BLASTX nr result

ID: Zingiber24_contig00052090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00052090
         (294 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA57166.1| TPA: NHL25, mRNA [Zea mays]                            57   3e-06
tpg|DAA57165.1| TPA: NHL25 [Zea mays]                                  57   3e-06
ref|NP_001044593.1| Os01g0812100 [Oryza sativa Japonica Group] g...    56   6e-06
gb|EAY76236.1| hypothetical protein OsI_04172 [Oryza sativa Indi...    56   6e-06
ref|NP_001147210.1| NHL25 [Zea mays] gi|195608538|gb|ACG26099.1|...    55   1e-05

>tpg|DAA57166.1| TPA: NHL25, mRNA [Zea mays]
          Length = 418

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = -3

Query: 136 PAPELGTFVVQVAKD*IYRVPPPENADLVERYCKRSNIRRRSPC 5
           P P  GT+VVQV KD ++RVPPPENA L + Y +R+  RRR  C
Sbjct: 181 PPPPAGTYVVQVPKDKVFRVPPPENARLFDHYTRRARRRRRGSC 224


>tpg|DAA57165.1| TPA: NHL25 [Zea mays]
          Length = 306

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/44 (56%), Positives = 31/44 (70%)
 Frame = -3

Query: 136 PAPELGTFVVQVAKD*IYRVPPPENADLVERYCKRSNIRRRSPC 5
           P P  GT+VVQV KD ++RVPPPENA L + Y +R+  RRR  C
Sbjct: 69  PPPPAGTYVVQVPKDKVFRVPPPENARLFDHYTRRARRRRRGSC 112


>ref|NP_001044593.1| Os01g0812100 [Oryza sativa Japonica Group]
           gi|18844773|dbj|BAB85244.1| harpin-induced
           protein-related-like [Oryza sativa Japonica Group]
           gi|20161461|dbj|BAB90385.1| P0432B10.3 [Oryza sativa
           Japonica Group] gi|113534124|dbj|BAF06507.1|
           Os01g0812100 [Oryza sativa Japonica Group]
          Length = 312

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -3

Query: 139 VPAPELGTFVVQVAKD*IYRVPPPENADLVERYCKRSNIRRRSPC 5
           +PAP+ GT+VVQ+ KD ++RVPPPENA L + Y +R+  R R  C
Sbjct: 64  LPAPQPGTYVVQMPKDKVFRVPPPENARLFQHYTRRARRRARCSC 108


>gb|EAY76236.1| hypothetical protein OsI_04172 [Oryza sativa Indica Group]
          Length = 312

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -3

Query: 139 VPAPELGTFVVQVAKD*IYRVPPPENADLVERYCKRSNIRRRSPC 5
           +PAP+ GT+VVQ+ KD ++RVPPPENA L + Y +R+  R R  C
Sbjct: 64  LPAPQPGTYVVQMPKDKVFRVPPPENARLFQHYTRRARRRARCSC 108


>ref|NP_001147210.1| NHL25 [Zea mays] gi|195608538|gb|ACG26099.1| NHL25 [Zea mays]
          Length = 304

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
 Frame = -3

Query: 142 PVPAPE-----LGTFVVQVAKD*IYRVPPPENADLVERYCKRSNIRRRSPC 5
           PVP P       GT+VVQV KD ++RVPPPENA L + Y +R+  RRR  C
Sbjct: 56  PVPPPPPQQQPAGTYVVQVPKDKVFRVPPPENARLFDHYTRRARRRRRGSC 106


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