 539

Query: 1769 NVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLK 1948
            NVAVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSEKSELHKLQ LK
Sbjct: 540  NVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLK 599

Query: 1949 DEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQA 2128
            DEQGELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQA
Sbjct: 600  DEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQA 659

Query: 2129 TEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQ 2308
            TEPECLIPLVLG KQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQ
Sbjct: 660  TEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQ 719

Query: 2309 YRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASG 2488
            YRMHP LSEFPSNSFYEGTLQNGVTINERQS+GIDFPWPVPNRPMFFYVQMGQEEISASG
Sbjct: 720  YRMHPALSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYVQMGQEEISASG 779

Query: 2489 TSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 2668
            TSYLNRTEAANVEKIVTTFLRSGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI
Sbjct: 780  TSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEI 839

Query: 2669 EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 2848
            EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK
Sbjct: 840  EVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 899

Query: 2849 QPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGY 3025
            QPLWN LLTHYKEHECLVEGPLNNLKQSMVQF KPKKIY   RL++GGGPG++ +D+ G 
Sbjct: 900  QPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFPKPKKIYNDRRLFFGGGPGVIPNDSYGS 959

Query: 3026 VGSS-VPLDKRGGRSKG 3073
            + SS    D+R  R +G
Sbjct: 960  IASSGQSADRRSTRGRG 976



 Score =  292 bits (747), Expect = 9e-76
 Identities = 144/248 (58%), Positives = 170/248 (68%), Gaps = 9/248 (3%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQPLTG-IGSVFNFPPLDNPSSQPSIG 3374
            A+P VPQ                   HLPHQQ +Q   G +GS FNFP L+NP+SQPS+G
Sbjct: 1030 AVPHVPQPGSRGFGAGRGNAGAPIGSHLPHQQGTQQNVGNLGSTFNFPALENPNSQPSVG 1089

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G +  MP QG SQTFRDG S+  MSQEFLGDDFKSQGSH+ YN+ADFSTQAS+S
Sbjct: 1090 GPLSQPGFVNNMP-QGPSQTFRDGFSMAGMSQEFLGDDFKSQGSHVPYNVADFSTQASQS 1148

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GYA+DY TQG Q G+PG++MNQN+Q GYS  GTG+D++ Q+YMPHGSQGLFTQ GFNDPS
Sbjct: 1149 GYAVDYVTQGAQGGFPGNFMNQNSQAGYSRFGTGNDFMSQDYMPHGSQGLFTQVGFNDPS 1208

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNV--------XXXXXXXXXXXNQSSA 3890
            QD++SQ+H+G+A    LQSQG +N LYSQPF HYN                     QSS 
Sbjct: 1209 QDDASQNHYGVANANQLQSQGFMNSLYSQPFAHYNTQPMNLQAPQQQQQQQPPQQGQSSQ 1268

Query: 3891 NLKPHYNG 3914
            N K HYNG
Sbjct: 1269 NQKIHYNG 1276


>ref|XP_004511759.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2
            [Cicer arietinum]
          Length = 1259

 Score = 1680 bits (4350), Expect = 0.0
 Identities = 834/975 (85%), Positives = 883/975 (90%), Gaps = 2/975 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            NNL++TASQPDTG DAYTFLEFNTQ +  +YPEF++  +                     
Sbjct: 6    NNLFDTASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGGA 65

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPAVDTLAAGMGALNFEETGDE- 523
              D Q+    +               KGR  +GG ++   VD+LAAGM  LNFE+TGD+ 
Sbjct: 66   VSDHQSDASPVSVTPGSAT-------KGRSGSGGGSSQ-MVDSLAAGMSGLNFEDTGDDD 117

Query: 524  GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVRAKHKE 703
             YE+GKG+FTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVRAKHKE
Sbjct: 118  NYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKE 177

Query: 704  VCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDMNWDLS 883
            VCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDMNWDLS
Sbjct: 178  VCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLS 237

Query: 884  QWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEKPGVDD 1063
            QWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDAS EDLEKPGVDD
Sbjct: 238  QWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGVDD 297

