BLASTX nr result
ID: Zingiber24_contig00052295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052295
(291 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006292165.1| hypothetical protein CARUB_v10018371mg, part... 128 7e-28
ref|NP_186850.1| pentatricopeptide repeat-containing protein [Ar... 125 6e-27
ref|XP_004493071.1| PREDICTED: putative pentatricopeptide repeat... 122 4e-26
gb|EMT02491.1| hypothetical protein F775_52486 [Aegilops tauschii] 122 5e-26
ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat... 122 5e-26
ref|XP_002885940.1| pentatricopeptide repeat-containing protein ... 121 1e-25
ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat... 120 1e-25
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ... 120 1e-25
gb|ESW33622.1| hypothetical protein PHAVU_001G085300g [Phaseolus... 120 2e-25
ref|XP_006405473.1| hypothetical protein EUTSA_v10027641mg [Eutr... 119 3e-25
ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 119 3e-25
ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat... 119 3e-25
ref|XP_004967899.1| PREDICTED: putative pentatricopeptide repeat... 118 9e-25
ref|XP_002303012.2| pentatricopeptide repeat-containing family p... 117 2e-24
ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat... 117 2e-24
emb|CBI21281.3| unnamed protein product [Vitis vinifera] 117 2e-24
dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group] gi|2080... 116 4e-24
dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Grou... 116 4e-24
gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japo... 116 4e-24
ref|XP_006468886.1| PREDICTED: putative pentatricopeptide repeat... 115 8e-24
>ref|XP_006292165.1| hypothetical protein CARUB_v10018371mg, partial [Capsella rubella]
gi|482560872|gb|EOA25063.1| hypothetical protein
CARUB_v10018371mg, partial [Capsella rubella]
Length = 849
Score = 128 bits (322), Expect = 7e-28
Identities = 57/98 (58%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH G V++G +YF++MS ++G+ P R+HYAC++DL+GR GR E EKL+DE+PFEAD+I
Sbjct: 587 CSHCGLVEQGTEYFQAMSTIYGITPTRKHYACMLDLLGRNGRFTEAEKLMDEMPFEADEI 646
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+S+LNS RIH NH LA AA +LFSM ++DAA +V
Sbjct: 647 MWSSVLNSCRIHKNHSLAERAAEKLFSMEKLRDAAAYV 684
>ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At2g01510 gi|6091739|gb|AAF03451.1|AC010797_27
hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical
protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 125 bits (314), Expect = 6e-27
Identities = 55/98 (56%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH GFV++G +YF++MS ++G+ PK++HYAC++DL+GR GR E EKL+DE+PFE D+I
Sbjct: 563 CSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+S+LN+ RIH N LA AA +LFSM ++DAA +V
Sbjct: 623 MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYV 660
>ref|XP_004493071.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cicer arietinum]
Length = 812
Score = 122 bits (307), Expect = 4e-26
Identities = 57/98 (58%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH G V+EGLQYF SM++++ L PK+EHYA +ID++ R GR DE EKL+ ++PFE D+I
Sbjct: 550 CSHCGLVEEGLQYFNSMTQIYKLVPKKEHYASIIDMLCRGGRFDEAEKLMAQMPFEPDEI 609
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNI-KDAAPFV 1
W+S+LNS RIH N ELA+ AA +LF+M + +DAAP+V
Sbjct: 610 TWSSVLNSCRIHKNQELAKIAAEKLFNMEVLRDAAPYV 647
>gb|EMT02491.1| hypothetical protein F775_52486 [Aegilops tauschii]
Length = 1090
Score = 122 bits (306), Expect = 5e-26
Identities = 56/97 (57%), Positives = 73/97 (75%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSHNG +E ++YFE M +G+ P + HYACVID +GRVGR D+V+K++ +PFE D I
Sbjct: 605 CSHNGLAEECMKYFELMEDEYGISPWKGHYACVIDTLGRVGRFDKVQKMLSVMPFEDDPI 664
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNIKDAAPFV 1
IW+SIL+S RIHGN +LAR AA +LFSM DA P+V
Sbjct: 665 IWSSILHSCRIHGNQDLARVAAEKLFSMGSTDATPYV 701
>ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 122 bits (306), Expect = 5e-26
