BLASTX nr result
ID: Zingiber24_contig00052138
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052138
(310 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344627.1| PREDICTED: DNA polymerase zeta catalytic sub... 123 2e-26
ref|XP_006472032.1| PREDICTED: DNA polymerase zeta catalytic sub... 122 6e-26
ref|XP_006433339.1| hypothetical protein CICLE_v10003639mg [Citr... 122 6e-26
ref|XP_002461173.1| hypothetical protein SORBIDRAFT_02g042330 [S... 120 1e-25
ref|XP_004494955.1| PREDICTED: DNA polymerase zeta catalytic sub... 119 3e-25
ref|XP_004958624.1| PREDICTED: DNA polymerase zeta catalytic sub... 117 2e-24
emb|CBI36804.3| unnamed protein product [Vitis vinifera] 117 2e-24
ref|XP_006658948.1| PREDICTED: DNA polymerase zeta catalytic sub... 116 3e-24
ref|NP_001060584.1| Os07g0669000 [Oryza sativa Japonica Group] g... 116 4e-24
gb|EEC82654.1| hypothetical protein OsI_27267 [Oryza sativa Indi... 116 4e-24
ref|XP_003562494.1| PREDICTED: DNA polymerase zeta catalytic sub... 115 6e-24
ref|XP_006855469.1| hypothetical protein AMTR_s00057p00185570 [A... 115 8e-24
ref|XP_006300642.1| hypothetical protein CARUB_v10019649mg [Caps... 114 1e-23
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab... 114 1e-23
ref|XP_006391268.1| hypothetical protein EUTSA_v10017996mg [Eutr... 113 3e-23
gb|EMJ07643.1| hypothetical protein PRUPE_ppa000111mg [Prunus pe... 112 4e-23
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from... 112 7e-23
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic ... 112 7e-23
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia... 112 7e-23
ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis tha... 112 7e-23
>ref|XP_006344627.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X1
[Solanum tuberosum]
Length = 1976
Score = 123 bits (309), Expect = 2e-26
Identities = 54/90 (60%), Positives = 68/90 (75%)
Frame = -2
Query: 288 FTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVLPFF 109
F++RIVS+DYYM AP+PGFDICYS+ G V EVPVIR++G TP GQK CLH+HG LP+F
Sbjct: 11 FSVRIVSIDYYMTAPLPGFDICYSTFQGGRVNEVPVIRVYGATPGGQKTCLHLHGALPYF 70
Query: 108 YIPFPDELLQSSKEGDQYMKALMTALEKAL 19
Y+P + LQS ++G + AL ALEK L
Sbjct: 71 YVPCSELFLQSDEKGSECTNALALALEKVL 100
>ref|XP_006472032.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X1
[Citrus sinensis]
Length = 1808
Score = 122 bits (305), Expect = 6e-26
Identities = 56/93 (60%), Positives = 69/93 (74%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
+ LF++RIVS+D+YM PIPG+DICYSS G V EVPVIR++G TPAGQK CLHIH L
Sbjct: 8 SNLFSVRIVSIDHYMAPPIPGYDICYSSFQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ Y+P D +Q +E D YM A+ ALEKAL
Sbjct: 68 PYLYVPCADIPVQLRQEDDGYMHAISLALEKAL 100
>ref|XP_006433339.1| hypothetical protein CICLE_v10003639mg [Citrus clementina]
gi|557535461|gb|ESR46579.1| hypothetical protein
CICLE_v10003639mg [Citrus clementina]
Length = 1741
Score = 122 bits (305), Expect = 6e-26
Identities = 56/93 (60%), Positives = 69/93 (74%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
+ LF++RIVS+D+YM PIPG+DICYSS G V EVPVIR++G TPAGQK CLHIH L
Sbjct: 8 SNLFSVRIVSIDHYMAPPIPGYDICYSSFQGGKVNEVPVIRVYGSTPAGQKTCLHIHRAL 67
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ Y+P D +Q +E D YM A+ ALEKAL
Sbjct: 68 PYLYVPCADIPVQLRQEDDGYMHAISLALEKAL 100