Query: 1064 EPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRVAYFVF 1243
            EPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV++RWD+GLNKKRVAYFVF
Sbjct: 298  EPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRVAYFVF 357

Query: 1244 PKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDLSHG 1423
            PKEDNELRLVPGDELRLRYSGD AHP+WQSVGHVIKLTAQEEVALELRASQGVPVD++HG
Sbjct: 358  PKEDNELRLVPGDELRLRYSGDAAHPSWQSVGHVIKLTAQEEVALELRASQGVPVDVNHG 417

Query: 1424 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRFGAPGL 1603
            FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRN LPRRFGA GL
Sbjct: 418  FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGALGL 477

Query: 1604 PELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 1783
            PELNASQVFAVKSVLQ+PISLIQGPPGTGKTVTSAA+VYHMAKQGQGQVLVCAPSNVAVD
Sbjct: 478  PELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVD 537

Query: 1784 QLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLKDEQGE 1963
            QLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTS+KSELHKLQ LKDEQGE
Sbjct: 538  QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGE 597

Query: 1964 LSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQATEPEC 2143
            LSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPEC
Sbjct: 598  LSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 657

Query: 2144 LIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQYRMHP 2323
            LIPLVLG KQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQYRMHP
Sbjct: 658  LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHP 717

Query: 2324 CLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 2503
            CLSEFPSNSFYEGTLQNGVT+NERQS+GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN
Sbjct: 718  CLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 777

Query: 2504 RTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 2683
            RTEAANVEKIVTTFL+SGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV
Sbjct: 778  RTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 837

Query: 2684 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 2863
            DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN
Sbjct: 838  DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 897

Query: 2864 GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGYVGSSV 3040
            GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL+YGGGPG+  +DN    G+  
Sbjct: 898  GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGVAANDNFS-PGAGT 956

Query: 3041 PLDKRGGRSKGHSYV 3085
              D+R  R +G SY+
Sbjct: 957  SSDRRNSRGRG-SYI 970



 Score =  267 bits (682), Expect = 3e-68
 Identities = 132/242 (54%), Positives = 166/242 (68%), Gaps = 3/242 (1%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQ-PLTGIGSVFNFPPLDNPSSQPSIG 3374
            A+P VP                    HLPHQQ +Q P+  +GS FNFP L+NP+SQPS+G
Sbjct: 1021 AVPHVPSPGSRGFGAGRGNSAAPIGNHLPHQQGTQQPIGNLGSTFNFPALENPNSQPSVG 1080

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G    +PVQG +Q+FRD  S+  MSQ+FLGDDFKSQGSH+ YN+ DFSTQAS+S
Sbjct: 1081 -PLSQPGFANNIPVQGSAQSFRDQFSVPGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQS 1139

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
            GYA+DYATQG Q+G+PG+++NQN+Q GYS  G+G+D++ Q+YM HGSQGLFTQ GF+DP 
Sbjct: 1140 GYAVDYATQGAQSGFPGNFLNQNSQAGYSRFGSGNDFMSQDYMGHGSQGLFTQVGFSDPL 1199

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNV--XXXXXXXXXXXNQSSANLKPHY 3908
            QD+++Q+HF +A    LQSQ  +N LYSQPF HYN               QSS N K HY
Sbjct: 1200 QDDATQNHFNVANANPLQSQ--MNSLYSQPFAHYNTQPLNMQASQQQPQGQSSQNQKIHY 1257

Query: 3909 NG 3914
            NG
Sbjct: 1258 NG 1259


>ref|XP_004511758.1| PREDICTED: regulator of nonsense transcripts 1 homolog isoform X1
            [Cicer arietinum]
          Length = 1261

 Score = 1680 bits (4350), Expect = 0.0
 Identities = 834/975 (85%), Positives = 883/975 (90%), Gaps = 2/975 (0%)
 Frame = +2

Query: 167  NNLYETASQPDTGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXXXXX 346
            NNL++TASQPDTG DAYTFLEFNTQ +  +YPEF++  +                     
Sbjct: 6    NNLFDTASQPDTGNDAYTFLEFNTQGEDFDYPEFRDPIRSPVAWPTPSDSLADPSERGGA 65

