BLASTX nr result
ID: Zingiber24_contig00052225
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052225
(335 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517612.1| pentatricopeptide repeat-containing protein,... 118 9e-25
ref|XP_004236463.1| PREDICTED: pentatricopeptide repeat-containi... 116 3e-24
ref|XP_006364204.1| PREDICTED: pentatricopeptide repeat-containi... 112 4e-23
ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas] 110 1e-22
ref|XP_006837809.1| hypothetical protein AMTR_s00104p00122950 [A... 109 4e-22
ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
gb|EMT09947.1| hypothetical protein F775_06525 [Aegilops tauschii] 107 2e-21
ref|XP_002326537.1| predicted protein [Populus trichocarpa] gi|5... 105 5e-21
ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containi... 105 8e-21
ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|XP_006427243.1| hypothetical protein CICLE_v100249422mg, par... 103 2e-20
ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
gb|ESW22733.1| hypothetical protein PHAVU_005G176600g [Phaseolus... 102 4e-20
ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|XP_004978397.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
gb|EXB67318.1| hypothetical protein L484_025800 [Morus notabilis] 100 3e-19
gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japo... 99 4e-19
emb|CBX24404.1| hypothetical_protein [Oryza glaberrima] 99 6e-19
ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [S... 99 6e-19
>ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543244|gb|EEF44776.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 794
Score = 118 bits (295), Expect = 9e-25
Identities = 50/108 (46%), Positives = 77/108 (71%)
Frame = -2
Query: 334 IRNRNVEHQLEHPVFSVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKG 155
I N+ E V F M+ DGW+ + A+YN+I+ CLC+H M+++AL LRDKM+ KG
Sbjct: 645 ISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKG 704
Query: 154 YLPDSLTFLFLLHGVCALGKSKEWNNILSCQFQQNELEVAVKYATFID 11
+LPD ++ + LLHG+C G+S++WNN++SC+ + EL+VAVKY+ +D
Sbjct: 705 FLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLD 752
>ref|XP_004236463.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Solanum lycopersicum]
Length = 828
Score = 116 bits (291), Expect = 3e-24
Identities = 51/94 (54%), Positives = 68/94 (72%)
Frame = -2
Query: 289 SVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLHGV 110
++F+ M+ DGW+ + AAYN+II LC H ML+ AL+LRDKM+ KGY DS+TF LLHG+
Sbjct: 698 AIFKRMISDGWHPRNAAYNSIITSLCLHKMLKTALQLRDKMISKGYTTDSVTFAALLHGI 757
Query: 109 CALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
C GKSKEW +I+SC EL VA+KY+ D+
Sbjct: 758 CLNGKSKEWKSIISCSLSATELSVALKYSLIFDQ 791
>ref|XP_006364204.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like isoform X1 [Solanum tuberosum]
gi|565397234|ref|XP_006364205.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g52620-like isoform X2 [Solanum tuberosum]
Length = 816
Score = 112 bits (281), Expect = 4e-23
Identities = 49/103 (47%), Positives = 69/103 (66%)
Frame = -2
Query: 316 EHQLEHPVFSVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSL 137
+ ++ + F+ M+ DGW+ + AAYN+II LC H ML+ AL+LRDKM+ KGY DS+
Sbjct: 691 QDEMNSKFMATFKRMISDGWHPRNAAYNSIITSLCLHKMLKTALQLRDKMISKGYTTDSV 750
Query: 136 TFLFLLHGVCALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
TF LLHG+C GK+KEW +I+SC EL A+KY+ D+
Sbjct: 751 TFAALLHGICLDGKAKEWKSIISCSLSATELSFALKYSLIFDQ 793
>ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 112 bits (279), Expect = 7e-23
Identities = 47/92 (51%), Positives = 69/92 (75%)
Frame = -2
Query: 283 FRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLHGVCA 104
F M+ DGW ++AAYN+I+ CLC++ M R AL+L +KM KG +PDS++F+ LLHGVC
Sbjct: 696 FGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCL 755
Query: 103 LGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
G+SKEW NI+SC + EL++AV Y++ +D+
Sbjct: 756 EGRSKEWKNIVSCNLNERELQIAVNYSSILDQ 787
>dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 110 bits (276), Expect = 1e-22
Identities = 43/92 (46%), Positives = 70/92 (76%)
Frame = -2
Query: 283 FRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLHGVCA 104
F M+ DGW+ + AAYN+I+ CLC+H M++ AL+L DKM+ KG+ PD ++F+ LLHG+C
Sbjct: 691 FGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCL 750