>ref|XP_002461173.1| hypothetical protein SORBIDRAFT_02g042330 [Sorghum bicolor]
gi|241924550|gb|EER97694.1| hypothetical protein
SORBIDRAFT_02g042330 [Sorghum bicolor]
Length = 1714
Score = 120 bits (302), Expect = 1e-25
Identities = 55/91 (60%), Positives = 70/91 (76%)
Frame = -2
Query: 291 LFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVLPF 112
+ ++RIVSLDYYM P+PGF S G V+EVPV+RI+G TPAGQK CLHIH VLP+
Sbjct: 18 VLSVRIVSLDYYMAPPLPGFGFSRSPFHGDGVEEVPVVRIYGSTPAGQKTCLHIHRVLPY 77
Query: 111 FYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
FYIP P+ELL + ++GD Y+ L++ALEKAL
Sbjct: 78 FYIPCPEELLDNLEKGDSYITGLLSALEKAL 108
>ref|XP_004494955.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Cicer
arietinum]
Length = 1914
Score = 119 bits (299), Expect = 3e-25
Identities = 54/91 (59%), Positives = 66/91 (72%)
Frame = -2
Query: 291 LFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVLPF 112
+F++RIV++DYYM PIP DICYSS G V EVPVIR++G TPAGQK CLHIHG LP+
Sbjct: 10 IFSVRIVTIDYYMAPPIPSIDICYSSFHGGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69
Query: 111 FYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
Y+P D LQ +EGD Y + +LEKAL
Sbjct: 70 LYVPCSDIPLQLDQEGDAYTYMVAASLEKAL 100
>ref|XP_004958624.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Setaria
italica]
Length = 1805
Score = 117 bits (293), Expect = 2e-24
Identities = 53/93 (56%), Positives = 69/93 (74%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
T + ++RIVS+DYYM P+PGFD S G V+EVPVIRI+G TPAGQK CLHIH VL
Sbjct: 16 TPVLSVRIVSIDYYMAPPLPGFDFSRSPFHGEEVEEVPVIRIYGSTPAGQKTCLHIHRVL 75
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ Y+P P+ELL + +G+ Y+ L++ LEKAL
Sbjct: 76 PYLYVPCPEELLYNVDKGNSYITGLLSDLEKAL 108
>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 117 bits (292), Expect = 2e-24
Identities = 53/91 (58%), Positives = 65/91 (71%)
Frame = -2
Query: 291 LFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVLPF 112
+F++RIVS+DYYM PIP DICYSS G VKEVPVIRI+G TP GQK CLH+H LP+
Sbjct: 10 IFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQKTCLHVHRALPY 69
Query: 111 FYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
Y+P D + QS +E D Y A+ +EKAL
Sbjct: 70 LYVPCTDLMPQSPQEADTYTHAVSLGVEKAL 100
>ref|XP_006658948.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Oryza
brachyantha]
Length = 167
Score = 116 bits (291), Expect = 3e-24
Identities = 52/91 (57%), Positives = 67/91 (73%)
Frame = -2
Query: 291 LFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVLPF 112
+ ++RIVSLDYYM P+PGFD YS G V+EVPVIRI+G TPAGQK CLHIH VLPF
Sbjct: 20 VLSVRIVSLDYYMAPPLPGFDFSYSQFHGAEVEEVPVIRIYGSTPAGQKTCLHIHRVLPF 79
Query: 111 FYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
Y+P ++ L ++G+ Y+ L++ LEKAL
Sbjct: 80 LYVPCTEDFLHDIEKGNSYISGLLSDLEKAL 110
>ref|NP_001060584.1| Os07g0669000 [Oryza sativa Japonica Group]
gi|34395195|dbj|BAC83595.1| DNA polymerase zeta
catalytic subunit-like protein [Oryza sativa Japonica
Group] gi|113612120|dbj|BAF22498.1| Os07g0669000 [Oryza
sativa Japonica Group] gi|215708854|dbj|BAG94123.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 146
Score = 116 bits (290), Expect = 4e-24
Identities = 52/91 (57%), Positives = 69/91 (75%)
Frame = -2