Query: 347  XXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPAVDTLAAGMGALNFEETGDE- 523
              D Q+    +               KGR  +GG ++   VD+LAAGM  LNFE+TGD+ 
Sbjct: 66   VSDHQSDASPVSVTPGSAT-------KGRSGSGGGSSQ-MVDSLAAGMSGLNFEDTGDDD 117

Query: 524  GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVNHLVRAKHKE 703
             YE+GKG+FTEHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNTSGSHIVNHLVRAKHKE
Sbjct: 118  NYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKE 177

Query: 704  VCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNALKDMNWDLS 883
            VCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCREPCL+VNALKDMNWDLS
Sbjct: 178  VCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLS 237

Query: 884  QWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLEDLEKPGVDD 1063
            QWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKTNPDAS EDLEKPGVDD
Sbjct: 238  QWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASFEDLEKPGVDD 297

Query: 1064 EPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLNKKRVAYFVF 1243
            EPQ V+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV++RWD+GLNKKRVAYFVF
Sbjct: 298  EPQSVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRVAYFVF 357

Query: 1244 PKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQGVPVDLSHG 1423
            PKEDNELRLVPGDELRLRYSGD AHP+WQSVGHVIKLTAQEEVALELRASQGVPVD++HG
Sbjct: 358  PKEDNELRLVPGDELRLRYSGDAAHPSWQSVGHVIKLTAQEEVALELRASQGVPVDVNHG 417

Query: 1424 FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTLPRRFGAPGL 1603
            FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE Q+VRN LPRRFGA GL
Sbjct: 418  FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGALGL 477

Query: 1604 PELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVD 1783
            PELNASQVFAVKSVLQ+PISLIQGPPGTGKTVTSAA+VYHMAKQGQGQVLVCAPSNVAVD
Sbjct: 478  PELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSNVAVD 537

Query: 1784 QLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKLQLLKDEQGE 1963
            QLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTS+KSELHKLQ LKDEQGE
Sbjct: 538  QLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSDKSELHKLQQLKDEQGE 597

Query: 1964 LSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDESTQATEPEC 2143
            LSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRFRQVLIDESTQATEPEC
Sbjct: 598  LSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPEC 657

Query: 2144 LIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFRLQVQYRMHP 2323
            LIPLVLG KQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLG KP RLQVQYRMHP
Sbjct: 658  LIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHP 717

Query: 2324 CLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 2503
            CLSEFPSNSFYEGTLQNGVT+NERQS+GIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN
Sbjct: 718  CLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLN 777

Query: 2504 RTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 2683
            RTEAANVEKIVTTFL+SGV+PSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV
Sbjct: 778  RTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASV 837

Query: 2684 DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 2863
            DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN
Sbjct: 838  DSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWN 897

Query: 2864 GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSDNIGYVGSSV 3040
            GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL+YGGGPG+  +DN    G+  
Sbjct: 898  GLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFYGGGPGVAANDNFS-PGAGT 956

Query: 3041 PLDKRGGRSKGHSYV 3085
              D+R  R +G SY+
Sbjct: 957  SSDRRNSRGRG-SYI 970



 Score =  123 bits (308), Expect = 7e-25
 Identities = 61/116 (52%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQ-PLTGIGSVFNFPPLDNPSSQPSIG 3374
            A+P VP                    HLPHQQ +Q P+  +GS FNFP L+NP+SQPS+G
Sbjct: 1021 AVPHVPSPGSRGFGAGRGNSAAPIGNHLPHQQGTQQPIGNLGSTFNFPALENPNSQPSVG 1080

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQ 3542
             P SQ G    +PVQG +Q+FRD  S+  MSQ+FLGDDFKSQGSH+ YN+ DFSTQ
Sbjct: 1081 -PLSQPGFANNIPVQGSAQSFRDQFSVPGMSQDFLGDDFKSQGSHVPYNVTDFSTQ 1135


>gb|EOY24106.1| Regulator of nonsense transcripts 1 [Theobroma cacao]
          Length = 1266

 Score = 1679 bits (4348), Expect = 0.0
 Identities = 845/988 (85%), Positives = 884/988 (89%), Gaps = 18/988 (1%)
 Frame = +2

