BLASTX nr result
ID: Zingiber24_contig00052499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052499
(278 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 121 8e-26
gb|EOY34109.1| RNA-binding family protein [Theobroma cacao] 118 7e-25
ref|XP_003606654.1| THO complex subunit [Medicago truncatula] gi... 118 7e-25
ref|XP_002531375.1| RNA and export factor binding protein, putat... 118 7e-25
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera] 118 7e-25
ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer... 117 2e-24
ref|XP_006480780.1| PREDICTED: THO complex subunit 4-like isofor... 116 3e-24
ref|XP_006480779.1| PREDICTED: THO complex subunit 4-like isofor... 116 3e-24
ref|XP_006429036.1| hypothetical protein CICLE_v10012530mg [Citr... 116 3e-24
gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus pe... 116 3e-24
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor... 116 3e-24
gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus no... 116 4e-24
emb|CAG26903.1| ALY protein [Nicotiana benthamiana] 115 5e-24
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 115 6e-24
ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A... 114 1e-23
ref|XP_004294581.1| PREDICTED: THO complex subunit 4-A-like [Fra... 113 2e-23
ref|XP_004964685.1| PREDICTED: RNA and export factor-binding pro... 113 3e-23
ref|XP_004964684.1| PREDICTED: RNA and export factor-binding pro... 113 3e-23
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 112 5e-23
ref|XP_006398711.1| hypothetical protein EUTSA_v10014286mg [Eutr... 112 5e-23
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 121 bits (304), Expect = 8e-26
Identities = 64/92 (69%), Positives = 67/92 (72%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ SIHYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 104 KELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVG 163
Query: 182 TNIGAPGARXXXXXXXXXXXXXXXRSIHGRMG 277
TNI P A RS GR+G
Sbjct: 164 TNIATPAAVPPVTNGTFGNSNGGLRSAQGRVG 195
>gb|EOY34109.1| RNA-binding family protein [Theobroma cacao]
Length = 241
Score = 118 bits (296), Expect = 7e-25
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE F+EVGDLK+ +IHYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 103 KELFAEVGDLKRFTIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVG 162
Query: 182 TNIGAPGA 205
TN+ PGA
Sbjct: 163 TNVATPGA 170
>ref|XP_003606654.1| THO complex subunit [Medicago truncatula]
gi|355507709|gb|AES88851.1| THO complex subunit
[Medicago truncatula]
Length = 376
Score = 118 bits (296), Expect = 7e-25
Identities = 58/68 (85%), Positives = 61/68 (89%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ +HYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 224 KELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVG 283
Query: 182 TNIGAPGA 205
TNI PGA
Sbjct: 284 TNISTPGA 291
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 247
Score = 118 bits (296), Expect = 7e-25
Identities = 59/68 (86%), Positives = 61/68 (89%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ SIHYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 108 KELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVG 167
Query: 182 TNIGAPGA 205
TNI P A
Sbjct: 168 TNIATPAA 175
>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
Length = 281
Score = 118 bits (296), Expect = 7e-25
Identities = 59/68 (86%), Positives = 61/68 (89%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ SIHYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 104 KELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVG 163
Query: 182 TNIGAPGA 205
TNI P A
Sbjct: 164 TNIATPAA 171
>ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer arietinum]
Length = 257
Score = 117 bits (292), Expect = 2e-24
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ +HYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 105 KELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVG 164
Query: 182 TNIGAPG 202
TNI PG
Sbjct: 165 TNISTPG 171
>ref|XP_006480780.1| PREDICTED: THO complex subunit 4-like isoform X2 [Citrus sinensis]
Length = 256
Score = 116 bits (291), Expect = 3e-24
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVG+LK+CS+H+DRSGRSKGTAEVV +RR DA +AVKRYNNVQLDGKPMKIEI+G
Sbjct: 102 KELFSEVGELKRCSVHFDRSGRSKGTAEVVLTRRADAIAAVKRYNNVQLDGKPMKIEIIG 161
Query: 182 TNIGAPGA 205
TNIG P A
Sbjct: 162 TNIGPPAA 169
>ref|XP_006480779.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 287
Score = 116 bits (291), Expect = 3e-24
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVG+LK+CS+H+DRSGRSKGTAEVV +RR DA +AVKRYNNVQLDGKPMKIEI+G
Sbjct: 133 KELFSEVGELKRCSVHFDRSGRSKGTAEVVLTRRADAIAAVKRYNNVQLDGKPMKIEIIG 192
Query: 182 TNIGAPGA 205
TNIG P A
Sbjct: 193 TNIGPPAA 200
>ref|XP_006429036.1| hypothetical protein CICLE_v10012530mg [Citrus clementina]
gi|567872895|ref|XP_006429037.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
gi|567872897|ref|XP_006429038.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
