BLASTX nr result
ID: Zingiber24_contig00052457
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052457
(303 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group] g... 100 2e-19
gb|AAT44196.1| hypothetical protein, contains pentatricopeptide ... 100 2e-19
ref|XP_006655629.1| PREDICTED: putative pentatricopeptide repeat... 99 6e-19
ref|XP_003565843.1| PREDICTED: putative pentatricopeptide repeat... 99 8e-19
gb|AFW81247.1| putative pentatricopeptide repeat family protein ... 97 2e-18
ref|XP_004233908.1| PREDICTED: putative pentatricopeptide repeat... 92 9e-17
emb|CBI17483.3| unnamed protein product [Vitis vinifera] 92 9e-17
ref|XP_002440319.1| hypothetical protein SORBIDRAFT_09g029650 [S... 92 9e-17
ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat... 92 9e-17
emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera] 92 9e-17
ref|XP_006365050.1| PREDICTED: putative pentatricopeptide repeat... 91 2e-16
ref|XP_004289123.1| PREDICTED: putative pentatricopeptide repeat... 90 4e-16
gb|EMJ04070.1| hypothetical protein PRUPE_ppa015725mg [Prunus pe... 90 4e-16
gb|ESW19872.1| hypothetical protein PHAVU_006G162500g [Phaseolus... 88 1e-15
gb|ESW19871.1| hypothetical protein PHAVU_006G162500g [Phaseolus... 88 1e-15
gb|EPS69232.1| hypothetical protein M569_05536, partial [Genlise... 88 1e-15
gb|EXC35441.1| hypothetical protein L484_026747 [Morus notabilis] 87 2e-15
ref|XP_002310258.2| pentatricopeptide repeat-containing family p... 87 2e-15
ref|XP_006852367.1| hypothetical protein AMTR_s00049p00223290 [A... 87 3e-15
ref|XP_006466834.1| PREDICTED: putative pentatricopeptide repeat... 86 5e-15
>ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa
Japonica Group]
Length = 704
Score = 100 bits (250), Expect = 2e-19
Identities = 53/100 (53%), Positives = 69/100 (69%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
HA+ ++S ++ SVFVATAL D+Y+K G AL+VFDEMP +N VSWT+ V++L
Sbjct: 96 HAFAVRSSAVS-SVFVATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGR 154
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++M ASGV CDS+ YA AL ACADA LL+RGR
Sbjct: 155 RHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGR 194
>gb|AAT44196.1| hypothetical protein, contains pentatricopeptide (PPR) repeat
[Oryza sativa Japonica Group] gi|51854327|gb|AAU10708.1|
hypothetical protein [Oryza sativa Japonica Group]
Length = 634
Score = 100 bits (250), Expect = 2e-19
Identities = 53/100 (53%), Positives = 69/100 (69%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
HA+ ++S ++ SVFVATAL D+Y+K G AL+VFDEMP +N VSWT+ V++L
Sbjct: 45 HAFAVRSSAVS-SVFVATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGR 103
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++M ASGV CDS+ YA AL ACADA LL+RGR
Sbjct: 104 RHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGR 143
>ref|XP_006655629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Oryza brachyantha]
Length = 673
Score = 99.0 bits (245), Expect = 6e-19
Identities = 51/100 (51%), Positives = 67/100 (67%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
HA+ ++S ++ SVFVATAL D+Y+K G AL+VFDEMP +N VSWT+ +++L
Sbjct: 70 HAFAVRSSAVS-SVFVATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLIASLTRAGR 128
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F+DM SGV CDS+ YA AL AC DA LL+RGR
Sbjct: 129 RHDALRRFSDMRTSGVHCDSYAYAAALTACTDAGLLSRGR 168
>ref|XP_003565843.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Brachypodium distachyon]
Length = 728
Score = 98.6 bits (244), Expect = 8e-19
Identities = 58/103 (56%), Positives = 69/103 (66%), Gaps = 3/103 (2%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPF--RNAVSWTSAVSALXXX 176
HA+ ++S L+ SVFVATAL D Y+K G A AL+VFDEMP RN VSWT+ V+AL
Sbjct: 137 HAFAVRSSALS-SVFVATALADAYAKAGRLALALRVFDEMPAARRNVVSWTTLVAALSRA 195
Query: 177 XXXXXXXXXFADMWAS-GVPCDSHTYATALKACADARLLARGR 302
FA+M AS GV CDSH YA AL ACADA +L+RGR
Sbjct: 196 GRRHDALRAFAEMRASAGVACDSHAYAAALTACADAGMLSRGR 238
>gb|AFW81247.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 788