Query: 164  VNNLYETASQPDTGGDAYTFLEFNTQDDFD-EYPEFQELSQ----PSRXXXXXXXXXXXX 328
            +++ +ETASQPD   DAYTFLEFNTQ + D EY +F++  +    PS             
Sbjct: 1    MDSQFETASQPDPATDAYTFLEFNTQGESDFEYTDFRDTIRSWPTPSDTTAADRSGSDHQ 60

Query: 329  XXXXXXXXDLQASEPALXXXXXXXXXXXXXXXKGRGAAGGQTT--------APAVDTLAA 484
                       AS+ A                 GRGA     +           VD LA 
Sbjct: 61   SDTAASSSPSSASKGA-----------------GRGATSNNNSNSNSISNSGAVVDALAT 103

Query: 485  GMGALNFEET-GDE--GYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNT 655
            G+  LNFEET GDE  GYE+GKG+F EHAC+YCGV NPACVVRCN+P+CRKWFCNSRGNT
Sbjct: 104  GISGLNFEETVGDEDGGYEYGKGDFAEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNT 163

Query: 656  SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCRE 835
            SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA TESVVVLLCRE
Sbjct: 164  SGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCRE 223

Query: 836  PCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKT 1015
            PCLNVNALKDMNWDLSQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINK+EELWKT
Sbjct: 224  PCLNVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKT 283

Query: 1016 NPDASLEDLEKPGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSV 1195
            NPDASLEDLEKPGVDDEPQPV+LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNV+V
Sbjct: 284  NPDASLEDLEKPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTV 343

Query: 1196 RWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVA 1375
            RWD+GLNKKR+AYFVFPKEDNELRLVPGDELRLRYSGD AHPAWQ+VGHVIKLTAQEEVA
Sbjct: 344  RWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQAVGHVIKLTAQEEVA 403

Query: 1376 LELRASQGVPVDLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQ 1555
            LELRASQGVPVD++HGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE 
Sbjct: 404  LELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEV 463

Query: 1556 QIVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQ 1735
            Q+VRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQ
Sbjct: 464  QMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQ 523

Query: 1736 GQGQVLVCAPSNVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSE 1915
            GQGQVLVCAPSNVAVDQLA+KIS+TGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSE
Sbjct: 524  GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE 583

Query: 1916 KSELHKLQLLKDEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRF 2095
            KSELHKLQ LKDEQGELSSSDEKK+KALKRATEREI QSADVICCTCVGAGDPRL NFRF
Sbjct: 584  KSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRF 643

Query: 2096 RQVLIDESTQATEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 2275
            RQVLIDESTQATEPECLIPLVLG KQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLVL
Sbjct: 644  RQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 703

Query: 2276 LGHKPFRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYV 2455
            LG KP RLQVQYRMHPCLSEFPSNSFYEGTLQNGVTINERQS+GIDFPWPVPNRPMFFYV
Sbjct: 704  LGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPMFFYV 763

Query: 2456 QMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRN 2635
            QMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGV+PSQIGVITPYEGQRAYIVNYMSRN
Sbjct: 764  QMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRN 823

Query: 2636 GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 2815
            GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI
Sbjct: 824  GALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 883

Query: 2816 VILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGG 2992
            VILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL++GGG
Sbjct: 884  VILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFFGGG 943

Query: 2993 PGIVHSDNIGYVGSSVP-LDKRGGRSKG 3073
            PGIV +DNIG   SS P  D+R  R++G
Sbjct: 944  PGIVPNDNIGSAASSSPNADRRSSRARG 971



 Score =  298 bits (762), Expect = 2e-77
 Identities = 147/244 (60%), Positives = 172/244 (70%), Gaps = 5/244 (2%)
 Frame = +3

Query: 3198 AIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQPLTG-IGSVFNFPPLDNPSSQPSIG 3374
            A+PQVPQ                   HLPHQQ +Q   G IGS FNFP L+NP+SQPS+G
Sbjct: 1024 AVPQVPQPGSRGFGAGRGNAGAPIGSHLPHQQGTQQNVGTIGSTFNFP-LENPNSQPSVG 1082

