BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00052244
         (223 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
emb|CBI41082.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. l...    57   3e-06
ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Popu...    57   3e-06
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    57   3e-06
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
gb|EXB96783.1| hypothetical protein L484_001891 [Morus notabilis]      56   6e-06
ref|XP_006841618.1| hypothetical protein AMTR_s00003p00222920 [A...    56   6e-06
ref|XP_006857627.1| hypothetical protein AMTR_s00061p00127300 [A...    55   8e-06
emb|CBI20844.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/74 (43%), Positives = 47/74 (63%)
 Frame = -2

Query: 222 FLWNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHS 43
           F+WNT IR +L   N  ES+ L  +MR  E + +D++ LSL +QACG L     G+ LH+
Sbjct: 70  FIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHT 129

Query: 42  LVVKLGFVLDVFVQ 1
            V+K+G   D+FV+
Sbjct: 130 QVLKIGLGSDLFVE 143


>emb|CBI41082.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/74 (43%), Positives = 47/74 (63%)
 Frame = -2

Query: 222 FLWNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHS 43
           F+WNT IR +L   N  ES+ L  +MR  E + +D++ LSL +QACG L     G+ LH+
Sbjct: 64  FIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHT 123

Query: 42  LVVKLGFVLDVFVQ 1
            V+K+G   D+FV+
Sbjct: 124 QVLKIGLGSDLFVE 137


>ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 595

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/74 (37%), Positives = 42/74 (56%)
 Frame = -2

Query: 222 FLWNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHS 43
           F+WNT IR + + GN   ++ L R MR    V  DT      L+A G +    +GET+HS
Sbjct: 86  FIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHS 145

Query: 42  LVVKLGFVLDVFVQ 1
           +V++ GF   ++VQ
Sbjct: 146 VVIRSGFGSLIYVQ 159


>ref|XP_002306200.1| hypothetical protein POPTR_0004s18470g [Populus trichocarpa]
           gi|222849164|gb|EEE86711.1| hypothetical protein
           POPTR_0004s18470g [Populus trichocarpa]
          Length = 784

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/73 (35%), Positives = 41/73 (56%)
 Frame = -2

Query: 222 FLWNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHS 43
           F+WN  IR +   G   E++    RM  CE +  D F     ++ACG L +  +G+ +H 
Sbjct: 90  FIWNVIIRGYTNNGLFQEAIDFYYRME-CEGIRSDNFTFPFVIKACGELLALMVGQKVHG 148

Query: 42  LVVKLGFVLDVFV 4
            ++K+GF LDV+V
Sbjct: 149 KLIKIGFDLDVYV 161


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/73 (42%), Positives = 42/73 (57%)
 Frame = -2

Query: 222 FLWNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHS 43
           F WN+ I  + + G + ++L L  +M   E V  D F     L+ACGG+GS  IGE +H 
Sbjct: 123 FAWNSLISGYAELGLYEDALALYFQMEE-EGVEPDNFTFPRVLKACGGIGSIQIGEAVHR 181

Query: 42  LVVKLGFVLDVFV 4
            VV+ GF  DVFV
Sbjct: 182 HVVRSGFAGDVFV 194


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/73 (42%), Positives = 42/73 (57%)
 Frame = -2

Query: 222 FLWNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHS 43
           F WN+ I  + + G + ++L L  +M   E V  D F     L+ACGG+GS  IGE +H 
Sbjct: 123 FAWNSLISGYAELGLYEDALALYFQMEE-EGVEPDNFTFPRVLKACGGIGSIQIGEAVHR 181

Query: 42  LVVKLGFVLDVFV 4
            VV+ GF  DVFV
Sbjct: 182 HVVRSGFAGDVFV 194


>ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Solanum lycopersicum]
          Length = 911

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/71 (42%), Positives = 39/71 (54%)
 Frame = -2

Query: 216 WNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHSLV 37
           WN  I    Q GN  E+L LL  MRL E + +DT  +++ L  C  LG    G ++H  V
Sbjct: 302 WNAMISGFCQNGNATEALSLLDEMRL-EGIKMDTVTIAVVLPTCAQLGDVVHGMSIHLYV 360

