BLASTX nr result
ID: Zingiber24_contig00052377
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052377
(253 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABE77204.1| unknown [Sorghum bicolor] 115 6e-24
tpg|DAA43243.1| TPA: hypothetical protein ZEAMMB73_488594 [Zea m... 115 8e-24
ref|XP_004985793.1| PREDICTED: pentatricopeptide repeat-containi... 113 3e-23
ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indi... 108 1e-21
gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sat... 108 1e-21
ref|XP_006649360.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare] 101 1e-19
ref|XP_006412144.1| hypothetical protein EUTSA_v10024444mg [Eutr... 100 3e-19
gb|EMT16230.1| hypothetical protein F775_06704 [Aegilops tauschii] 99 8e-19
gb|EMS63566.1| hypothetical protein TRIUR3_03361 [Triticum urartu] 99 8e-19
gb|EMJ00196.1| hypothetical protein PRUPE_ppa002025mg [Prunus pe... 96 4e-18
ref|NP_195239.1| pentatricopeptide repeat-containing protein [Ar... 92 9e-17
ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Popu... 90 3e-16
ref|XP_002867090.1| pentatricopeptide repeat-containing protein ... 90 4e-16
ref|XP_002521253.1| pentatricopeptide repeat-containing protein,... 89 5e-16
ref|XP_004290750.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|EXB24037.1| hypothetical protein L484_006069 [Morus notabilis] 87 2e-15
ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
ref|XP_006486706.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
>gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 115 bits (288), Expect = 6e-24
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AEYAA +IFQLEH NTGCY++LSSMYADAG+ ED ER+ SLMK++GL +T RSLVEL
Sbjct: 611 IAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELN 670
Query: 183 RRTYSFINGDRLHAQSSRIHEVS 251
+ SF+NGD H QS +IHE S
Sbjct: 671 NKECSFVNGDMSHPQSEKIHEFS 693
>tpg|DAA43243.1| TPA: hypothetical protein ZEAMMB73_488594 [Zea mays]
Length = 484
Score = 115 bits (287), Expect = 8e-24
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AEYAA +IFQLEH NTGCY++LSSMYADAG+ ED ER+ SLMK++GL +T RSLVEL
Sbjct: 300 IAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELN 359
Query: 183 RRTYSFINGDRLHAQSSRIHEVS 251
SF+NGD H QS +IHE+S
Sbjct: 360 AEECSFVNGDMSHPQSEKIHELS 382
>ref|XP_004985793.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Setaria italica]
Length = 791
Score = 113 bits (282), Expect = 3e-23
Identities = 53/83 (63%), Positives = 66/83 (79%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AEYAA +IFQLEH NTGCY++LSSMYADAG+ ED ER+ SLMK++G ++T RSLVEL
Sbjct: 607 IAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGFQRTEARSLVELH 666
Query: 183 RRTYSFINGDRLHAQSSRIHEVS 251
+ SF+NGD H QS IHE+S
Sbjct: 667 DKECSFVNGDMSHPQSEEIHELS 689
>ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 108 bits (269), Expect = 1e-21
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AEYAA +IF+LEH+NTGCY++LSSMYADAG+ ED +R+ S M ++GL +T RS+VEL
Sbjct: 599 IAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELH 658
Query: 183 RRTYSFINGDRLHAQSSRIHEVS 251
+ SF+NGD H QS IHEVS
Sbjct: 659 GSSCSFVNGDMTHPQSKTIHEVS 681
>gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 108 bits (269), Expect = 1e-21
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AEYAA +IFQLEH+NTGCYI+LSSMYADAG+ ED ER+ LMK++GL +T SLVEL
Sbjct: 598 IAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELH 657
Query: 183 RRTYSFINGDRLHAQSSRIHEVS 251
SF NGD H+QS IHEVS
Sbjct: 658 STACSFANGDMSHSQSRTIHEVS 680
>gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group] gi|125584837|gb|EAZ25501.1| hypothetical protein
OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 108 bits (269), Expect = 1e-21
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AEYAA +IFQLEH+NTGCYI+LSSMYADAG+ ED ER+ LMK++GL +T SLVEL
Sbjct: 598 IAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELH 657
Query: 183 RRTYSFINGDRLHAQSSRIHEVS 251
SF NGD H+QS IHEVS
Sbjct: 658 STACSFANGDMSHSQSRTIHEVS 680
>ref|XP_006649360.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Oryza brachyantha]
Length = 787
Score = 107 bits (268), Expect = 1e-21
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
VAEYAA +I+QLEH+NTGCYI+LSSMYAD G+ ED ER+ LMK++GL++T RSLVEL
Sbjct: 604 VAEYAAERIYQLEHDNTGCYIVLSSMYADVGRWEDVERVRLLMKEKGLQRTEPRSLVELY 663
Query: 183 RRTYSFINGDRLHAQSSRIHEVS 251
SF NGD H QS IHEVS
Sbjct: 664 GIACSFANGDMSHPQSETIHEVS 686
>dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 101 bits (251), Expect = 1e-19
Identities = 51/88 (57%), Positives = 66/88 (75%), Gaps = 5/88 (5%)
Frame = +3
Query: 3 VAEYAAGKIFQLE-----HENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRS 167
+AEYAA +IFQLE H+NTGCY+L+SSMYADAG+ +D ER+ SLM+++GL +T RS
Sbjct: 600 IAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKSLMEEKGLRRTDPRS 659
Query: 168 LVELGRRTYSFINGDRLHAQSSRIHEVS 251
+VEL + SF+NGD H QS I EVS
Sbjct: 660 IVELHGISCSFVNGDTTHPQSKMIQEVS 687
>ref|XP_006412144.1| hypothetical protein EUTSA_v10024444mg [Eutrema salsugineum]
gi|557113314|gb|ESQ53597.1| hypothetical protein
EUTSA_v10024444mg [Eutrema salsugineum]
Length = 804
Score = 99.8 bits (247), Expect = 3e-19
Identities = 45/82 (54%), Positives = 64/82 (78%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
VAE+AA +IF++EH+NTGCY+LL +MY+DAG+ ED R+ LM +G+ + T RS VE
Sbjct: 617 VAEFAAEQIFKVEHDNTGCYVLLLNMYSDAGRMEDVNRIRLLMNSKGISRKTSRSTVETK 676
Query: 183 RRTYSFINGDRLHAQSSRIHEV 248
RT+ FINGDR HA++++I+EV
Sbjct: 677 HRTHVFINGDRSHAETNKIYEV 698
>gb|EMT16230.1| hypothetical protein F775_06704 [Aegilops tauschii]
Length = 620
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/89 (57%), Positives = 66/89 (74%), Gaps = 6/89 (6%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHE-----NTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRS 167
+AEYAA +IFQLEH+ NTGCY+L+SSMYADAG+ D ER+ SLM+++GL +T S
Sbjct: 431 IAEYAAERIFQLEHDQPEHDNTGCYVLISSMYADAGRWNDVERIRSLMEEKGLRRTEPTS 490
Query: 168 LVELGRR-TYSFINGDRLHAQSSRIHEVS 251
+VEL + SF+NGD +H QS IHEVS
Sbjct: 491 IVELLHGISCSFVNGDMMHPQSKMIHEVS 519
>gb|EMS63566.1| hypothetical protein TRIUR3_03361 [Triticum urartu]
Length = 630
Score = 98.6 bits (244), Expect = 8e-19
Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 5/88 (5%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHE-----NTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRS 167
+AEYAA +IFQLEH+ NTGCY+L+SSMYADAG+ D ER+ SLM+++GL +T S
Sbjct: 442 IAEYAAERIFQLEHDQLEHDNTGCYVLISSMYADAGRWNDVERIRSLMEEKGLRRTEPTS 501
Query: 168 LVELGRRTYSFINGDRLHAQSSRIHEVS 251
+VEL + SF+NGD H QS I EVS
Sbjct: 502 IVELHGISCSFVNGDTTHPQSKMIQEVS 529
>gb|EMJ00196.1| hypothetical protein PRUPE_ppa002025mg [Prunus persica]
Length = 727
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AE AA +I LEH+NTGCY+LLS+MYA+AG+ ED ER+ SLM+Q GLEKT S VE
Sbjct: 542 LAELAAERILALEHDNTGCYVLLSNMYAEAGRWEDVERIKSLMRQRGLEKTVGCSFVETN 601
Query: 183 RRTYSFINGDRLHAQSSRIHEV 248
R Y FIN DR H +++ I+ V
Sbjct: 602 CRLYRFINQDRSHVETNTIYSV 623
>ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis
thaliana] gi|7270464|emb|CAB80230.1| putative protein
[Arabidopsis thaliana] gi|332661071|gb|AEE86471.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 804
Score = 91.7 bits (226), Expect = 9e-17