Query: 3375 APASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQASRS 3554
             P SQ G +  MPVQG SQTFRDG S+G MSQ+FLGDDFKSQGSH+ YN+ADFSTQAS+S
Sbjct: 1083 GPLSQPGFVNNMPVQGPSQTFRDGFSMGGMSQDFLGDDFKSQGSHVPYNVADFSTQASQS 1142

Query: 3555 GYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFNDPS 3734
             YA+DY TQG Q G+PG+++NQN+Q GYS  GTG+D++ Q+YM HGSQGLFTQ GFNDPS
Sbjct: 1143 AYAVDYVTQGAQGGFPGNFLNQNSQAGYSRFGTGNDFMSQDYMNHGSQGLFTQVGFNDPS 1202

Query: 3735 QDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYNV----XXXXXXXXXXXNQSSANLKP 3902
            QD++SQSHFG+A P  LQSQGL+N LYSQPF HYN                 Q S N K 
Sbjct: 1203 QDDASQSHFGVANPNQLQSQGLMNSLYSQPFAHYNTQPLNLQAPQQQQPQQGQGSQNQKL 1262

Query: 3903 HYNG 3914
            HYNG
Sbjct: 1263 HYNG 1266


>ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Brachypodium
            distachyon]
          Length = 1267

 Score = 1676 bits (4341), Expect = 0.0
 Identities = 833/984 (84%), Positives = 879/984 (89%), Gaps = 12/984 (1%)
 Frame = +2

Query: 170  NLYETASQPD----TGGDAYTFLEFNTQDDFDEYPEFQELSQPSRXXXXXXXXXXXXXXX 337
            +LYETASQPD      GDAYTFLEFNTQ D  EYP+F ELSQP+R               
Sbjct: 13   DLYETASQPDPSASAAGDAYTFLEFNTQGDDFEYPDFPELSQPARSAPPPATVTSSTSSS 72

Query: 338  XXXXXDLQ--ASEPALXXXXXXXXXXXXXXXKGRGAAGGQTTAPAVDTLAAGMGALNFEE 511
                      + +P L                   A+  + +A   D LAAG+ AL+FEE
Sbjct: 73   WPAPPPPPDASQDPDLVPQDSTPLASSSSPSPRSSASKARASAAVADGLAAGVAALSFEE 132

Query: 512  -----TGDEGYEFGKGNFTEHACKYCGVQNPACVVRCNIPTCRKWFCNSRGNTSGSHIVN 676
                  G++GY++GKG+F EHAC+YCG+ +PACV RCN+P+CRKWFCNSRGNTSGSH+VN
Sbjct: 133  PPGAGAGEDGYDYGKGDFVEHACRYCGIHSPACVARCNVPSCRKWFCNSRGNTSGSHLVN 192

Query: 677  HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISATTESVVVLLCREPCLNVNA 856
            HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA  E+VVVLLCREPCLNVNA
Sbjct: 193  HLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPCLNVNA 252

Query: 857  LKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKLEELWKTNPDASLE 1036
            LKDMNWDLSQW PLIDDRCFL WLVKVPSEQEQLRARQISAQQINK+EELWKTNPDASLE
Sbjct: 253  LKDMNWDLSQWLPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLE 312

Query: 1037 DLEKPGVDDEPQPVSLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVSVRWDVGLN 1216
            DLEKPGVDDEPQPV LKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKD+V+VRWD+GLN
Sbjct: 313  DLEKPGVDDEPQPVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDSVTVRWDIGLN 372

Query: 1217 KKRVAYFVFPKEDNELRLVPGDELRLRYSGDTAHPAWQSVGHVIKLTAQEEVALELRASQ 1396
            KKRVAYFVFPKEDNELRLVPGDELRLRYSG T+HPAWQSVGHVIKLTAQEEVALELRASQ
Sbjct: 373  KKRVAYFVFPKEDNELRLVPGDELRLRYSGGTSHPAWQSVGHVIKLTAQEEVALELRASQ 432

Query: 1397 GVPVDLSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEQQIVRNTL 1576
            GVPV+LSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE QI+RNTL
Sbjct: 433  GVPVELSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTL 492

