BLASTX nr result
ID: Zingiber24_contig00052318
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052318
(352 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGG38096.1| chloroplast omega-3 fatty acid desaturase 7 isozy... 100 3e-19
gb|AGG38095.1| chloroplast omega-3 fatty acid desaturase 7 isozy... 100 3e-19
gb|AGG38099.1| chloroplast omega-3 fatty acid desaturase 7 isozy... 99 4e-19
gb|AGG38098.1| chloroplast omega-3 fatty acid desaturase 7 isozy... 99 4e-19
gb|AGG38097.1| chloroplast omega-3 fatty acid desaturase 7 isozy... 99 4e-19
gb|AGG38100.1| chloroplast omega-3 fatty acid desaturase 7 isozy... 84 1e-14
emb|CAB45155.1| omega-3 desaturase [Vernicia fordii] 82 7e-14
gb|AAC98967.2| omega-3 fatty acid desaturase [Vernicia fordii] 82 7e-14
gb|ACS26172.1| chloroplast fatty acid desaturase 8 [Brassica napus] 82 9e-14
gb|AAD15744.1| omega-3 fatty acid desaturase [Perilla frutescens] 81 1e-13
gb|AAA86690.1| delta-15 lineoyl desaturase [Limnanthes douglasii] 81 2e-13
sp|P48618.1|FAD3C_BRANA RecName: Full=Omega-3 fatty acid desatur... 80 3e-13
gb|AAD41573.1|AF056561_1 unknown [Brassica rapa] 80 3e-13
gb|ACS26170.1| chloroplast fatty acid desaturase 7 [Brassica napus] 80 4e-13
gb|AAD41575.1|AF056563_1 unknown [Brassica oleracea] gi|5305760|... 79 5e-13
emb|CAB85467.1| chloroplast omega-3 fatty acid desaturase [Brass... 79 6e-13
gb|AAD41800.1|AF140053_1 unknown [Brassica napus] 79 6e-13
gb|AAW78909.2| fatty acid desaturase [Brassica rapa subsp. pekin... 79 8e-13
ref|XP_006488542.1| PREDICTED: omega-3 fatty acid desaturase, en... 78 1e-12
ref|XP_004294292.1| PREDICTED: omega-3 fatty acid desaturase, ch... 77 2e-12
>gb|AGG38096.1| chloroplast omega-3 fatty acid desaturase 7 isozyme 2b [Musa AB
Group]
Length = 163
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/110 (43%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Frame = +3
Query: 45 SFPRPRISLRHLLLWPWAVTSP---------RKVAPPAIPTKEEDEAADSQLWMPPPFKI 197
SFPRPRISL L +WPW+ P +K A+ +E A + Q PPPF+I
Sbjct: 6 SFPRPRISL--LYIWPWSTAVPALKKTVAQTKKQKVDALNPEESAAAEEVQSGKPPPFRI 63
Query: 198 GDVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYW 347
GDVRAAIP HCW+K+PWRS+SY W FWP+YW
Sbjct: 64 GDVRAAIPGHCWVKDPWRSMSYVLRDAVVVALLALAAASLDSWTFWPLYW 113
>gb|AGG38095.1| chloroplast omega-3 fatty acid desaturase 7 isozyme 2a [Musa AB
Group]
Length = 411
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/110 (43%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Frame = +3
Query: 45 SFPRPRISLRHLLLWPWAVTSP---------RKVAPPAIPTKEEDEAADSQLWMPPPFKI 197
SFPRPRISL L +WPW+ P +K A+ +E A + Q PPPF+I
Sbjct: 6 SFPRPRISL--LYIWPWSTAVPALKKTVAQTKKQKVDALNPEESAAAEEVQSGKPPPFRI 63
Query: 198 GDVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYW 347
GDVRAAIP HCW+K+PWRS+SY W FWP+YW
Sbjct: 64 GDVRAAIPGHCWVKDPWRSMSYVLRDAVVVALLALAAASLDSWTFWPLYW 113
>gb|AGG38099.1| chloroplast omega-3 fatty acid desaturase 7 isozyme 2e [Musa ABB
Group]
Length = 162