Identities = 55/97 (56%), Positives = 74/97 (76%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSHNG +E ++YFE M +G+ P +EHY+CVID +GRVGR D+V++++ E+PFE D I
Sbjct: 553 CSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPI 612
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNIKDAAPFV 1
IW+SIL+S R HGN +LAR AA +LFSM DA P+V
Sbjct: 613 IWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYV 649
>ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297331780|gb|EFH62199.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 944
Score = 121 bits (303), Expect = 1e-25
Identities = 53/98 (54%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH GFV++G ++F++MS ++G+ PK++HYAC++DL+GR GR E EKL+DE+PFE D+I
Sbjct: 557 CSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 616
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+S+LN+ RI+ N LA AA +LFSM ++DAA +V
Sbjct: 617 MWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYV 654
>ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 120 bits (302), Expect = 1e-25
Identities = 57/98 (58%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH G V+EGLQYF SM++++ L+P+REHYA ++D++ R GR DE EKL+ +PFE D+I
Sbjct: 553 CSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEI 612
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+SILNS RIH N ELA AA +LF+M ++DAAP+V
Sbjct: 613 MWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYV 650
>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 120 bits (302), Expect = 1e-25
Identities = 56/98 (57%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH G V+EGLQYF+SM++++ L PK+EHYA ID++ R GR DE EKL+ ++PFE D+I
Sbjct: 612 CSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEI 671
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNI-KDAAPFV 1
+W+S+LNS IH N ELA+ AA +LF+M + +DAAP+V
Sbjct: 672 MWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYV 709
>gb|ESW33622.1| hypothetical protein PHAVU_001G085300g [Phaseolus vulgaris]
Length = 862
Score = 120 bits (301), Expect = 2e-25
Identities = 56/98 (57%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH G V+EGLQYF SM++++ PKREHYA ++D++ R GR DE EKL+ +PFE D++
Sbjct: 600 CSHCGLVEEGLQYFSSMTQVYKFVPKREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEV 659
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNI-KDAAPFV 1
+W SILNS RIH N E+ + AA +LFSM I +DAAP+V
Sbjct: 660 MWTSILNSCRIHKNQEMGKRAADQLFSMKILRDAAPYV 697
>ref|XP_006405473.1| hypothetical protein EUTSA_v10027641mg [Eutrema salsugineum]
gi|557106611|gb|ESQ46926.1| hypothetical protein
EUTSA_v10027641mg [Eutrema salsugineum]
Length = 824
Score = 119 bits (299), Expect = 3e-25
Identities = 53/98 (54%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH GFV++G +YF+ MS+++G+ P ++HYAC++DL+GR GR E EKL+ E+PFE D+I
Sbjct: 562 CSHCGFVEQGTEYFQGMSRIYGITPGKKHYACMLDLLGRNGRFAEAEKLMREMPFEPDEI 621
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+S+LN+ RIH N LA AA +LFSM ++DAA +V
Sbjct: 622 MWSSVLNACRIHKNQGLAERAAEKLFSMEKLRDAAAYV 659
>ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 119 bits (299), Expect = 3e-25
Identities = 54/98 (55%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH GFV+E L +F SM++++ + PKREHY ++D++ R GR DE EKL+ E+PFE +I
Sbjct: 554 CSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEI 613
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+S+LNS RIH NHELA+ AA RLF+M +++DAAP++
Sbjct: 614 MWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651
>ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 119 bits (299), Expect = 3e-25
Identities = 54/98 (55%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH GFV+E L +F SM++++ + PKREHY ++D++ R GR DE EKL+ E+PFE +I
Sbjct: 554 CSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEI 613
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+S+LNS RIH NHELA+ AA RLF+M +++DAAP++
Sbjct: 614 MWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651
>ref|XP_004967899.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Setaria italica]
Length = 615
Score = 118 bits (295), Expect = 9e-25