Score = 97.4 bits (241), Expect = 2e-18
Identities = 54/100 (54%), Positives = 64/100 (64%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
HA+ ++S L SVFV+TAL D Y+K G ALQV DEMP RN VSWT+ V++L
Sbjct: 77 HAFAVRSSSLP-SVFVSTALADAYAKAGRLDLALQVLDEMPSRNVVSWTTLVASLARAGR 135
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
FA+M ASGV CDSH + AL ACADA LL RGR
Sbjct: 136 RHDALRRFAEMRASGVACDSHACSAALTACADAGLLPRGR 175
>ref|XP_004233908.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Solanum lycopersicum]
Length = 705
Score = 91.7 bits (226), Expect = 9e-17
Identities = 45/100 (45%), Positives = 57/100 (57%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H Y++K+ SVFV ++L+DMY K G VFDEMP RN VSWT+ ++ L
Sbjct: 137 HGYSMKAN-FVSSVFVGSSLVDMYMKAGKVIEGCGVFDEMPLRNVVSWTAVITGLVRAGY 195
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++MW GV CDS+ YA LKACAD L GR
Sbjct: 196 NEEGLVYFSEMWRDGVECDSYAYAIVLKACADIGCLNYGR 235
>emb|CBI17483.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/100 (48%), Positives = 61/100 (61%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H Y +K+G L SVFV +ALLDMY+K G +VF EMP RN VSWT+ ++ L
Sbjct: 146 HGYAVKTG-LVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGY 204
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++MW S V DS+T+A ALKACAD+ L GR
Sbjct: 205 NKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 244
>ref|XP_002440319.1| hypothetical protein SORBIDRAFT_09g029650 [Sorghum bicolor]
gi|241945604|gb|EES18749.1| hypothetical protein
SORBIDRAFT_09g029650 [Sorghum bicolor]
Length = 671
Score = 91.7 bits (226), Expect = 9e-17
Identities = 51/100 (51%), Positives = 62/100 (62%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
HA+ + S ++ SVFV+TAL D Y+K G ALQV DE P +N VSWT+ V++L
Sbjct: 84 HAFAVHSSAVS-SVFVSTALADAYAKAGSLELALQVLDETPCKNVVSWTTLVASLARGGR 142
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
FA+M ASGV CDSH A AL ACA A L ARGR
Sbjct: 143 RHDALRRFAEMRASGVDCDSHACAAALTACAGAGLRARGR 182
>ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/100 (48%), Positives = 61/100 (61%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H Y +K+G L SVFV +ALLDMY+K G +VF EMP RN VSWT+ ++ L
Sbjct: 139 HGYAVKTG-LVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGY 197
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++MW S V DS+T+A ALKACAD+ L GR
Sbjct: 198 NKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
>emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/100 (48%), Positives = 61/100 (61%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H Y +K+G L SVFV +ALLDMY+K G +VF EMP RN VSWT+ ++ L
Sbjct: 139 HGYAVKTG-LVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGY 197
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++MW S V DS+T+A ALKACAD+ L GR
Sbjct: 198 NKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
>ref|XP_006365050.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Solanum tuberosum]
Length = 705
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/100 (45%), Positives = 58/100 (58%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H Y++K+ + SVFV ++L+DMY K G VFDEMP RN VSWT+ ++ L
Sbjct: 137 HGYSMKANFVC-SVFVGSSLVDMYMKAGKVLEGCGVFDEMPLRNVVSWTAVITGLVRAGY 195
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++MW GV CDS+ YA LKACAD L GR
Sbjct: 196 NEEGLVYFSEMWRDGVECDSYAYAIVLKACADIGCLNYGR 235
>ref|XP_004289123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Fragaria vesca subsp. vesca]
Length = 696
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/100 (45%), Positives = 59/100 (59%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H Y++KSG + SVFV +AL+DMY K G+ VFDEMP RN VSWT+ ++ L
Sbjct: 139 HGYSVKSG-VVNSVFVGSALVDMYMKVGEIEKGCGVFDEMPLRNVVSWTTVITGLVRAGY 197
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
FA+MW V CD++ +A +LKACA L GR
Sbjct: 198 NVEGLVCFAEMWRCRVQCDAYAFAISLKACAGLGALKCGR 237
>gb|EMJ04070.1| hypothetical protein PRUPE_ppa015725mg [Prunus persica]
Length = 663