Score = 99.4 bits (246), Expect = 4e-19
Identities = 50/109 (45%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Frame = +3
Query: 45 SFPRPRISLRHLLLWPWAVTSP--RKVAPPAIPTK------EEDEAADSQLWMPPPFKIG 200
SF RPRISL L +WPW+ P +K P K EE A + Q PPPF+IG
Sbjct: 6 SFLRPRISL--LYIWPWSTAVPALKKTVAPTKKQKVDALNPEESAAEEVQSGKPPPFRIG 63
Query: 201 DVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYW 347
DVRAAIPSHCW+K+PWRS+SY W FWP+YW
Sbjct: 64 DVRAAIPSHCWVKDPWRSMSYVLRDAVVVALLALAAASLDSWTFWPLYW 112
>gb|AGG38098.1| chloroplast omega-3 fatty acid desaturase 7 isozyme 2d [Musa ABB
Group]
Length = 162
Score = 99.4 bits (246), Expect = 4e-19
Identities = 50/109 (45%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Frame = +3
Query: 45 SFPRPRISLRHLLLWPWAVTSP--RKVAPPAIPTK------EEDEAADSQLWMPPPFKIG 200
SF RPRISL L +WPW+ P +K P K EE A + Q PPPF+IG
Sbjct: 6 SFLRPRISL--LYIWPWSTAVPALKKTVAPTKKQKVDALNPEESAAEEVQSGKPPPFRIG 63
Query: 201 DVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYW 347
DVRAAIPSHCW+K+PWRS+SY W FWP+YW
Sbjct: 64 DVRAAIPSHCWVKDPWRSMSYVLRDAVVVALLALAAASLDSWTFWPLYW 112
>gb|AGG38097.1| chloroplast omega-3 fatty acid desaturase 7 isozyme 2c [Musa ABB
Group]
Length = 410
Score = 99.4 bits (246), Expect = 4e-19
Identities = 50/109 (45%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Frame = +3
Query: 45 SFPRPRISLRHLLLWPWAVTSP--RKVAPPAIPTK------EEDEAADSQLWMPPPFKIG 200
SF RPRISL L +WPW+ P +K P K EE A + Q PPPF+IG
Sbjct: 6 SFLRPRISL--LYIWPWSTAVPALKKTVAPTKKQKVDALNPEESAAEEVQSGKPPPFRIG 63
Query: 201 DVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYW 347
DVRAAIPSHCW+K+PWRS+SY W FWP+YW
Sbjct: 64 DVRAAIPSHCWVKDPWRSMSYVPRDAVVVALLALAAASLDSWTFWPLYW 112
>gb|AGG38100.1| chloroplast omega-3 fatty acid desaturase 7 isozyme 3 [Musa AB
Group]
Length = 411
Score = 84.3 bits (207), Expect = 1e-14
Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Frame = +3
Query: 57 PRISLRHLLLWPWAVTSPRKVAPP---AIPTKEEDEAADSQ-----LWMPPPFKIGDVRA 212
P + L +WPW+ T+ AP AI +EE+ A S+ L PPPF+IGDVRA
Sbjct: 9 PFSGISPLCIWPWSWTAAAAPAPKKMVAITGREEEVTAKSEEDKSDLGRPPPFRIGDVRA 68
Query: 213 AIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYWI 350
AIPSHCW+K+PW S+SY W W +YW+
Sbjct: 69 AIPSHCWVKDPWWSMSYVLRDVVVIAALAVAAGYLDSWIVWLIYWL 114
>emb|CAB45155.1| omega-3 desaturase [Vernicia fordii]
Length = 387
Score = 82.0 bits (201), Expect = 7e-14
Identities = 34/69 (49%), Positives = 39/69 (56%)
Frame = +3
Query: 141 KEEDEAADSQLWMPPPFKIGDVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXX 320
KEE+E D L PPPF IG +RAAIP HCW+KNPWRSL+Y
Sbjct: 21 KEEEEEEDFDLSNPPPFNIGQIRAAIPKHCWVKNPWRSLTYVFRDVVVVFALAAAAFYFN 80
Query: 321 XWAFWPVYW 347
W FWP+YW
Sbjct: 81 SWLFWPLYW 89
>gb|AAC98967.2| omega-3 fatty acid desaturase [Vernicia fordii]
Length = 387
Score = 82.0 bits (201), Expect = 7e-14
Identities = 34/69 (49%), Positives = 39/69 (56%)
Frame = +3
Query: 141 KEEDEAADSQLWMPPPFKIGDVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXX 320