Query: 103 LGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
G+ ++WNN++ C F + +L++AVKY+ +D+
Sbjct: 751 EGRLQDWNNVIPCNFNERQLQIAVKYSEKLDQ 782
>ref|XP_006837809.1| hypothetical protein AMTR_s00104p00122950 [Amborella trichopoda]
gi|548840175|gb|ERN00378.1| hypothetical protein
AMTR_s00104p00122950 [Amborella trichopoda]
Length = 706
Score = 109 bits (272), Expect = 4e-22
Identities = 52/94 (55%), Positives = 65/94 (69%)
Frame = -2
Query: 283 FRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLHGVCA 104
F M L+GW+ KTAAYNAII CLC ML AL+LRDKM KG PDS+TF LLHG+C
Sbjct: 584 FMCMELEGWDTKTAAYNAIILCLCHSKMLGLALKLRDKMGGKGLTPDSVTFASLLHGICF 643
Query: 103 LGKSKEWNNILSCQFQQNELEVAVKYATFIDELW 2
G+S EW+ ILSC F+ EL A++Y+ D+ +
Sbjct: 644 EGRSNEWDKILSCGFESEELHAALRYSILFDKYY 677
>ref|XP_006465489.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
[Citrus sinensis]
Length = 1259
Score = 107 bits (268), Expect = 1e-21
Identities = 47/97 (48%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = -2
Query: 310 QLEHPVF-SVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLT 134
++ P+F F M+ DGW AAYN+II CLC H M++ AL+L DKM+ KG+L D ++
Sbjct: 1130 EINKPIFLEFFERMISDGWGHMAAAYNSIIICLCCHGMVKVALQLHDKMMSKGFLQDPIS 1189
Query: 133 FLFLLHGVCALGKSKEWNNILSCQFQQNELEVAVKYA 23
F LLHG+C GKSKEW N + C + EL+++VKY+
Sbjct: 1190 FAALLHGICLEGKSKEWTNFIPCILNEKELQISVKYS 1226
>gb|EMT09947.1| hypothetical protein F775_06525 [Aegilops tauschii]
Length = 850
Score = 107 bits (266), Expect = 2e-21
Identities = 47/96 (48%), Positives = 70/96 (72%)
Frame = -2
Query: 295 VFSVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLH 116
+ +FR +V W+ AAYNAIIF LC+H ML NAL++ +KM KGY PDS+TF+ LL+
Sbjct: 721 LLDIFRGLVNGNWDPGNAAYNAIIFSLCRHNMLGNALDIINKMANKGYSPDSVTFIALLY 780
Query: 115 GVCALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
G C++GKS++W +IL +F+Q++LE+A +Y D+
Sbjct: 781 GFCSVGKSRDWRSILPNEFRQDQLEIASRYKILFDQ 816
>ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|566146735|ref|XP_006368374.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550346285|gb|ERP64943.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 826
Score = 105 bits (263), Expect = 5e-21
Identities = 44/87 (50%), Positives = 63/87 (72%)
Frame = -2
Query: 283 FRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLHGVCA 104
FR M+ DGW + AAYN+++ CLC H M+ AL+LRDKM KG PD ++F L++G+C
Sbjct: 697 FRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCL 756
Query: 103 LGKSKEWNNILSCQFQQNELEVAVKYA 23
G+SKEW N +SC+ + EL++AVKY+
Sbjct: 757 EGRSKEWKNTISCKLNEWELQIAVKYS 783
>ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
[Cucumis sativus] gi|449484425|ref|XP_004156880.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 105 bits (261), Expect = 8e-21
Identities = 47/109 (43%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Frame = -2
Query: 331 RNRNVEHQLEHPVFS-VFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKG 155
R N H+ +F F M+ DGW K AAYN I+ CLC+ M++ AL+LR+KML G
Sbjct: 683 REPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFG 742
Query: 154 YLPDSLTFLFLLHGVCALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
D+++F+ L+HG+C G SKEW N++SC + EL++A+KY+ +D+
Sbjct: 743 LCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDK 791
>ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like
[Brachypodium distachyon]
Length = 877
Score = 104 bits (259), Expect = 1e-20
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = -2
Query: 295 VFSVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLH 116
+ +FR +V D + + +AYNAIIF LC H ML AL+L++KM KGY PDS TFL LL+
Sbjct: 748 LLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLY 807
Query: 115 GVCALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
G C++GKS+EW IL +FQ++ELEVA +Y D+
Sbjct: 808 GFCSVGKSREWRTILPNEFQRDELEVASRYKILFDQ 843
>ref|XP_006427243.1| hypothetical protein CICLE_v100249422mg, partial [Citrus
clementina] gi|557529233|gb|ESR40483.1| hypothetical
protein CICLE_v100249422mg, partial [Citrus clementina]
Length = 485
Score = 103 bits (258), Expect = 2e-20
Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = -2
Query: 310 QLEHPVF-SVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLT 134
++ P+F F M+ DGW AAYN+II LC H M++ AL+L DKM+ KG+L D ++
Sbjct: 356 EINKPIFLEFFERMISDGWGHMAAAYNSIIISLCCHGMVKVALQLHDKMMSKGFLQDPIS 415
