BLASTX nr result
ID: Zingiber24_contig00052463
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052463
(376 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10350.1| hypothetical protein [Arabidopsis thaliana] gi|7... 77 2e-12
ref|NP_193307.2| pentatricopeptide repeat-containing protein [Ar... 77 2e-12
ref|XP_002870213.1| pentatricopeptide repeat-containing protein ... 75 7e-12
ref|XP_006283356.1| hypothetical protein CARUB_v10004399mg [Caps... 73 3e-11
gb|EMJ26161.1| hypothetical protein PRUPE_ppa021143mg [Prunus pe... 72 6e-11
ref|XP_003609638.1| Pentatricopeptide repeat-containing protein ... 72 8e-11
ref|XP_004513068.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
emb|CBI26082.3| unnamed protein product [Vitis vinifera] 71 1e-10
ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
emb|CAN78051.1| hypothetical protein VITISV_015864 [Vitis vinifera] 71 1e-10
ref|XP_004295496.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
gb|EMT32719.1| hypothetical protein F775_17327 [Aegilops tauschii] 68 1e-09
ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_002516898.1| pentatricopeptide repeat-containing protein,... 68 1e-09
ref|XP_006489265.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_006419615.1| hypothetical protein CICLE_v10004576mg [Citr... 68 1e-09
ref|NP_001066232.1| Os12g0163600 [Oryza sativa Japonica Group] g... 68 1e-09
ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_002330363.1| predicted protein [Populus trichocarpa] gi|5... 68 1e-09
gb|EAY82368.1| hypothetical protein OsI_37580 [Oryza sativa Indi... 68 1e-09
>emb|CAB10350.1| hypothetical protein [Arabidopsis thaliana]
gi|7268320|emb|CAB78614.1| hypothetical protein
[Arabidopsis thaliana]
Length = 602
Score = 77.0 bits (188), Expect = 2e-12
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+S+IVEREIVVRD+NRFH F+NGSCTCRDYW
Sbjct: 566 HEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 602
>ref|NP_193307.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75161477|sp|Q8VYH0.1|PP313_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g15720 gi|18175616|gb|AAL59897.1| unknown protein
[Arabidopsis thaliana] gi|20465541|gb|AAM20253.1|
unknown protein [Arabidopsis thaliana]
gi|332658240|gb|AEE83640.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 616
Score = 77.0 bits (188), Expect = 2e-12
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+S+IVEREIVVRD+NRFH F+NGSCTCRDYW
Sbjct: 580 HEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
>ref|XP_002870213.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316049|gb|EFH46472.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 608
Score = 75.5 bits (184), Expect = 7e-12
Identities = 31/37 (83%), Positives = 36/37 (97%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+S+IVEREIVVRD+NRFH F+NGSCTCRD+W
Sbjct: 572 HEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDFW 608
>ref|XP_006283356.1| hypothetical protein CARUB_v10004399mg [Capsella rubella]
gi|482552061|gb|EOA16254.1| hypothetical protein
CARUB_v10004399mg [Capsella rubella]
Length = 612
Score = 73.2 bits (178), Expect = 3e-11
Identities = 29/37 (78%), Positives = 36/37 (97%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFK++S+IV+REIVVRD+NRFH F+NGSCTCRD+W
Sbjct: 576 HEAFKVISEIVQREIVVRDVNRFHCFKNGSCTCRDFW 612
>gb|EMJ26161.1| hypothetical protein PRUPE_ppa021143mg [Prunus persica]
Length = 602
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+SDIVERE VVRD+NRFH F++GSCTCRD+W
Sbjct: 566 HEAFKLISDIVERECVVRDVNRFHHFKSGSCTCRDFW 602
>ref|XP_003609638.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510693|gb|AES91835.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 589
Score = 72.0 bits (175), Expect = 8e-11
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+SDIVERE VVRD+NRFH F+NGSCTC D+W
Sbjct: 553 HEAFKLISDIVEREFVVRDVNRFHHFKNGSCTCGDFW 589
>ref|XP_004513068.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cicer arietinum]
Length = 605
Score = 71.6 bits (174), Expect = 1e-10