KEE+E D L PPPF IG +RAAIP HCW+KNPWRSL+Y
Sbjct: 21 KEEEEEEDFDLSNPPPFNIGQIRAAIPKHCWVKNPWRSLTYVFRDVVVVFALAAAAFYFN 80
Query: 321 XWAFWPVYW 347
W FWP+YW
Sbjct: 81 SWLFWPLYW 89
>gb|ACS26172.1| chloroplast fatty acid desaturase 8 [Brassica napus]
Length = 432
Score = 81.6 bits (200), Expect = 9e-14
Identities = 33/85 (38%), Positives = 44/85 (51%)
Frame = +3
Query: 93 WAVTSPRKVAPPAIPTKEEDEAADSQLWMPPPFKIGDVRAAIPSHCWIKNPWRSLSYXXX 272
WA+ + P +EE++A+ L PPPF + D+RAAIP HCW+KNPWRS+SY
Sbjct: 54 WALNVATPLTTLETPPEEEEDASRFDLGAPPPFNLADIRAAIPKHCWVKNPWRSMSYVVG 113
Query: 273 XXXXXXXXXXXXXXXXXWAFWPVYW 347
W WP+YW
Sbjct: 114 DVAIVFGLAAVAAYFNSWLLWPLYW 138
>gb|AAD15744.1| omega-3 fatty acid desaturase [Perilla frutescens]
Length = 391
Score = 81.3 bits (199), Expect = 1e-13
Identities = 33/57 (57%), Positives = 36/57 (63%)
Frame = +3
Query: 180 PPPFKIGDVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYWI 350
PPPFKI D+RAAIP+HCW+KNPWRSLSY WAFWPVYWI
Sbjct: 41 PPPFKIADIRAAIPAHCWVKNPWRSLSYVVWDVAAVFALLAAAVYINSWAFWPVYWI 97
>gb|AAA86690.1| delta-15 lineoyl desaturase [Limnanthes douglasii]
Length = 436
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +3
Query: 99 VTSPRKVAPPAIPTKEEDEAADSQLWMPPPFKIGDVRAAIPSHCWIKNPWRSLSYXXXXX 278
V++P ++A + +EEDE A+ PPPFK+ D+RAAIP HCW+KN WRS+SY
Sbjct: 60 VSAPFQIA--STTPEEEDEVAEFDPGSPPPFKLADIRAAIPKHCWVKNQWRSMSYVVRDV 117
Query: 279 XXXXXXXXXXXXXXXWAFWPVYWI 350
WA WP+YW+
Sbjct: 118 VIVLGLAAAAVAANSWAVWPLYWV 141
>sp|P48618.1|FAD3C_BRANA RecName: Full=Omega-3 fatty acid desaturase, chloroplastic; Flags:
Precursor
Length = 404
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +3
Query: 36 APSSFPRPRISLRHLLLWPWAVTSPRKV-APPAIPTKEEDEAADSQLWMPPPFKIGDVRA 212
+PSS PR R++ R+ W VT+P V + + P +EE + PPPF + D+RA
Sbjct: 6 SPSS-PRFRLNSRN---WALNVTTPLTVDSSSSPPIEEEPKTQRFDPGAPPPFNLADIRA 61
Query: 213 AIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYWI 350
AIP HCW+KNPW+S+SY W WP+YWI
Sbjct: 62 AIPKHCWVKNPWKSMSYVVRELAIVFALAAGAAYLNNWLVWPLYWI 107
>gb|AAD41573.1|AF056561_1 unknown [Brassica rapa]
Length = 163
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +3
Query: 36 APSSFPRPRISLRHLLLWPWAVTSPRKV-APPAIPTKEEDEAADSQLWMPPPFKIGDVRA 212
+PSS PR R++ R+ W VT+P V + + P +EE + PPPF + D+RA
Sbjct: 8 SPSS-PRFRLNSRN---WALNVTTPLTVDSSSSPPIEEEPKTQRFDPGAPPPFNLADIRA 63
Query: 213 AIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYWI 350
AIP HCW+KNPW+S+SY W WP+YWI
Sbjct: 64 AIPKHCWVKNPWKSMSYVVRDVAIVFALAAGAAYLNNWLVWPLYWI 109
>gb|ACS26170.1| chloroplast fatty acid desaturase 7 [Brassica napus]
Length = 432
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 51 PRPRISLRHLLLWPWA--VTSPRKVAPPAIPTKEEDEAADSQLWMPPPFKIGDVRAAIPS 224
P P L WA VT+P V + PT EE E PPPF + D+RAAIP
Sbjct: 35 PSPAFRLNGFSTKNWALNVTTPLTV-DSSPPTSEEHETQRFDPGAPPPFNLADIRAAIPK 93
Query: 225 HCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYWI 350
HCW+KNPW+S+SY W WP+YWI
Sbjct: 94 HCWVKNPWKSMSYVVRDVAIVFALAAGAAYLNNWLVWPLYWI 135