Query: 133 FLFLLHGVCALGKSKEWNNILSCQFQQNELEVAVKYA 23
F LLHG+C GKSKEW N + C + EL+++VKY+
Sbjct: 416 FAALLHGICLEGKSKEWTNFIPCILNEKELQISVKYS 452
>ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 103 bits (257), Expect = 2e-20
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = -2
Query: 295 VFSVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLH 116
+ F M+LDGW+ AAYN++I CLCKH + A L KML KG+L DS+ F LLH
Sbjct: 693 ILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLH 752
Query: 115 GVCALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
G+C GKSKEW NI+SC + EL+ AVKY+ +D+
Sbjct: 753 GLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDK 788
>gb|ESW22733.1| hypothetical protein PHAVU_005G176600g [Phaseolus vulgaris]
Length = 820
Score = 102 bits (255), Expect = 4e-20
Identities = 51/96 (53%), Positives = 64/96 (66%)
Frame = -2
Query: 295 VFSVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLH 116
V F M+LD AAYN+II CLCKH M+ AL L+ KML KG+L DS+ F LLH
Sbjct: 689 VLDFFTMMILDEREPVIAAYNSIIVCLCKHGMVDTALLLQTKMLNKGFLVDSVCFTALLH 748
Query: 115 GVCALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
G+C GKSKEW NI+SC + EL+ AVKY+ +D+
Sbjct: 749 GLCQKGKSKEWRNIISCDLSKIELQTAVKYSLTLDK 784
>ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 101 bits (251), Expect = 1e-19
Identities = 47/96 (48%), Positives = 64/96 (66%)
Frame = -2
Query: 295 VFSVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLH 116
+ F M+ +GW+ AAYN++I CLCKH M+ A L KML KG+L DS+ F +LH
Sbjct: 689 ILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLH 748
Query: 115 GVCALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
G+C GKSKEW NI+SC + EL+ AVKY+ +D+
Sbjct: 749 GLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDK 784
>ref|XP_004978397.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Setaria italica]
Length = 705
Score = 100 bits (250), Expect = 2e-19
Identities = 45/99 (45%), Positives = 67/99 (67%)
Frame = -2
Query: 304 EHPVFSVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLF 125
++ + VF+ +V DGW+ + +AYNAIIF LC+H ML AL+L+DKM+ KGY D +TFL
Sbjct: 573 KNALLDVFKGLVSDGWDPRISAYNAIIFSLCRHNMLGKALDLKDKMVSKGYSSDPITFLS 632
Query: 124 LLHGVCALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
L +G C +GK + W +IL +FQ+NE E + +D+
Sbjct: 633 LPYGFCFVGKPRNWGSILPNEFQKNEFETIFRCKMLLDQ 671
>gb|EXB67318.1| hypothetical protein L484_025800 [Morus notabilis]
Length = 811
Score = 99.8 bits (247), Expect = 3e-19
Identities = 43/89 (48%), Positives = 63/89 (70%)
Frame = -2
Query: 274 MVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLHGVCALGK 95
M+ DGW TAAYN+I+ CLC++ M+R AL+LRDKM+ G DS++F LLHG+C +
Sbjct: 693 MISDGWVPSTAAYNSILICLCQYGMVRTALQLRDKMISSGMFLDSVSFASLLHGLCMEER 752
Query: 94 SKEWNNILSCQFQQNELEVAVKYATFIDE 8
S+EW NI+ C + EL+ A+KY+ +D+
Sbjct: 753 SQEWKNIIPCDLNEQELQAALKYSLKMDQ 781
>gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 99.4 bits (246), Expect = 4e-19
Identities = 44/93 (47%), Positives = 65/93 (69%)
Frame = -2
Query: 286 VFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLHGVC 107
VF+ +V D + + +AYNAIIF LC+H MLR AL+ +++M +KGY+P+ +TFL LL+G C
Sbjct: 696 VFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFC 755
Query: 106 ALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
++GKS W IL +FQQ E E+ +Y D+
Sbjct: 756 SVGKSMNWRTILPNEFQQEEFEIIFRYKFLFDQ 788
>emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/93 (47%), Positives = 65/93 (69%)
Frame = -2
Query: 286 VFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLHGVC 107
VF+ +V D + + +AYNAIIF LC+H MLR AL+ +++M +KGY+P+ +TFL LL+G C
Sbjct: 1639 VFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFC 1698
Query: 106 ALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
++GKS W IL +FQQ E E+ +Y D+
Sbjct: 1699 SVGKSVNWRTILPNEFQQEEFEIIFRYKFLFDQ 1731
>ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein
SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/96 (46%), Positives = 68/96 (70%)
Frame = -2
Query: 295 VFSVFRNMVLDGWNLKTAAYNAIIFCLCKHLMLRNALELRDKMLEKGYLPDSLTFLFLLH 116
+ VF+ ++ DG + + +AYNAIIF LC+H ML A+EL++KM KG LPD +TFL LL+
Sbjct: 765 LLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLY 824
Query: 115 GVCALGKSKEWNNILSCQFQQNELEVAVKYATFIDE 8
G ++GKS +W + L +FQQ+E E+ KY T +++
Sbjct: 825 GFSSVGKSGKWRSALPNEFQQDEFEIICKYMTLLNQ 860