BLASTX nr result
ID: Zingiber24_contig00052486
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052486
(325 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308344.2| hypothetical protein POPTR_0006s21160g [Popu... 91 2e-16
ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus ... 86 5e-15
ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624... 84 2e-14
ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624... 84 2e-14
ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citr... 84 2e-14
ref|XP_006838801.1| hypothetical protein AMTR_s00002p00260810 [A... 82 6e-14
emb|CBI29964.3| unnamed protein product [Vitis vinifera] 81 1e-13
ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik... 81 1e-13
gb|EXB29323.1| DNA damage-binding protein 1b [Morus notabilis] 81 2e-13
gb|EMJ05498.1| hypothetical protein PRUPE_ppa000262mg [Prunus pe... 79 5e-13
gb|EOY09620.1| Cleavage and polyadenylation specificity factor (... 79 6e-13
gb|EOY09618.1| Cleavage and polyadenylation specificity factor (... 79 6e-13
ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227... 79 8e-13
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik... 79 8e-13
ref|XP_006604688.1| PREDICTED: uncharacterized protein LOC100799... 78 1e-12
ref|XP_006604687.1| PREDICTED: uncharacterized protein LOC100799... 78 1e-12
ref|XP_006604686.1| PREDICTED: uncharacterized protein LOC100799... 78 1e-12
gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thal... 77 2e-12
ref|NP_187802.2| Cleavage and polyadenylation specificity factor... 77 2e-12
ref|NP_850565.1| Cleavage and polyadenylation specificity factor... 77 2e-12
>ref|XP_002308344.2| hypothetical protein POPTR_0006s21160g [Populus trichocarpa]
gi|550336774|gb|EEE91867.2| hypothetical protein
POPTR_0006s21160g [Populus trichocarpa]
Length = 1397
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = -3
Query: 170 GVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
GVHYLAK VLRGSAVLHA+ GHFRS +S DIVFGKETS+ELA I EDGI+Q+I EQ
Sbjct: 30 GVHYLAKSVLRGSAVLHAIYGHFRSSFSYDIVFGKETSIELAIIGEDGIVQAICEQ 85
>ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
gi|223528782|gb|EEF30789.1| spliceosomal protein sap,
putative [Ricinus communis]
Length = 1220
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
HYLAKCVLRGS VL V GHFRSP S DIVFGKETS+EL I EDGI+QSI EQ
Sbjct: 26 HYLAKCVLRGSVVLQVVYGHFRSPSSNDIVFGKETSIELVIIGEDGILQSICEQ 79
>ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624787 isoform X3 [Citrus
sinensis]
Length = 1182
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = -3
Query: 173 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
R +HYLAKCVL+GS VL GH RSP S D+VFGKETS+EL I EDGI+QS+ EQ
Sbjct: 28 RNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQ 84
>ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624787 isoform X1 [Citrus
sinensis]
Length = 1394
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = -3
Query: 173 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
R +HYLAKCVL+GS VL GH RSP S D+VFGKETS+EL I EDGI+QS+ EQ
Sbjct: 28 RNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQ 84
>ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citrus clementina]
gi|557532011|gb|ESR43194.1| hypothetical protein
CICLE_v10011020mg [Citrus clementina]
Length = 926
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = -3
Query: 173 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
R +HYLAKCVL+GS VL GH RSP S D+VFGKETS+EL I EDGI+QS+ EQ
Sbjct: 28 RNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVVFGKETSIELVIIGEDGIVQSVCEQ 84
>ref|XP_006838801.1| hypothetical protein AMTR_s00002p00260810 [Amborella trichopoda]
gi|548841307|gb|ERN01370.1| hypothetical protein
AMTR_s00002p00260810 [Amborella trichopoda]
Length = 1396
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = -3
Query: 167 VHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
+HYLAKCVL+GS VL AV GH RSP S D++FGKETS+EL ++EDG++QS+ EQ
Sbjct: 20 LHYLAKCVLKGSVVLQAVHGHMRSPSSFDVIFGKETSIELVVVSEDGVVQSVCEQ 74
>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
HYLAKCVL+GS VLH V G RSP DIVFGKETSLEL I EDGI+QS+ EQ
Sbjct: 22 HYLAKCVLKGSVVLHVVHGRIRSPSFSDIVFGKETSLELVIIGEDGIVQSVCEQ 75
>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
Length = 1387
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
HYLAKCVL+GS VLH V G RSP DIVFGKETSLEL I EDGI+QS+ EQ