>gb|AAD41575.1|AF056563_1 unknown [Brassica oleracea] gi|5305760|gb|AAD41802.1|AF140057_1
unknown [Brassica napus]
Length = 165
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +3
Query: 51 PRPRISLRHLLLWPWA---VTSPRKVAPPAIPTKEEDEAADSQLWMPPPFKIGDVRAAIP 221
P P L WA VT+P P PT EE E PPPF + D+RAAIP
Sbjct: 9 PSPAFRLNGFSTKNWAALNVTTPLTADSPP-PTSEEHERQRFDPGAPPPFNLADIRAAIP 67
Query: 222 SHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYWI 350
HCW+KNPW+S+SY W WP+YW+
Sbjct: 68 KHCWVKNPWKSMSYVVRDVAIVFALAAGAAYLNSWLVWPLYWL 110
>emb|CAB85467.1| chloroplast omega-3 fatty acid desaturase [Brassica juncea]
Length = 429
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +3
Query: 51 PRPRISLRHLLLWPWA--VTSPRKVAPPAIPTKEEDEAADSQLWMPPPFKIGDVRAAIPS 224
P P L WA VT+P V + PT EE E PPPF + D+RAAIP
Sbjct: 35 PSPAFRLNGFSTKNWALNVTTPLTV-DSSPPTSEEHETQRFDPGAPPPFNLADIRAAIPK 93
Query: 225 HCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYWI 350
HCW+KNPW+S+SY W WP+YW+
Sbjct: 94 HCWVKNPWKSMSYVVRDVAIVFALAAGAAYLNSWLVWPLYWL 135
>gb|AAD41800.1|AF140053_1 unknown [Brassica napus]
Length = 157
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +3
Query: 36 APSSFPRPRISLRHLLLWPWAVTSPRKV-APPAIPTKEEDEAADSQLWMPPPFKIGDVRA 212
+PSS PR R++ R+ W VT+P V + + P +EE + PPPF + D++A
Sbjct: 8 SPSS-PRFRLNSRN---WALNVTTPLTVDSSSSPPIEEEPKTQRFDPGAPPPFNLADIKA 63
Query: 213 AIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYWI 350
AIP HCW+KNPW+S+SY W WP+YWI
Sbjct: 64 AIPKHCWVKNPWKSMSYVVRDVAIVFALAAGAAYLNNWLVWPLYWI 109
>gb|AAW78909.2| fatty acid desaturase [Brassica rapa subsp. pekinensis]
Length = 432
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/106 (33%), Positives = 50/106 (47%)
Frame = +3
Query: 30 MTAPSSFPRPRISLRHLLLWPWAVTSPRKVAPPAIPTKEEDEAADSQLWMPPPFKIGDVR 209
+ PSS + L W V +P + P +EE++A+ PPPF + D+R
Sbjct: 35 LNPPSSLNSRSVFLARTRNWALNVATP--LTTLETPPEEEEDASRFDPGAPPPFNLADIR 92
Query: 210 AAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYW 347
AAIP HCW+KNPW+S+SY W WP+YW
Sbjct: 93 AAIPKHCWVKNPWKSMSYVVRDVAIVFGLAAVAAYFNSWLLWPLYW 138
>ref|XP_006488542.1| PREDICTED: omega-3 fatty acid desaturase, endoplasmic
reticulum-like [Citrus sinensis]
Length = 385
Score = 77.8 bits (190), Expect = 1e-12
Identities = 30/57 (52%), Positives = 35/57 (61%)
Frame = +3
Query: 180 PPPFKIGDVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXXXXXWAFWPVYWI 350
PPPFKIG++RAAIP HCW+KNPWRSLSY W FWP+YW+
Sbjct: 28 PPPFKIGEIRAAIPKHCWVKNPWRSLSYVLRDLLVVLALLAAATHFNTWFFWPLYWV 84
>ref|XP_004294292.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 387
Score = 77.0 bits (188), Expect = 2e-12
Identities = 32/71 (45%), Positives = 37/71 (52%)
Frame = +3
Query: 135 PTKEEDEAADSQLWMPPPFKIGDVRAAIPSHCWIKNPWRSLSYXXXXXXXXXXXXXXXXX 314
P +ED AD PPPFKI ++RAAIP HCW+KNPWRS SY
Sbjct: 18 PNNKEDHDADFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSFSYVLRDLVVIFAMAAAAIY 77
Query: 315 XXXWAFWPVYW 347
W WP+YW
Sbjct: 78 FNNWYVWPLYW 88