BLASTX nr result
ID: Zingiber24_contig00052389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052389
(295 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299703.1| hypothetical protein POPTR_0001s18290g [Popu... 83 3e-14
ref|XP_006465604.1| PREDICTED: probable ATP-dependent RNA helica... 81 2e-13
ref|XP_006465603.1| PREDICTED: probable ATP-dependent RNA helica... 81 2e-13
ref|XP_006426972.1| hypothetical protein CICLE_v10024822mg [Citr... 81 2e-13
ref|XP_004960633.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP... 77 2e-12
emb|CBI36138.3| unnamed protein product [Vitis vinifera] 75 1e-11
ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helica... 75 1e-11
emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera] 75 1e-11
gb|EOY26786.1| RAD3-like DNA-binding helicase protein isoform 2 ... 74 2e-11
gb|EOY26785.1| RAD3-like DNA-binding helicase protein isoform 1 ... 74 2e-11
ref|XP_004506847.1| PREDICTED: probable ATP-dependent RNA helica... 74 2e-11
ref|XP_004506846.1| PREDICTED: probable ATP-dependent RNA helica... 74 2e-11
ref|XP_006582830.1| PREDICTED: uncharacterized protein LOC100305... 72 6e-11
ref|XP_002439462.1| hypothetical protein SORBIDRAFT_09g007185 [S... 72 1e-10
ref|XP_006655104.1| PREDICTED: probable ATP-dependent RNA helica... 70 3e-10
gb|EMJ17255.1| hypothetical protein PRUPE_ppa017676mg [Prunus pe... 70 3e-10
gb|EEE62776.1| hypothetical protein OsJ_17579 [Oryza sativa Japo... 70 3e-10
gb|EAY97002.1| hypothetical protein OsI_18924 [Oryza sativa Indi... 70 3e-10
dbj|BAG95734.1| unnamed protein product [Oryza sativa Japonica G... 70 3e-10
gb|AAT07552.1| unknown protein [Oryza sativa Japonica Group] 70 3e-10
>ref|XP_002299703.1| hypothetical protein POPTR_0001s18290g [Populus trichocarpa]
gi|222846961|gb|EEE84508.1| hypothetical protein
POPTR_0001s18290g [Populus trichocarpa]
Length = 918
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD RYA + SHPTNKLPLWIK RLVS+T NYGEVHRLLH+FF++N+++
Sbjct: 862 LVDMRYASDSSKTSFSHPTNKLPLWIKDRLVSATNNYGEVHRLLHQFFKYNKKR 915
>ref|XP_006465604.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform
X2 [Citrus sinensis]
Length = 848
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD RYA ++ SHP NKLP WIK RLVSST NYGEVHRLLH+FF+FN+ +
Sbjct: 792 LVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFKFNKNR 845
>ref|XP_006465603.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform X1
[Citrus sinensis]
Length = 930
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD RYA ++ SHP NKLP WIK RLVSST NYGEVHRLLH+FF+FN+ +
Sbjct: 874 LVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFKFNKNR 927
>ref|XP_006426972.1| hypothetical protein CICLE_v10024822mg [Citrus clementina]
gi|557528962|gb|ESR40212.1| hypothetical protein
CICLE_v10024822mg [Citrus clementina]
Length = 928
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD RYA ++ SHP NKLP WIK RLVSST NYGEVHRLLH+FF+FN+ +
Sbjct: 870 LVDLRYASESSKRSCSHPANKLPRWIKDRLVSSTNNYGEVHRLLHQFFKFNKNR 923
>ref|XP_004960633.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX11-like [Setaria italica]
Length = 865
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/55 (69%), Positives = 45/55 (81%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQKR 129
LVDSRYA + S++ S PT+KLP WIK RL S QNYGEVHRLLH+FF+FN+QKR
Sbjct: 812 LVDSRYAQASSSKSFSCPTDKLPQWIKARL-SCAQNYGEVHRLLHQFFKFNKQKR 865
>emb|CBI36138.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD+RYA L ++ SHPTNKLP WIK LV T YGE HRLLH+FF+FN+++
Sbjct: 770 LVDARYASDPLKRSFSHPTNKLPQWIKDCLVPVTGKYGEAHRLLHQFFKFNKKR 823
>ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Vitis
vinifera]
Length = 961
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD+RYA L ++ SHPTNKLP WIK LV T YGE HRLLH+FF+FN+++
Sbjct: 905 LVDARYASDPLKRSFSHPTNKLPQWIKDCLVPVTGKYGEAHRLLHQFFKFNKKR 958
>emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
