BLASTX nr result
ID: Zingiber24_contig00052239
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052239
(313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera] 117 2e-24
emb|CAN62499.1| hypothetical protein VITISV_000082 [Vitis vinifera] 114 1e-23
emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera] 110 2e-22
emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera] 106 4e-21
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] 99 6e-19
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 90 4e-16
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 89 8e-16
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 87 3e-15
ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Popu... 82 6e-14
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 82 6e-14
gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa] 82 6e-14
emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera] 82 7e-14
emb|CAN77998.1| hypothetical protein VITISV_002983 [Vitis vinifera] 82 7e-14
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 81 1e-13
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 81 2e-13
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 80 4e-13
ref|XP_004245423.1| PREDICTED: lipoyl synthase 1, mitochondrial-... 79 5e-13
gb|AFB73911.1| polyprotein [Citrus sinensis] 79 5e-13
emb|CAN83401.1| hypothetical protein VITISV_005673 [Vitis vinifera] 79 5e-13
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 79 6e-13
>emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]
Length = 215
Score = 117 bits (292), Expect = 2e-24
Identities = 54/74 (72%), Positives = 66/74 (89%), Gaps = 2/74 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSAIYLAKNQ+YHARTKHID+RFHKI+EL++ E+ LEKVHT++N DMLTKP+T E
Sbjct: 142 CDSQSAIYLAKNQVYHARTKHIDVRFHKIKELVSSGELLLEKVHTSENAADMLTKPVTIE 201
Query: 181 KF--CLNLIHISRC 216
KF CLNLI++S+C
Sbjct: 202 KFKHCLNLINVSKC 215
>emb|CAN62499.1| hypothetical protein VITISV_000082 [Vitis vinifera]
Length = 190
Score = 114 bits (285), Expect = 1e-23
Identities = 54/73 (73%), Positives = 65/73 (89%), Gaps = 2/73 (2%)
Frame = +1
Query: 4 DSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTEK 183
+SQSAIYLAKNQ+YHARTKHID+RFHKIREL++ E+ LEKVHT+ N DMLTKPITTEK
Sbjct: 118 ESQSAIYLAKNQVYHARTKHIDVRFHKIRELVSSGELLLEKVHTSKNATDMLTKPITTEK 177
Query: 184 F--CLNLIHISRC 216
F CLNL+++S+C
Sbjct: 178 FKHCLNLVNVSKC 190
>emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]
Length = 367
Score = 110 bits (275), Expect = 2e-22
Identities = 52/73 (71%), Positives = 63/73 (86%), Gaps = 2/73 (2%)
Frame = +1
Query: 4 DSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTEK 183
DSQSAIYL KNQ+YH RTKHID+RFHKI EL++ E+ LEKVHT++N DMLTKP+TT+K
Sbjct: 295 DSQSAIYLEKNQVYHPRTKHIDVRFHKISELVSSGELLLEKVHTSENAADMLTKPVTTKK 354
Query: 184 F--CLNLIHISRC 216
F CLNLI++SRC
Sbjct: 355 FKHCLNLINVSRC 367
>emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]
Length = 815
Score = 106 bits (264), Expect = 4e-21
Identities = 50/72 (69%), Positives = 62/72 (86%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSAIYLAKNQ+YH +TKHID+RFH IREL++ E+ LEKVHT++N +ML KPITT+
Sbjct: 742 CDSQSAIYLAKNQVYHVKTKHIDVRFHNIRELVSSGELLLEKVHTSENAANMLRKPITTK 801
Query: 181 KF--CLNLIHIS 210
KF CLNLI++S
Sbjct: 802 KFKHCLNLINVS 813
>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
Length = 406
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/67 (70%), Positives = 57/67 (85%), Gaps = 2/67 (2%)
Frame = +1
Query: 4 DSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTEK 183
D+QSAIYL KNQ+YHARTKHID+RFHKI EL++ E+ L+KVHT++N DMLTKP+TTEK
Sbjct: 339 DNQSAIYLEKNQVYHARTKHIDVRFHKISELVSSGELLLKKVHTSENAADMLTKPVTTEK 398
Query: 184 F--CLNL 198
F CL L
Sbjct: 399 FKHCLKL 405
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSAI+LAKNQ++HARTKHID R+H+IR+ + I +EKVHT DN D LTKP++ E
Sbjct: 1229 CDSQSAIHLAKNQVFHARTKHIDARYHRIRDWVEAGVIIVEKVHTDDNAADFLTKPVSVE 1288
Query: 181 KFCLNL 198
K+ L++
Sbjct: 1289 KYLLSI 1294
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CD+QSAI+LAKNQ +H R+KHID+R H +R++IA EI + KVHT DN DMLTK +
Sbjct: 1135 CDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVT 1194
Query: 181 KF--CLNLIHISRC 216
KF CLNLI++ C
Sbjct: 1195 KFKHCLNLINMGDC 1208
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CD+QSAI+LAKNQ YHARTKHID+++H +RE+I ++ L+K+ T DN DMLTK ++