Query: 291 LFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVLPF 112
+ ++RIVSLDYYM P+PGFD YS G V+EVPVIRI+G TPAGQK CLHIH VLPF
Sbjct: 17 VLSVRIVSLDYYMAPPLPGFDFSYSHFHGGEVEEVPVIRIYGSTPAGQKTCLHIHRVLPF 76
Query: 111 FYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
Y+P ++LL + ++G+ ++ L++ LEKAL
Sbjct: 77 LYVPCKEDLLHNVEKGNSFISGLLSDLEKAL 107
>gb|EEC82654.1| hypothetical protein OsI_27267 [Oryza sativa Indica Group]
gi|222637649|gb|EEE67781.1| hypothetical protein
OsJ_25510 [Oryza sativa Japonica Group]
Length = 1797
Score = 116 bits (290), Expect = 4e-24
Identities = 52/91 (57%), Positives = 69/91 (75%)
Frame = -2
Query: 291 LFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVLPF 112
+ ++RIVSLDYYM P+PGFD YS G V+EVPVIRI+G TPAGQK CLHIH VLPF
Sbjct: 17 VLSVRIVSLDYYMAPPLPGFDFSYSHFHGGEVEEVPVIRIYGSTPAGQKTCLHIHRVLPF 76
Query: 111 FYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
Y+P ++LL + ++G+ ++ L++ LEKAL
Sbjct: 77 LYVPCKEDLLHNVEKGNSFISGLLSDLEKAL 107
>ref|XP_003562494.1| PREDICTED: DNA polymerase zeta catalytic subunit-like [Brachypodium
distachyon]
Length = 1720
Score = 115 bits (288), Expect = 6e-24
Identities = 51/91 (56%), Positives = 67/91 (73%)
Frame = -2
Query: 291 LFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVLPF 112
+ ++RIVSLDYYM P+PGFD YS V+EVPVIRI+G TPAGQK CLH+H LP+
Sbjct: 16 VLSVRIVSLDYYMAPPLPGFDFTYSPFHCEEVEEVPVIRIYGSTPAGQKTCLHVHQALPY 75
Query: 111 FYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
Y+P+P+ELL + + G+ M L++ LEKAL
Sbjct: 76 LYVPYPEELLHNIERGNSCMTGLLSDLEKAL 106
>ref|XP_006855469.1| hypothetical protein AMTR_s00057p00185570 [Amborella trichopoda]
gi|548859235|gb|ERN16936.1| hypothetical protein
AMTR_s00057p00185570 [Amborella trichopoda]
Length = 2047
Score = 115 bits (287), Expect = 8e-24
Identities = 52/97 (53%), Positives = 71/97 (73%)
Frame = -2
Query: 309 DPS*TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHI 130
+P + +F++RIVSLDYY PIP DICY++ G+ V EVPVIR++G T AGQK CLH+
Sbjct: 26 EPGSSNVFSVRIVSLDYYTAPPIPEVDICYNNFLGQEVAEVPVIRVYGSTLAGQKTCLHV 85
Query: 129 HGVLPFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
H V P+ YIP+ D+L Q+ +EG Y + L +A+EKAL
Sbjct: 86 HQVFPYLYIPYDDDLSQAPQEGLAYTRLLASAIEKAL 122
>ref|XP_006300642.1| hypothetical protein CARUB_v10019649mg [Capsella rubella]
gi|482569352|gb|EOA33540.1| hypothetical protein
CARUB_v10019649mg [Capsella rubella]
Length = 1900
Score = 114 bits (286), Expect = 1e-23
Identities = 54/93 (58%), Positives = 67/93 (72%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
+ +F++RIV++DYYM +PIPG+DICYSS G V EVPVIRI+G TPAGQK CLHIH L
Sbjct: 8 SNVFSLRIVTIDYYMASPIPGYDICYSSFQGGEVNEVPVIRIYGSTPAGQKTCLHIHRAL 67
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ YIPF + L+ K D A+ LEKAL
Sbjct: 68 PYLYIPFSEIPLEQRKGVDGSTLAVSLELEKAL 100
>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
Length = 1899
Score = 114 bits (286), Expect = 1e-23
Identities = 55/93 (59%), Positives = 66/93 (70%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
+ +F++RIVS+DYYM +PIPG+DICYSS G V EVPVIRI+G TPAGQK CLHIH L
Sbjct: 8 SNVFSLRIVSIDYYMASPIPGYDICYSSFQGGEVNEVPVIRIYGSTPAGQKTCLHIHRAL 67
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ YIP + L+ K D AL LEKAL
Sbjct: 68 PYLYIPCSEIPLEHHKGADGSTLALSLELEKAL 100