Length = 914
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD+RYA L ++ SHPTNKLP WIK LV T YGE HRLLH+FF+FN+++
Sbjct: 858 LVDARYASDPLKRSFSHPTNKLPQWIKDCLVPVTGKYGEAHRLLHQFFKFNKKR 911
>gb|EOY26786.1| RAD3-like DNA-binding helicase protein isoform 2 [Theobroma cacao]
Length = 873
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD RYA ++ SHP++KLP WIK RLVS+T NYGEVH+LLH FF+ N+ +
Sbjct: 817 LVDIRYASDSSKRSFSHPSSKLPQWIKDRLVSATNNYGEVHKLLHHFFKLNKNR 870
>gb|EOY26785.1| RAD3-like DNA-binding helicase protein isoform 1 [Theobroma cacao]
Length = 912
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD RYA ++ SHP++KLP WIK RLVS+T NYGEVH+LLH FF+ N+ +
Sbjct: 856 LVDIRYASDSSKRSFSHPSSKLPQWIKDRLVSATNNYGEVHKLLHHFFKLNKNR 909
>ref|XP_004506847.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform X2
[Cicer arietinum]
Length = 914
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNR 138
LVD+RYA ++ +HPT KLP WIK RLVSS++NYGEVHRLLH+FF+ +
Sbjct: 859 LVDTRYASDSSKRSFNHPTTKLPNWIKDRLVSSSKNYGEVHRLLHQFFKLKK 910
>ref|XP_004506846.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like isoform X1
[Cicer arietinum]
Length = 1136
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/52 (61%), Positives = 41/52 (78%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNR 138
LVD+RYA ++ +HPT KLP WIK RLVSS++NYGEVHRLLH+FF+ +
Sbjct: 854 LVDTRYASDSSKRSFNHPTTKLPNWIKDRLVSSSKNYGEVHRLLHQFFKLKK 905
>ref|XP_006582830.1| PREDICTED: uncharacterized protein LOC100305733 isoform X1 [Glycine
max]
Length = 1145
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQKRH 126
LVD+RYA ++ SHP KLP WIK R VSST NYGEVHRLLH+FF+ + H
Sbjct: 857 LVDTRYASDSSKRSFSHPVTKLPQWIKDRFVSSTINYGEVHRLLHQFFKLKKTCCH 912
>ref|XP_002439462.1| hypothetical protein SORBIDRAFT_09g007185 [Sorghum bicolor]
gi|241944747|gb|EES17892.1| hypothetical protein
SORBIDRAFT_09g007185 [Sorghum bicolor]
Length = 590
Score = 71.6 bits (174), Expect = 1e-10
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQ 135
LVDSRYA + ++N S PT+KLP WIK RL S QNYGEVHR LH+FF+FN+Q
Sbjct: 539 LVDSRYAQTSSTKNFSCPTDKLPQWIKARL-SCAQNYGEVHRSLHQFFKFNKQ 590
>ref|XP_006655104.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Oryza
brachyantha]
Length = 846
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQ 135
LVDSRYA + ++N S PT+KLP WIK RL + QNYGEVHRLLH+FF+ N+Q
Sbjct: 793 LVDSRYAHNSSNKNSSCPTDKLPQWIKTRL-TRAQNYGEVHRLLHQFFKLNKQ 844
>gb|EMJ17255.1| hypothetical protein PRUPE_ppa017676mg [Prunus persica]
Length = 925
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQK 132
LVD+RYA +N HPT+KLP WIK R V+ST +YGEVHR+LH+FF+ N+++
Sbjct: 869 LVDTRYASDSSKRNFCHPTSKLPQWIKDRFVAST-DYGEVHRMLHQFFKHNKKR 921
>gb|EEE62776.1| hypothetical protein OsJ_17579 [Oryza sativa Japonica Group]
Length = 774
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQ 135
LVDSRYA + +++ S PT+KLP WIK RL + QNYGEVHRLLH+FF+ NRQ
Sbjct: 721 LVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACA-QNYGEVHRLLHQFFKLNRQ 772
>gb|EAY97002.1| hypothetical protein OsI_18924 [Oryza sativa Indica Group]
Length = 877
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQ 135
LVDSRYA + +++ S PT+KLP WIK RL + QNYGEVHRLLH+FF+ NRQ
Sbjct: 824 LVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACA-QNYGEVHRLLHQFFKLNRQ 875
>dbj|BAG95734.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 596
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQ 135
LVDSRYA + +++ S PT+KLP WIK RL + QNYGEVHRLLH+FF+ NRQ
Sbjct: 543 LVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACA-QNYGEVHRLLHQFFKLNRQ 594
>gb|AAT07552.1| unknown protein [Oryza sativa Japonica Group]
Length = 845
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -3
Query: 293 LVDSRYACSQLSQNMSHPTNKLPLWIKQRLVSSTQNYGEVHRLLHKFFQFNRQ 135
LVDSRYA + +++ S PT+KLP WIK RL + QNYGEVHRLLH+FF+ NRQ
Sbjct: 792 LVDSRYAHTSSNRSSSSPTDKLPQWIKTRLACA-QNYGEVHRLLHQFFKLNRQ 843