Identities = 40/82 (48%), Positives = 63/82 (76%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AE+AA +IF++EH+NTGCY+LL +MYA+AG+ ED R+ LM+ +G+ +T+ RS VE
Sbjct: 618 IAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677
Query: 183 RRTYSFINGDRLHAQSSRIHEV 248
+++ F NGDR H +++I+EV
Sbjct: 678 GKSHVFTNGDRSHVATNKIYEV 699
>ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| hypothetical protein
POPTR_0004s18470g [Populus trichocarpa]
Length = 784
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/82 (52%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AE AA I L+H+NTGCY+LLS+MYA+AG+ ED +R+ LMK++GL KT S+V++
Sbjct: 599 LAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDIN 658
Query: 183 RRTYSFINGDRLHAQSSRIHEV 248
R+ SFIN DR HA ++ I++V
Sbjct: 659 GRSESFINQDRSHAHTNLIYDV 680
>ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297312926|gb|EFH43349.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 803
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/82 (48%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
VAE+AA +IF++EH+NTGCY+LL +MYA+A + ED R+ LM+ +G+ +T+ RS VE
Sbjct: 614 VAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAK 673
Query: 183 RRTYSFINGDRLHAQSSRIHEV 248
+T+ NGDR H ++++I+EV
Sbjct: 674 SKTHVLTNGDRSHVETNKIYEV 695
>ref|XP_002521253.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539521|gb|EEF41109.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 484
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/82 (50%), Positives = 62/82 (75%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AE AA IF LEH+NTGCY+LLS+MYA+AG+ ED E++ +LMK++G+ KT +VE
Sbjct: 299 LAELAAKHIFSLEHDNTGCYVLLSNMYAEAGRWEDVEQIKTLMKKKGIVKTVSCCMVETN 358
Query: 183 RRTYSFINGDRLHAQSSRIHEV 248
+++ FIN D+ H+Q + I++V
Sbjct: 359 GKSHKFINQDKSHSQINMIYDV 380
>ref|XP_004290750.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 803
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/82 (53%), Positives = 58/82 (70%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AE AA I LEH+NTGCY+LLS+MYA+AG+ ED ER+ MKQ+GL KT S VE
Sbjct: 618 LAEVAAENILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKQKGLNKTVGCSFVESK 677
Query: 183 RRTYSFINGDRLHAQSSRIHEV 248
+ Y FIN D+ H +S+ I++V
Sbjct: 678 CQPYRFINYDKSHVESNTIYDV 699
>gb|EXB24037.1| hypothetical protein L484_006069 [Morus notabilis]
Length = 797
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVE-- 176
+AE+AA IF LEH+NTGCY+LLS++YA+A + D ER+ SLMKQ G++KT SLVE
Sbjct: 610 LAEHAAEHIFALEHDNTGCYVLLSNLYAEAERWADVERIKSLMKQRGIKKTVGWSLVEST 669
Query: 177 LGRRTYSFINGDRLHAQSSRIHEV 248
+ Y FIN D+ H Q++ I++V
Sbjct: 670 TSSKPYKFINQDKSHVQTNIIYDV 693
>ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product
[Vitis vinifera]
Length = 802
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/82 (50%), Positives = 60/82 (73%)
Frame = +3
Query: 3 VAEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELG 182
+AE AA I LEH+NTGCY+LLS+MYA+AG+ ED ER+ MK+EGLEK+ S+V+L
Sbjct: 617 LAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLS 676
Query: 183 RRTYSFINGDRLHAQSSRIHEV 248
+T+ F+N DR + + +++V
Sbjct: 677 SKTFRFVNQDRSDNEINMVYDV 698
>ref|XP_006486706.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Citrus sinensis]
Length = 810
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/81 (46%), Positives = 58/81 (71%)
Frame = +3
Query: 6 AEYAAGKIFQLEHENTGCYILLSSMYADAGKREDAERMMSLMKQEGLEKTTVRSLVELGR 185
AE+AA + +NTGCY+LLS+MYA+AG+ ED E++ ++M++EGL+KTT S+ E
Sbjct: 626 AEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNG 685
Query: 186 RTYSFINGDRLHAQSSRIHEV 248
T+ FIN DR H+++ I+ V
Sbjct: 686 ETHRFINQDRSHSKTYLIYNV 706