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/100 (46%), Positives = 59/100 (59%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H YT+KSG SVFV +ALLDMY K G +VFD+MP RN VSWT+ ++ L
Sbjct: 91 HGYTIKSG-FVNSVFVGSALLDMYMKIGKIEEGCRVFDQMPIRNVVSWTTIITGLVRAGY 149
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++MW S V D++ +A +LKACAD L GR
Sbjct: 150 NVEGLEYFSEMWRSKVQYDAYAFAISLKACADLGALNYGR 189
>gb|ESW19872.1| hypothetical protein PHAVU_006G162500g [Phaseolus vulgaris]
Length = 663
Score = 88.2 bits (217), Expect = 1e-15
Identities = 45/100 (45%), Positives = 63/100 (63%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H +++KSG L SVFV++AL+DMY K G +VF++M F+N VSWT+ +S L
Sbjct: 91 HGFSVKSG-LINSVFVSSALIDMYMKVGKIEQGCRVFEKMMFKNVVSWTAIISGLVHAGY 149
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++MW S V DSHT++ ALKA AD+ LL G+
Sbjct: 150 NMEGLLYFSEMWRSKVGYDSHTFSIALKASADSSLLHHGK 189
>gb|ESW19871.1| hypothetical protein PHAVU_006G162500g [Phaseolus vulgaris]
Length = 717
Score = 88.2 bits (217), Expect = 1e-15
Identities = 45/100 (45%), Positives = 63/100 (63%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H +++KSG L SVFV++AL+DMY K G +VF++M F+N VSWT+ +S L
Sbjct: 145 HGFSVKSG-LINSVFVSSALIDMYMKVGKIEQGCRVFEKMMFKNVVSWTAIISGLVHAGY 203
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++MW S V DSHT++ ALKA AD+ LL G+
Sbjct: 204 NMEGLLYFSEMWRSKVGYDSHTFSIALKASADSSLLHHGK 243
>gb|EPS69232.1| hypothetical protein M569_05536, partial [Genlisea aurea]
Length = 649
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H Y LK+G SVFVA+A +DMY K G + +FDEMP RN VSWT+ ++ L
Sbjct: 92 HGYCLKTG-FVNSVFVASATVDMYMKAGRVSEGCMLFDEMPLRNVVSWTAIITGLVHAGL 150
Query: 183 XXXXXXXFADMWA-SGVPCDSHTYATALKACADARLLARGR 302
F MW+ GV DS+T+A ALKACAD L G+
Sbjct: 151 NSRALVYFRSMWSDDGVEHDSYTFAVALKACADMEFLKNGK 191
>gb|EXC35441.1| hypothetical protein L484_026747 [Morus notabilis]
Length = 711
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/100 (46%), Positives = 57/100 (57%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H ++KSG L SVFV + LLDMY+K G +VFD MP RN VSWT+ +S L
Sbjct: 139 HGCSIKSG-LVNSVFVGSTLLDMYAKMGKIELGCRVFDHMPDRNIVSWTAIISGLVHAGY 197
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F+ MW V CD++ YA ALKACAD L G+
Sbjct: 198 NAQGLFYFSKMWKLKVECDAYAYAIALKACADLSALIHGK 237
>ref|XP_002310258.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550334781|gb|EEE90708.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 666
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/100 (44%), Positives = 59/100 (59%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H Y++K+ SVFV +AL+DMY K G VF EMP RN VSWT+ ++ L
Sbjct: 91 HGYSVKTD-FVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGY 149
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F+DMW V CD++T+++ALKACAD+ L GR
Sbjct: 150 NKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGR 189
>ref|XP_006852367.1| hypothetical protein AMTR_s00049p00223290 [Amborella trichopoda]
gi|548855971|gb|ERN13834.1| hypothetical protein
AMTR_s00049p00223290 [Amborella trichopoda]
Length = 326
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/100 (45%), Positives = 61/100 (61%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H +++K+G VFV +A+LDMY+KTG + + VF EMP RN VSWT+ ++ L
Sbjct: 99 HGFSVKTG-FVNCVFVGSAILDMYTKTGCISKSRDVFHEMPQRNVVSWTAMMTGLVNSGH 157
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F+ MWAS + DS T+ATALKACAD L G+
Sbjct: 158 AKEALLYFSKMWASKIDVDSFTFATALKACADIDALLIGK 197
>ref|XP_006466834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Citrus sinensis]
Length = 714
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/100 (46%), Positives = 59/100 (59%)
Frame = +3
Query: 3 HAYTLKSGRLAGSVFVATALLDMYSKTGDPASALQVFDEMPFRNAVSWTSAVSALXXXXX 182
H YT+K+G SVFV +ALLDMY+K G +VFDEMP RN VSWT+ ++ L
Sbjct: 143 HGYTVKTG-FVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGY 201
Query: 183 XXXXXXXFADMWASGVPCDSHTYATALKACADARLLARGR 302
F++MW S DS+T+A LKA AD+ L GR
Sbjct: 202 NKEGLIYFSEMWRSKEQGDSYTFAIVLKASADSGALNFGR 241