BLASTX nr result
ID: Zingiber24_contig00052373
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052373
(252 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [The... 122 4e-26
ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 122 6e-26
ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [S... 121 8e-26
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t... 120 1e-25
ref|XP_006656246.1| PREDICTED: putative pentatricopeptide repeat... 120 2e-25
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat... 120 2e-25
emb|CBI29893.3| unnamed protein product [Vitis vinifera] 120 2e-25
ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat... 119 3e-25
dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japo... 119 3e-25
gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japo... 119 3e-25
gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii] 119 4e-25
gb|ESW17642.1| hypothetical protein PHAVU_007G256700g [Phaseolus... 118 7e-25
gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays] 118 7e-25
ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat... 118 7e-25
ref|XP_002322694.1| pentatricopeptide repeat-containing family p... 118 7e-25
ref|XP_006407172.1| hypothetical protein EUTSA_v10020299mg [Eutr... 118 9e-25
ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat... 117 1e-24
ref|XP_006421479.1| hypothetical protein CICLE_v10006760mg [Citr... 117 1e-24
ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat... 117 2e-24
ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat... 116 3e-24
>gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 718
Score = 122 bits (307), Expect = 4e-26
Identities = 55/83 (66%), Positives = 68/83 (81%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DRSHP+R+E+ K+ E+ ++K AGYVPDLSCVLHDVD+EQKE ILLGHSEKLA+ FGLM
Sbjct: 470 DRSHPRREEVLVKLKELSIKLKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALTFGLM 529
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+ +R+ KNLRIC+DCHNF
Sbjct: 530 ATSDGVPLRVIKNLRICVDCHNF 552
>ref|XP_004497943.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Cicer arietinum]
Length = 642
Score = 122 bits (305), Expect = 6e-26
Identities = 56/83 (67%), Positives = 66/83 (79%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DRSHP+R+EI K+ E+ R K GYVPDLSCVLHDVD+EQKE ILLGHSEKLA++FGL+
Sbjct: 526 DRSHPRREEICVKVKELSVRFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLI 585
Query: 184 GNACRESIRITKNLRICIDCHNF 252
IR+ KNLRIC+DCHNF
Sbjct: 586 ATPEHSPIRVIKNLRICVDCHNF 608
>ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein
SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 121 bits (304), Expect = 8e-26
Identities = 56/84 (66%), Positives = 68/84 (80%)
Frame = +1
Query: 1 CDRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGL 180
C+R HP++++I KI E+ IKAAG+VPDLSCVLHDVDDEQKE +LLGHSEKLAI FGL
Sbjct: 471 CERFHPRKEDINAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGL 530
Query: 181 MGNACRESIRITKNLRICIDCHNF 252
M +I++ KNLRIC+DCHNF
Sbjct: 531 MSTPSDLTIQVMKNLRICVDCHNF 554
>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 840
Score = 120 bits (302), Expect = 1e-25
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DRSHP+R+EI K+ E+ K GYVPDLSCVLHDVD+EQKE ILLGHSEKLA++FGL+
Sbjct: 724 DRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLI 783
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+ IR+ KNLRIC+DCHNF
Sbjct: 784 ASPASVPIRVIKNLRICVDCHNF 806
>ref|XP_006656246.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Oryza brachyantha]
Length = 438
Score = 120 bits (301), Expect = 2e-25
Identities = 58/83 (69%), Positives = 65/83 (78%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