Query: 1577 PRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLV 1756
            P+RFGAPGLPELNASQV AVKSVLQKP+SLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLV
Sbjct: 493  PKRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLV 552

Query: 1757 CAPSNVAVDQLADKISSTGLKVVRLCAKSREAVMSPVEHLTLHYQVRHLDTSEKSELHKL 1936
            CAPSNVAVDQLA+KISSTGLKVVRLCAKSREAV SPVEHLTLHYQVRHLDTSEKSE+HKL
Sbjct: 553  CAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEMHKL 612

Query: 1937 QLLKDEQGELSSSDEKKFKALKRATEREILQSADVICCTCVGAGDPRLDNFRFRQVLIDE 2116
            Q LKDEQGELSSSDEKK+KALKRATEREILQSADVICCTCVGAGDPRL NFRFRQVLIDE
Sbjct: 613  QQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDE 672

Query: 2117 STQATEPECLIPLVLGVKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGHKPFR 2296
            STQATEPECLIPLVLGVKQV+LVGDHCQLGPVIMCKKAARAGLAQSLFERLV+LG KPFR
Sbjct: 673  STQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFR 732

Query: 2297 LQVQYRMHPCLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 2476
            LQVQYRMHPCLSEFPSN FYEGTLQNGVT+NERQSTGIDFPWPVPNRPMFFYVQMG EEI
Sbjct: 733  LQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGVEEI 792

Query: 2477 SASGTSYLNRTEAANVEKIVTTFLRSGVIPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 2656
            SASGTSYLNRTEAANVEKIVTTFLRSGV+PSQIGVITPYEGQRAYIVNYMSRNG+LRQQL
Sbjct: 793  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQL 852

Query: 2657 YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 2836
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV+LGNPK
Sbjct: 853  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVVLGNPK 912

Query: 2837 VLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYGS-RLYYGGGPGIVHSD 3013
            VLSKQPLWN LLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY   RL+ GGG G++H  
Sbjct: 913  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFLGGGQGVMHGS 972

Query: 3014 NIGYVGSSVPLDKRGGRSKGHSYV 3085
            + G  GS   +DKR GR K H +V
Sbjct: 973  SFGTAGS---VDKRSGRGKAHPFV 993



 Score =  270 bits (691), Expect = 3e-69
 Identities = 128/217 (58%), Positives = 158/217 (72%), Gaps = 1/217 (0%)
 Frame = +3

Query: 3192 LXAIPQVPQXXXXXXXXXXXXXXXXXXXHLPHQQSSQPLTG-IGSVFNFPPLDNPSSQPS 3368
            + A+P VPQ                      HQQ+SQ   G +G  +NF  L+NPSSQPS
Sbjct: 1041 IGAVPAVPQPGNRNFGAPRANTGPIGGHLAAHQQNSQQAMGNVGPAYNFTGLENPSSQPS 1100

Query: 3369 IGAPASQTGLMTQMPVQGLSQTFRDGLSIGSMSQEFLGDDFKSQGSHITYNMADFSTQAS 3548
             G P SQ GLMTQMPVQGLSQTFRDG +IG MSQ+F GDDFKSQGSH+ YN+ADFSTQAS
Sbjct: 1101 GGGPMSQPGLMTQMPVQGLSQTFRDGFAIGGMSQDFFGDDFKSQGSHVAYNIADFSTQAS 1160

Query: 3549 RSGYALDYATQGPQAGYPGSYMNQNTQPGYSHLGTGHDYVFQEYMPHGSQGLFTQAGFND 3728
            + GY ++Y TQGPQ+GYPG+Y+NQ+  PGY H+G  ++ V Q++M HGS G+FTQAG+ND
Sbjct: 1161 QGGYGVEY-TQGPQSGYPGNYLNQSAHPGYPHMGATNEIVSQDHMAHGSHGMFTQAGYND 1219

Query: 3729 PSQDESSQSHFGIAGPGSLQSQGLLNPLYSQPFPHYN 3839
            PSQDESSQ H+G+  PG LQSQ ++NP+YSQ + HYN
Sbjct: 1220 PSQDESSQMHYGMGAPGHLQSQSMMNPMYSQSYAHYN 1256