gi|557531093|gb|ESR42276.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
gi|557531094|gb|ESR42277.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
gi|557531095|gb|ESR42278.1| hypothetical protein
CICLE_v10012530mg [Citrus clementina]
Length = 256
Score = 116 bits (291), Expect = 3e-24
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVG+LK+CS+H+DRSGRSKGTAEVV +RR DA +AVKRYNNVQLDGKPMKIEI+G
Sbjct: 102 KELFSEVGELKRCSVHFDRSGRSKGTAEVVLTRRADAIAAVKRYNNVQLDGKPMKIEIIG 161
Query: 182 TNIGAPGA 205
TNIG P A
Sbjct: 162 TNIGPPAA 169
>gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus persica]
Length = 252
Score = 116 bits (291), Expect = 3e-24
Identities = 57/67 (85%), Positives = 60/67 (89%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ +HYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 104 KELFSEVGDLKRYGVHYDRSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVG 163
Query: 182 TNIGAPG 202
TNI PG
Sbjct: 164 TNISTPG 170
>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 116 bits (291), Expect = 3e-24
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE F+EVGDLK+ ++HYDRSGRSKGTAEVVFSRR DA SAVKRYNNVQLDGKPMKIEIVG
Sbjct: 106 KELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVG 165
Query: 182 TNIGAPG 202
TNI PG
Sbjct: 166 TNISTPG 172
>gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus notabilis]
Length = 248
Score = 116 bits (290), Expect = 4e-24
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ +IHYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 105 KELFSEVGDLKRYAIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVG 164
Query: 182 TNIGAPGA 205
TN+ P A
Sbjct: 165 TNVATPAA 172
>emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
Length = 252
Score = 115 bits (289), Expect = 5e-24
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSE GDLK+ +IHYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 110 KELFSEAGDLKRYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVG 169
Query: 182 TNIGAPGA 205
TNI P A
Sbjct: 170 TNIATPAA 177
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 115 bits (288), Expect = 6e-24
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE F+EVGDLK+ ++HYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 106 KELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVG 165
Query: 182 TNIGAPG 202
TNI PG
Sbjct: 166 TNISTPG 172
>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
gi|548848813|gb|ERN07718.1| hypothetical protein
AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 114 bits (285), Expect = 1e-23
Identities = 57/66 (86%), Positives = 60/66 (90%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ SIHYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 111 KELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVG 170
Query: 182 TNIGAP 199
TN+ P
Sbjct: 171 TNLVTP 176
>ref|XP_004294581.1| PREDICTED: THO complex subunit 4-A-like [Fragaria vesca subsp.
vesca]
Length = 250
Score = 113 bits (283), Expect = 2e-23
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE F EVGDLK+ +HYDRSGRSKGTA+VVFSRR DA +AVKRYNNV LDGKPMKIEIVG
Sbjct: 105 KELFVEVGDLKRYGVHYDRSGRSKGTADVVFSRRQDAVAAVKRYNNVMLDGKPMKIEIVG 164
Query: 182 TNIGAPGA 205
TNI PGA
Sbjct: 165 TNISTPGA 172
>ref|XP_004964685.1| PREDICTED: RNA and export factor-binding protein 2-like isoform X2
[Setaria italica]
Length = 252
Score = 113 bits (282), Expect = 3e-23
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FS+VGD+K+ SI+YDRSGRSKGTAEVVFSRR+DA +AVKRYNNVQLDGKPMKIEI+G
Sbjct: 107 KELFSDVGDIKRYSINYDRSGRSKGTAEVVFSRRSDALAAVKRYNNVQLDGKPMKIEIIG 166
Query: 182 TNIGAP 199
TNI AP
Sbjct: 167 TNIEAP 172
>ref|XP_004964684.1| PREDICTED: RNA and export factor-binding protein 2-like isoform X1
[Setaria italica]
Length = 254
Score = 113 bits (282), Expect = 3e-23
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FS+VGD+K+ SI+YDRSGRSKGTAEVVFSRR+DA +AVKRYNNVQLDGKPMKIEI+G
Sbjct: 109 KELFSDVGDIKRYSINYDRSGRSKGTAEVVFSRRSDALAAVKRYNNVQLDGKPMKIEIIG 168
Query: 182 TNIGAP 199
TNI AP
Sbjct: 169 TNIEAP 174
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 112 bits (280), Expect = 5e-23
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ SIHYDRSGRSKGTAEVV+SRR DA +AVKRYNNVQLDGKPMKIEIVG
Sbjct: 104 KELFSEVGDLKRYSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVG 163
Query: 182 TNI 190
TNI
Sbjct: 164 TNI 166
>ref|XP_006398711.1| hypothetical protein EUTSA_v10014286mg [Eutrema salsugineum]
gi|557099801|gb|ESQ40164.1| hypothetical protein
EUTSA_v10014286mg [Eutrema salsugineum]
Length = 287
Score = 112 bits (280), Expect = 5e-23
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = +2
Query: 2 KERFSEVGDLKKCSIHYDRSGRSKGTAEVVFSRRNDASSAVKRYNNVQLDGKPMKIEIVG 181
KE FSEVGDLK+ IHYDRSGRSKGTAEVVFSRR DA +AVKRYNNVQLDGK MKIEIVG
Sbjct: 122 KELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGKLMKIEIVG 181
Query: 182 TNIGAP 199
TN+ AP
Sbjct: 182 TNLSAP 187