D HP +K+I KI E+ IKAAG+VPDLSCVLHDVDDEQKE +LLGHSEKLAI FGLM
Sbjct: 322 DEFHPSKKDIDAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 381
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+IRI KNLRIC+DCHNF
Sbjct: 382 NTPSGLTIRIMKNLRICVDCHNF 404
>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 120 bits (300), Expect = 2e-25
Identities = 55/83 (66%), Positives = 68/83 (81%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DRSHP+++E+F K+ E+ +IK AGYVP+LSCVL+DVDDEQKE IL GHSEKLA+AFGL+
Sbjct: 937 DRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLI 996
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+RI KNLRIC+DCHNF
Sbjct: 997 CTPGGTPVRIIKNLRICVDCHNF 1019
>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 120 bits (300), Expect = 2e-25
Identities = 55/83 (66%), Positives = 68/83 (81%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DRSHP+++E+F K+ E+ +IK AGYVP+LSCVL+DVDDEQKE IL GHSEKLA+AFGL+
Sbjct: 470 DRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLI 529
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+RI KNLRIC+DCHNF
Sbjct: 530 CTPGGTPVRIIKNLRICVDCHNF 552
>ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Setaria italica]
Length = 608
Score = 119 bits (299), Expect = 3e-25
Identities = 56/83 (67%), Positives = 67/83 (80%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
+R HP++++I KI E+ IKAAG+VPDLSCVLHDVDDEQKE +LLGHSEKLAI FGLM
Sbjct: 492 ERFHPKKEDINAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 551
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+IR+ KNLRIC+DCHNF
Sbjct: 552 STPSGLTIRVMKNLRICVDCHNF 574
>dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 119 bits (299), Expect = 3e-25
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
+R HP +K+I KI E+ IKAAG+VPDLSCVLHDVDDEQKE +LLGHSEKLAI FGLM
Sbjct: 499 ERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 558
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+IR+ KNLRIC+DCHNF
Sbjct: 559 NTPPGLTIRVMKNLRICVDCHNF 581
>gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 119 bits (299), Expect = 3e-25
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
+R HP +K+I KI E+ IKAAG+VPDLSCVLHDVDDEQKE +LLGHSEKLAI FGLM
Sbjct: 467 ERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 526
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+IR+ KNLRIC+DCHNF
Sbjct: 527 NTPPGLTIRVMKNLRICVDCHNF 549
>gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii]
Length = 548
Score = 119 bits (298), Expect = 4e-25
Identities = 56/83 (67%), Positives = 67/83 (80%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DR HP++K+I KI E+ IKAAG+VP+LSCVLHDVDDEQKE +LLGHSEKLA+ FGLM
Sbjct: 432 DRFHPRKKDIDAKIKEIYVDIKAAGFVPNLSCVLHDVDDEQKERMLLGHSEKLAVTFGLM 491
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+IR+ KNLRIC+DCHNF
Sbjct: 492 NTPPGLTIRVMKNLRICVDCHNF 514
>gb|ESW17642.1| hypothetical protein PHAVU_007G256700g [Phaseolus vulgaris]
Length = 633
Score = 118 bits (296), Expect = 7e-25
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
D SHP+RKE+ K+ E+ R K AGYVPDLSCVLHDVD+EQKE ILL HSEKLA+ FGL+
Sbjct: 517 DCSHPRRKEVSAKVQELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALCFGLI 576
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+ IR+ KNLRIC+DCHNF
Sbjct: 577 ASPESVPIRVIKNLRICVDCHNF 599
>gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 118 bits (296), Expect = 7e-25
Identities = 55/83 (66%), Positives = 67/83 (80%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
+R HP++++I KI E+ IKAAG+VPDLSCVLHDVDDEQKE +LLGHSEKLAI FGLM
Sbjct: 494 ERFHPRKEDINVKINEIYAAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 553