Identities = 53/97 (54%), Positives = 72/97 (74%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSHNG +E ++YF+ M + + P +EHY+CVID +GR G D+V+K++DE+PFE D I
Sbjct: 354 CSHNGLAEECMKYFDLMKYYYSMSPWKEHYSCVIDTLGRAGYFDKVQKVLDEMPFEDDPI 413
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNIKDAAPFV 1
IW+SIL+S RIHGN +LA AA +LFSM DA P+V
Sbjct: 414 IWSSILHSCRIHGNQDLAAMAAEKLFSMAPTDATPYV 450
>ref|XP_002303012.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550345695|gb|EEE82285.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 814
Score = 117 bits (293), Expect = 2e-24
Identities = 54/98 (55%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH V+EGL+YF MS ++ L PKREHY ++D + R GR DE EKL+ ++PFE D+I
Sbjct: 552 CSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEI 611
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNI-KDAAPFV 1
+W S+LNS RIH N+ LAR AA +LF+M + +DAAP+V
Sbjct: 612 VWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYV 649
>ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 117 bits (292), Expect = 2e-24
Identities = 53/98 (54%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH+G V+EGL +F SM++++ L P+REHYA V+D++ R GR +E EKL+ E+P + D+I
Sbjct: 563 CSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEI 622
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+S+LN+ RIH N ELAR AA +LF+M ++DAAP+V
Sbjct: 623 MWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYV 660
>emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 117 bits (292), Expect = 2e-24
Identities = 53/98 (54%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH+G V+EGL +F SM++++ L P+REHYA V+D++ R GR +E EKL+ E+P + D+I
Sbjct: 523 CSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEI 582
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+S+LN+ RIH N ELAR AA +LF+M ++DAAP+V
Sbjct: 583 MWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYV 620
>dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa
Japonica Group]
Length = 1122
Score = 116 bits (290), Expect = 4e-24
Identities = 54/97 (55%), Positives = 69/97 (71%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSHNG E ++YF M + + P +EHYACVID +GRVG +V+K++ E+PF+AD I
Sbjct: 549 CSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPI 608
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNIKDAAPFV 1
IW SIL+S RIHGN ELAR AA +LF M DA P+V
Sbjct: 609 IWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYV 645
>dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein
OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 116 bits (290), Expect = 4e-24
Identities = 54/97 (55%), Positives = 69/97 (71%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSHNG E ++YF M + + P +EHYACVID +GRVG +V+K++ E+PF+AD I
Sbjct: 549 CSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPI 608
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNIKDAAPFV 1
IW SIL+S RIHGN ELAR AA +LF M DA P+V
Sbjct: 609 IWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYV 645
>gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 116 bits (290), Expect = 4e-24
Identities = 54/97 (55%), Positives = 69/97 (71%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSHNG E ++YF M + + P +EHYACVID +GRVG +V+K++ E+PF+AD I
Sbjct: 747 CSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPI 806
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSMNIKDAAPFV 1
IW SIL+S RIHGN ELAR AA +LF M DA P+V
Sbjct: 807 IWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYV 843
>ref|XP_006468886.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Citrus sinensis]
Length = 828
Score = 115 bits (287), Expect = 8e-24
Identities = 52/98 (53%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSHNGFVKEGLQYFESMSKLHGLKPKREHYACVIDLMGRVGRLDEVEKLVDEIPFEADQI 112
CSH G ++EGLQYF SM++ + L+PK+EHYA ++D++ R G DE EKL+ ++PFE D+I
Sbjct: 566 CSHCGLIEEGLQYFNSMTQKYKLRPKKEHYASMVDILCRSGCFDEAEKLMAQMPFEPDEI 625
Query: 111 IWNSILNSSRIHGNHELARHAAARLFSM-NIKDAAPFV 1
+W+S++NS RIH N E A+ AA +LF M ++DAAP+V
Sbjct: 626 MWSSVINSCRIHKNLEFAKKAADQLFKMEKLRDAAPYV 663