Query: 36  VKLGFVLDVFV 4
           +K G  LDVFV
Sbjct: 361 IKHGLELDVFV 371


>gb|EXB96783.1| hypothetical protein L484_001891 [Morus notabilis]
          Length = 599

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/74 (43%), Positives = 42/74 (56%)
 Frame = -2

Query: 222 FLWNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHS 43
           FL+NT IR + Q G+  E   +L    L   V  + F    AL+AC GLGS ++G+T+H 
Sbjct: 90  FLFNTVIRAYAQTGDLKEKALVLYNAMLRCGVLPNKFTYPFALKACAGLGSLSLGQTVHG 149

Query: 42  LVVKLGFVLDVFVQ 1
             VK GF  DV VQ
Sbjct: 150 SAVKFGFDDDVHVQ 163


>ref|XP_006841618.1| hypothetical protein AMTR_s00003p00222920 [Amborella trichopoda]
           gi|548843639|gb|ERN03293.1| hypothetical protein
           AMTR_s00003p00222920 [Amborella trichopoda]
          Length = 578

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/64 (45%), Positives = 38/64 (59%)
 Frame = -2

Query: 216 WNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHSLV 37
           W T I    QRG H E++GL   MR  +S  +D+F  S  L ACG LGS  +G  +H+LV
Sbjct: 154 WTTMISGCTQRGLHREAIGLFLEMRQ-DSTNVDSFVCSATLVACGSLGSLILGTMIHALV 212

Query: 36  VKLG 25
           +K G
Sbjct: 213 IKCG 216


>ref|XP_006857627.1| hypothetical protein AMTR_s00061p00127300 [Amborella trichopoda]
           gi|548861723|gb|ERN19094.1| hypothetical protein
           AMTR_s00061p00127300 [Amborella trichopoda]
          Length = 430

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/74 (40%), Positives = 41/74 (55%)
 Frame = -2

Query: 222 FLWNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHS 43
           FLWN  IR + Q   + ++L L  +M+  E V  D F L   L+ C GL    +G  LH+
Sbjct: 194 FLWNAMIRSYSQHSYYEKTLELYVKMQE-EGVRPDGFTLPCVLKVCTGLSDLNVGRELHA 252

Query: 42  LVVKLGFVLDVFVQ 1
            + +LGF  DVFVQ
Sbjct: 253 QIFRLGFESDVFVQ 266


>emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
 Frame = -2

Query: 216 WNTFIRFHLQRGNHAESLGLLRRM-RLCES--VALDTFGLSLALQACGGLGSFTIGETLH 46
           WN+ I  + QRG + E+ GL   M   CE+  + +  F L+  L+ACGGLG   IG+ +H
Sbjct: 110 WNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVH 169

Query: 45  SLVVKLGFVLDVFV 4
              VK+GF  D+FV
Sbjct: 170 GYAVKIGFDSDLFV 183


>ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like isoform X1 [Solanum tuberosum]
           gi|565353132|ref|XP_006343489.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X2 [Solanum tuberosum]
           gi|565353134|ref|XP_006343490.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X3 [Solanum tuberosum]
           gi|565353136|ref|XP_006343491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like isoform X4 [Solanum tuberosum]
          Length = 831

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/71 (42%), Positives = 38/71 (53%)
 Frame = -2

Query: 216 WNTFIRFHLQRGNHAESLGLLRRMRLCESVALDTFGLSLALQACGGLGSFTIGETLHSLV 37
           WN  I    Q GN  E+L LL  MRL E + +DT  +++ L  C  LG    G  +H  V
Sbjct: 222 WNAMISGFCQNGNATEALSLLDEMRL-EGIKMDTVTIAVVLPICAQLGDIVHGLPIHLYV 280

Query: 36  VKLGFVLDVFV 4
           +K G  LDVFV
Sbjct: 281 IKHGLELDVFV 291