Sbjct: 223 CDNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEV 282
Query: 181 KF--CLNLIHISR 213
KF CL LI I R
Sbjct: 283 KFQHCLKLIQILR 295
>ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Populus trichocarpa]
gi|550323083|gb|EEE98360.2| hypothetical protein
POPTR_0014s01150g [Populus trichocarpa]
Length = 905
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/68 (60%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSAI LAKNQ++H+RTKHID+RFH +RE++ +I L+K+ TADN DMLTK ++
Sbjct: 31 CDSQSAICLAKNQVHHSRTKHIDVRFHFVREIVDEGDILLQKIGTADNPADMLTKCVSGI 90
Query: 181 KF--CLNL 198
KF CL+L
Sbjct: 91 KFQHCLDL 98
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CD+QSAI+LAKNQ +H R+KHID+R H +R++IA EI + KV T DN DMLTK +
Sbjct: 662 CDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAVGEIGVGKVPTKDNPSDMLTKSLNVT 721
Query: 181 KF--CLNLIHI 207
KF CLNLI++
Sbjct: 722 KFKHCLNLINM 732
>gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]
Length = 353
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/68 (60%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSAI LAKNQ++H+RTKHID+RFH +RE++ +I L+K+ TADN DMLTK ++
Sbjct: 31 CDSQSAICLAKNQVHHSRTKHIDVRFHFVREIVDEGDILLQKIGTADNPADMLTKCVSGI 90
Query: 181 KF--CLNL 198
KF CL+L
Sbjct: 91 KFQHCLDL 98
>emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera]
Length = 104
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CD+QSAI+LAKNQ +H R KHID+R H +R++I +I + K+H DN DMLTK +
Sbjct: 31 CDNQSAIHLAKNQSFHERFKHIDVRLHFVRDIIIAGKIGVGKIHIEDNPSDMLTKSLNVT 90
Query: 181 KF--CLNLIHISRC 216
KF CLNL++I C
Sbjct: 91 KFNHCLNLVNIGDC 104
>emb|CAN77998.1| hypothetical protein VITISV_002983 [Vitis vinifera]
Length = 591
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITT- 177
CD+QSAIYL N M+H R KHID++ H +R++++ E+ +EK+HT DN DMLTK +TT
Sbjct: 518 CDNQSAIYLTXNTMFHERMKHIDVKLHFLRDVVSKDEVVVEKIHTNDNPXDMLTKALTTI 577
Query: 178 -EKFCLNLIHI 207
K CL+LI+I
Sbjct: 578 KSKHCLSLINI 588
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSA+ L KNQ +H RTKHID+RFH IR++ + + K+ T DN DMLTKPI+
Sbjct: 866 CDSQSALCLTKNQGFHERTKHIDVRFHFIRDIAEQGLVNVSKISTKDNPADMLTKPISKV 925
Query: 181 KF--CLNLIHI 207
KF CLNLI++
Sbjct: 926 KFKQCLNLINV 936
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSAI L KNQM+H RTKHIDMR+H IR +IA ++++ K+ T DN DM+TKP+
Sbjct: 935 CDSQSAICLTKNQMFHERTKHIDMRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPAT 994
Query: 181 KF--CLNLIHI 207
KF C +L+ +
Sbjct: 995 KFELCSSLVGV 1005
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/72 (51%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSAI L K+QM+H RTKHID+R+H IR +IA ++++ K+ T DN +DM+TKP+
Sbjct: 1169 CDSQSAICLTKDQMFHERTKHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVPAT 1228
Query: 181 KF--CLNLIHIS 210
KF C +L+ ++
Sbjct: 1229 KFELCSSLVGVT 1240
>ref|XP_004245423.1| PREDICTED: lipoyl synthase 1, mitochondrial-like [Solanum
lycopersicum]
Length = 313
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSAI L+KN MYHARTK ID+R+H IRE + L+K+HT++N DMLTK I +
Sbjct: 83 CDSQSAIDLSKNSMYHARTKQIDVRYHWIREEVESESFDLKKIHTSENPADMLTKMIPKD 142
Query: 181 KF--CLNLI 201
KF C L+
Sbjct: 143 KFELCKELV 151
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 79.3 bits (194), Expect = 5e-13
Identities = 31/62 (50%), Positives = 50/62 (80%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSA+++A+N +H+RTKHI +++H +RE++ + L+K+HT +N+ D+LTKPI T+
Sbjct: 1236 CDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKPINTD 1295
Query: 181 KF 186
KF
Sbjct: 1296 KF 1297
>emb|CAN83401.1| hypothetical protein VITISV_005673 [Vitis vinifera]
Length = 209
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/71 (47%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CD++SAI+L KNQM+H +TKHID+R + ++ ++ EIQ+ K+H DN++DMLTK +
Sbjct: 136 CDNKSAIHLTKNQMFHEKTKHIDVRMNFVKNILTKGEIQVVKIHIEDNLVDMLTKSVIVA 195
Query: 181 KF--CLNLIHI 207
KF CL+L+ +
Sbjct: 196 KFKHCLDLVQV 206
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 79.0 bits (193), Expect = 6e-13
Identities = 30/62 (48%), Positives = 50/62 (80%)
Frame = +1
Query: 1 CDSQSAIYLAKNQMYHARTKHIDMRFHKIRELIAFREIQLEKVHTADNVIDMLTKPITTE 180
CDSQSA+++A+N +H+RTKHI +++H +RE++ + ++K+HT DN+ D++TKPI T+
Sbjct: 1232 CDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQKIHTNDNLADVMTKPINTD 1291
Query: 181 KF 186
KF
Sbjct: 1292 KF 1293