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFK++SDIVERE +VRDLNRFH F+NGSCTC D+W
Sbjct: 569 HEAFKVISDIVEREFIVRDLNRFHHFKNGSCTCGDFW 605
>emb|CBI26082.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 71.2 bits (173), Expect = 1e-10
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+S+IVER+ VVRD+NRFH F NGSCTCRD+W
Sbjct: 532 HEAFKLISEIVERDFVVRDVNRFHHFENGSCTCRDFW 568
>ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 71.2 bits (173), Expect = 1e-10
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+S+IVER+ VVRD+NRFH F NGSCTCRD+W
Sbjct: 570 HEAFKLISEIVERDFVVRDVNRFHHFENGSCTCRDFW 606
>emb|CAN78051.1| hypothetical protein VITISV_015864 [Vitis vinifera]
Length = 231
Score = 71.2 bits (173), Expect = 1e-10
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+S+IVER+ VVRD+NRFH F NGSCTCRD+W
Sbjct: 195 HEAFKLISEIVERDFVVRDVNRFHHFENGSCTCRDFW 231
>ref|XP_004295496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Fragaria vesca subsp. vesca]
Length = 583
Score = 69.3 bits (168), Expect = 5e-10
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+SDIV RE +VRD+NRFH F+ GSCTCRD+W
Sbjct: 547 HEAFKLISDIVGREFIVRDVNRFHHFKGGSCTCRDFW 583
>gb|EMT32719.1| hypothetical protein F775_17327 [Aegilops tauschii]
Length = 547
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
H+AFKL+SDI+ERE VVRDLNRFH F+ GSC+C DYW
Sbjct: 511 HDAFKLISDIMEREFVVRDLNRFHHFKLGSCSCNDYW 547
>ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 68.2 bits (165), Expect = 1e-09
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
H AFK +SDIV REI++RD+NRFH FR+G+C+CRDYW
Sbjct: 841 HAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
>ref|XP_002516898.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543986|gb|EEF45512.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 406
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+S IVER+ VVRD+NRFH F NGSC+CRD+W
Sbjct: 370 HEAFKLISGIVERDFVVRDINRFHHFDNGSCSCRDFW 406
>ref|XP_006489265.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Citrus sinensis]
Length = 605
Score = 67.8 bits (164), Expect = 1e-09
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
H+ FKL+SDIVER+ VVRD+NRFH FRNGSC+C D+W
Sbjct: 569 HDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
>ref|XP_006419615.1| hypothetical protein CICLE_v10004576mg [Citrus clementina]
gi|557521488|gb|ESR32855.1| hypothetical protein
CICLE_v10004576mg [Citrus clementina]
Length = 605
Score = 67.8 bits (164), Expect = 1e-09
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
H+ FKL+SDIVER+ VVRD+NRFH FRNGSC+C D+W
Sbjct: 569 HDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
>ref|NP_001066232.1| Os12g0163600 [Oryza sativa Japonica Group]
gi|77553071|gb|ABA95867.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113648739|dbj|BAF29251.1| Os12g0163600 [Oryza sativa
Japonica Group] gi|125578601|gb|EAZ19747.1| hypothetical
protein OsJ_35325 [Oryza sativa Japonica Group]
gi|215695280|dbj|BAG90471.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 604
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFK++S IVERE VVRDLNRFH FR GSC+C DYW
Sbjct: 568 HEAFKVISAIVEREFVVRDLNRFHHFRMGSCSCNDYW 604
>ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 67.8 bits (164), Expect = 1e-09
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
H AFKL+SDIVERE+VVRD+NRFH F+NG CTC D+W
Sbjct: 567 HGAFKLISDIVERELVVRDVNRFHHFKNGLCTCGDFW 603
>ref|XP_002330363.1| predicted protein [Populus trichocarpa]
gi|566185394|ref|XP_006380176.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550333697|gb|ERP57973.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 584
Score = 67.8 bits (164), Expect = 1e-09
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFKL+S IVER+ VVRD+NRFH F++GSCTC+D+W
Sbjct: 548 HEAFKLISKIVERDFVVRDVNRFHHFKDGSCTCKDFW 584
>gb|EAY82368.1| hypothetical protein OsI_37580 [Oryza sativa Indica Group]
Length = 604
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +1
Query: 1 HEAFKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 111
HEAFK++S IVERE VVRDLNRFH FR GSC+C DYW
Sbjct: 568 HEAFKVISAIVEREFVVRDLNRFHHFRMGSCSCNDYW 604