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+I++ KNLRIC+DCHNF
Sbjct: 554 STPSDLTIQVMKNLRICVDCHNF 576
>ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 118 bits (296), Expect = 7e-25
Identities = 56/83 (67%), Positives = 67/83 (80%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
+R HP++K+I KI EV +KAAG+VPDLSCVLHDVDDEQKE +LLGHSEKLAI FGLM
Sbjct: 498 ERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 557
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+I++ KNLRIC+DCHNF
Sbjct: 558 NTPPGLTIQVMKNLRICVDCHNF 580
>ref|XP_002322694.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222867324|gb|EEF04455.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 586
Score = 118 bits (296), Expect = 7e-25
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DRSHP+R+E+F K+ E+ + K +GYVPD SCVL+DVD+EQKE ILLGHSEKLA+AFGL+
Sbjct: 470 DRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLI 529
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+ +R+ KNLRIC+DCHNF
Sbjct: 530 STSEGVPLRVIKNLRICVDCHNF 552
>ref|XP_006407172.1| hypothetical protein EUTSA_v10020299mg [Eutrema salsugineum]
gi|557108318|gb|ESQ48625.1| hypothetical protein
EUTSA_v10020299mg [Eutrema salsugineum]
Length = 627
Score = 118 bits (295), Expect = 9e-25
Identities = 52/83 (62%), Positives = 67/83 (80%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DR+HP+R+E+ DK+ E+ ++K AGYVPD SCVL+DVD+EQKE +LLGHSEKLA+ FGL+
Sbjct: 511 DRTHPRREEVLDKLKEILIKMKQAGYVPDPSCVLYDVDEEQKEKMLLGHSEKLALTFGLI 570
Query: 184 GNACRESIRITKNLRICIDCHNF 252
IR+ KNLRIC+DCHNF
Sbjct: 571 ATGKGTPIRVFKNLRICVDCHNF 593
>ref|XP_006490046.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Citrus sinensis]
Length = 644
Score = 117 bits (294), Expect = 1e-24
Identities = 52/83 (62%), Positives = 66/83 (79%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DRSHP R+E+ K+ ++ + K AGYVPD+SCVL+DVD+EQKE +LLGHSEKLA+ FGL+
Sbjct: 528 DRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLI 587
Query: 184 GNACRESIRITKNLRICIDCHNF 252
G IR+ KNLRIC+DCHNF
Sbjct: 588 GTPEGAPIRVIKNLRICVDCHNF 610
>ref|XP_006421479.1| hypothetical protein CICLE_v10006760mg [Citrus clementina]
gi|557523352|gb|ESR34719.1| hypothetical protein
CICLE_v10006760mg [Citrus clementina]
Length = 688
Score = 117 bits (294), Expect = 1e-24
Identities = 52/83 (62%), Positives = 66/83 (79%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DRSHP R+E+ K+ ++ + K AGYVPD+SCVL+DVD+EQKE +LLGHSEKLA+ FGL+
Sbjct: 470 DRSHPMREELSAKVKQLSVKFKEAGYVPDMSCVLYDVDEEQKEKVLLGHSEKLALTFGLI 529
Query: 184 GNACRESIRITKNLRICIDCHNF 252
G IR+ KNLRIC+DCHNF
Sbjct: 530 GTPEGAPIRVIKNLRICVDCHNF 552
>ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like isoform X1 [Glycine max]
gi|571440626|ref|XP_006575216.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At3g13770,
mitochondrial-like isoform X2 [Glycine max]
Length = 634
Score = 117 bits (292), Expect = 2e-24
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
D SHP+R+E+ K+ E+ R K AGYVPDLSCVLHDVD+EQKE ILL HSEKLA+ FGL+
Sbjct: 518 DCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLI 577
Query: 184 GNACRESIRITKNLRICIDCHNF 252
IR+ KNLRIC+DCHNF
Sbjct: 578 ATPESVPIRVIKNLRICVDCHNF 600
>ref|XP_004306162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 637
Score = 116 bits (290), Expect = 3e-24
Identities = 50/83 (60%), Positives = 66/83 (79%)
Frame = +1
Query: 4 DRSHPQRKEIFDKITEVCERIKAAGYVPDLSCVLHDVDDEQKESILLGHSEKLAIAFGLM 183
DRSHP+R+E+ K+ E+ +IK AGY P++ CVL+DVDDEQKE ILLGHSEK+A+AFG++
Sbjct: 521 DRSHPRREEVSAKVREISAKIKEAGYSPEMECVLYDVDDEQKEKILLGHSEKMALAFGII 580
Query: 184 GNACRESIRITKNLRICIDCHNF 252
+R+ KNLRIC+DCHNF
Sbjct: 581 ATPEGAPVRVIKNLRICVDCHNF 603