>ref|XP_006391268.1| hypothetical protein EUTSA_v10017996mg [Eutrema salsugineum]
gi|557087702|gb|ESQ28554.1| hypothetical protein
EUTSA_v10017996mg [Eutrema salsugineum]
Length = 1887
Score = 113 bits (282), Expect = 3e-23
Identities = 54/93 (58%), Positives = 66/93 (70%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
+ +F++RIVS+DYYM +PIPGFDICYSS G V EVPVIRI+G TPAGQK CLHIH +
Sbjct: 8 SNVFSLRIVSIDYYMASPIPGFDICYSSFQGGQVNEVPVIRIYGSTPAGQKTCLHIHRAI 67
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ YIP + L K D + A+ LEKAL
Sbjct: 68 PYLYIPCSEIPLDHHKGVDGNIPAVSLELEKAL 100
>gb|EMJ07643.1| hypothetical protein PRUPE_ppa000111mg [Prunus persica]
Length = 1771
Score = 112 bits (281), Expect = 4e-23
Identities = 53/90 (58%), Positives = 63/90 (70%)
Frame = -2
Query: 288 FTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVLPFF 109
F++RIVS+DYYM PIPG DI YSS G V EVPVIRIFG TPAGQK CLHIH LP+
Sbjct: 7 FSVRIVSVDYYMAPPIPGVDISYSSFQGGKVNEVPVIRIFGSTPAGQKTCLHIHRALPYL 66
Query: 108 YIPFPDELLQSSKEGDQYMKALMTALEKAL 19
Y+P D +Q ++GD Y + +EKAL
Sbjct: 67 YVPCADIPIQLHEKGDSYTHDMSLLIEKAL 96
>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 112 bits (279), Expect = 7e-23
Identities = 54/93 (58%), Positives = 66/93 (70%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
+ +F++RIVS+DYYM +PIPG++ICYSS G V EVPVIRI+G TPAGQK CLHIH L
Sbjct: 8 SNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRAL 67
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ YIP + L+ K D AL LEKAL
Sbjct: 68 PYLYIPCSEIPLEHHKGVDGSTLALSLELEKAL 100
>gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis
thaliana]
Length = 1871
Score = 112 bits (279), Expect = 7e-23
Identities = 54/93 (58%), Positives = 66/93 (70%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
+ +F++RIVS+DYYM +PIPG++ICYSS G V EVPVIRI+G TPAGQK CLHIH L
Sbjct: 8 SNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRAL 67
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ YIP + L+ K D AL LEKAL
Sbjct: 68 PYLYIPCSEIPLEHHKGVDGSTLALSLELEKAL 100
>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|75138548|sp|Q766Z3.1|REV3_ARATH RecName: Full=DNA
polymerase zeta catalytic subunit; AltName: Full=Protein
reversionless 3-like; Short=AtREV3
gi|34330129|dbj|BAC82450.1| catalytic subunit of
polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
[Arabidopsis thaliana]
Length = 1890
Score = 112 bits (279), Expect = 7e-23
Identities = 54/93 (58%), Positives = 66/93 (70%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
+ +F++RIVS+DYYM +PIPG++ICYSS G V EVPVIRI+G TPAGQK CLHIH L
Sbjct: 8 SNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRAL 67
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ YIP + L+ K D AL LEKAL
Sbjct: 68 PYLYIPCSEIPLEHHKGVDGSTLALSLELEKAL 100
>ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit
[Arabidopsis thaliana]
Length = 1916
Score = 112 bits (279), Expect = 7e-23
Identities = 54/93 (58%), Positives = 66/93 (70%)
Frame = -2
Query: 297 TTLFTIRIVSLDYYMEAPIPGFDICYSSLDGRSVKEVPVIRIFGPTPAGQKACLHIHGVL 118
+ +F++RIVS+DYYM +PIPG++ICYSS G V EVPVIRI+G TPAGQK CLHIH L
Sbjct: 8 SNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTCLHIHRAL 67
Query: 117 PFFYIPFPDELLQSSKEGDQYMKALMTALEKAL 19
P+ YIP + L+ K D AL LEKAL
Sbjct: 68 PYLYIPCSEIPLEHHKGVDGSTLALSLELEKAL 100