Sbjct: 22 HYLAKCVLKGSVVLHVVHGRIRSPSFSDIVFGKETSLELVIIGEDGIVQSVCEQ 75
>gb|EXB29323.1| DNA damage-binding protein 1b [Morus notabilis]
Length = 1388
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/54 (70%), Positives = 43/54 (79%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
HYLAKCVLRGS VLH V G RSP S D+VFGKETS+EL I EDGI+QS+ +Q
Sbjct: 26 HYLAKCVLRGSVVLHVVYGRIRSPTSFDVVFGKETSIELVVIGEDGIVQSVSDQ 79
>gb|EMJ05498.1| hypothetical protein PRUPE_ppa000262mg [Prunus persica]
Length = 1378
Score = 79.3 bits (194), Expect = 5e-13
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
HYLAKCVLRGS VL + GH R P S D+VFGKETS+EL I EDGI+QSI EQ
Sbjct: 25 HYLAKCVLRGSVVLQVLYGHIRFPTSYDVVFGKETSIELVIIGEDGIVQSICEQ 78
>gb|EOY09620.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 3 [Theobroma cacao]
Length = 1254
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = -3
Query: 173 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
+GV+YLAKCVLRGS VL GH RSP S D+VFGKETS+EL + EDGI+ SI EQ
Sbjct: 28 QGVNYLAKCVLRGSVVLQVAYGHLRSPSSFDVVFGKETSIELVIMGEDGIVTSICEQ 84
>gb|EOY09618.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 1 [Theobroma cacao]
Length = 1391
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = -3
Query: 173 RGVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
+GV+YLAKCVLRGS VL GH RSP S D+VFGKETS+EL + EDGI+ SI EQ
Sbjct: 28 QGVNYLAKCVLRGSVVLQVAYGHLRSPSSFDVVFGKETSIELVIMGEDGIVTSICEQ 84
>ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
sativus]
Length = 997
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
+YLAKCVLRGS VL + GH RSP S D+VFGKETS+EL I EDG++QS+ EQ
Sbjct: 24 YYLAKCVLRGSVVLQVLYGHIRSPSSLDVVFGKETSIELVVIGEDGVVQSVCEQ 77
>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
Length = 1376
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
+YLAKCVLRGS VL + GH RSP S D+VFGKETS+EL I EDG++QS+ EQ
Sbjct: 24 YYLAKCVLRGSVVLQVLYGHIRSPSSLDVVFGKETSIELVVIGEDGVVQSVCEQ 77
>ref|XP_006604688.1| PREDICTED: uncharacterized protein LOC100799711 isoform X3 [Glycine
max]
Length = 1368
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
+YL+KCV RGS VLH + H RSP S D+VFGKETS+EL I+EDG +QS+F+Q
Sbjct: 28 YYLSKCVFRGSVVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQ 81
>ref|XP_006604687.1| PREDICTED: uncharacterized protein LOC100799711 isoform X2 [Glycine
max]
Length = 1371
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
+YL+KCV RGS VLH + H RSP S D+VFGKETS+EL I+EDG +QS+F+Q
Sbjct: 28 YYLSKCVFRGSVVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQ 81
>ref|XP_006604686.1| PREDICTED: uncharacterized protein LOC100799711 isoform X1 [Glycine
max]
Length = 1373
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = -3
Query: 164 HYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
+YL+KCV RGS VLH + H RSP S D+VFGKETS+EL I+EDG +QS+F+Q
Sbjct: 28 YYLSKCVFRGSVVLHVLHAHIRSPSSNDVVFGKETSIELVVIDEDGNVQSVFDQ 81
>gb|AAF23212.1|AC016795_25 hypothetical protein [Arabidopsis thaliana]
gi|10998135|dbj|BAB03106.1| unnamed protein product
[Arabidopsis thaliana]
Length = 1331
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -3
Query: 170 GVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
G HYLAKC+LR S VL G+FRSP S+DIVFGKET +EL I EDGI++S+ EQ
Sbjct: 33 GDHYLAKCILRPSVVLQVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQ 88
>ref|NP_187802.2| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|29824376|gb|AAP04148.1| unknown protein [Arabidopsis
thaliana] gi|110739103|dbj|BAF01468.1| hypothetical
protein [Arabidopsis thaliana]
gi|332641608|gb|AEE75129.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein [Arabidopsis
thaliana]
Length = 1379
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -3
Query: 170 GVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
G HYLAKC+LR S VL G+FRSP S+DIVFGKET +EL I EDGI++S+ EQ
Sbjct: 33 GDHYLAKCILRPSVVLQVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQ 88
>ref|NP_850565.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein [Arabidopsis thaliana]
gi|332641609|gb|AEE75130.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein [Arabidopsis
thaliana]
Length = 1329
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = -3
Query: 170 GVHYLAKCVLRGSAVLHAVQGHFRSPYSKDIVFGKETSLELASINEDGIIQSIFEQ 3
G HYLAKC+LR S VL G+FRSP S+DIVFGKET +EL I EDGI++S+ EQ
Sbjct: 33 GDHYLAKCILRPSVVLQVAYGYFRSPSSRDIVFGKETCIELVVIGEDGIVESVCEQ 88