BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00052083
         (398 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006474640.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24
ref|XP_006453289.1| hypothetical protein CICLE_v10010788mg, part...   115   6e-24
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
gb|EOY31979.1| Pentatricopeptide repeat superfamily protein isof...   113   2e-23
gb|EOY31976.1| Pentatricopeptide repeat superfamily protein isof...   113   2e-23
gb|EMJ15830.1| hypothetical protein PRUPE_ppa002950mg [Prunus pe...   109   4e-22
ref|XP_004297893.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_004487967.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_002532091.1| pentatricopeptide repeat-containing protein,...   103   2e-20
gb|EXC36735.1| hypothetical protein L484_000436 [Morus notabilis]     103   3e-20
ref|XP_003518395.2| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19
ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_002318172.1| pentatricopeptide repeat-containing family p...    95   1e-17
ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]    94   2e-17
ref|XP_003594983.1| Pentatricopeptide repeat-containing protein ...    94   2e-17
ref|XP_006307028.1| hypothetical protein CARUB_v10008614mg [Caps...    92   9e-17
gb|EOY31977.1| Pentatricopeptide repeat superfamily protein isof...    91   1e-16
ref|NP_180987.2| pentatricopeptide repeat-containing protein [Ar...    91   1e-16

>ref|XP_006474640.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Citrus sinensis]
          Length = 580

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/132 (41%), Positives = 84/132 (63%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           LSLLK+C + +  +QIH  ML   ++KPN                 LF Q  RPN+++FN
Sbjct: 31  LSLLKKCPSTKTVQQIHTQMLINFIQKPNFLLIRIIDLKDFNYASLLFHQISRPNEYAFN 90

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           ++IR L T + ++  +L+ Y +M R GL+PD++T+PFV ++ ANL +L HG+S H+S+FK
Sbjct: 91  VMIRGLTTAWQKYSHSLKLYYQMKRLGLKPDNFTYPFVFISCANLLALNHGVSVHSSVFK 150

Query: 37  LALHDVDHVQHS 2
           + L + DHV HS
Sbjct: 151 IGLDEDDHVSHS 162


>ref|XP_006453289.1| hypothetical protein CICLE_v10010788mg, partial [Citrus clementina]
           gi|557556515|gb|ESR66529.1| hypothetical protein
           CICLE_v10010788mg, partial [Citrus clementina]
          Length = 572

 Score =  115 bits (288), Expect = 6e-24
 Identities = 55/132 (41%), Positives = 84/132 (63%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           LSLLK+C + +  +QIH  ML   ++KPN                 LF Q  RPN+++FN
Sbjct: 28  LSLLKKCPSTKTVQQIHTQMLINFIQKPNFLLIRIIDLKDFNYASLLFHQISRPNEYAFN 87

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           ++IR L T + ++  +L+ Y +M R GL+PD++T+PFV ++ ANL +L HG+S H+S+FK
Sbjct: 88  VMIRGLTTAWQKYSHSLKLYYQMKRLGLKPDNFTYPFVFISCANLLALNHGVSVHSSVFK 147

Query: 37  LALHDVDHVQHS 2
           + L + DHV HS
Sbjct: 148 IGLDEDDHVSHS 159


>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score =  114 bits (284), Expect = 2e-23
 Identities = 57/132 (43%), Positives = 80/132 (60%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           LSLLKQCT+ +  +QIH  M+  A+ KPN                 LFSQ P PN+++FN
Sbjct: 35  LSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDLKDFNNASLLFSQIPYPNEYAFN 94

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           ++IR L T + +F L +EFY +M   G+RP+++T+PFV +A ANL  L HG  AH+ + K
Sbjct: 95  IMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLK 154

Query: 37  LALHDVDHVQHS 2
             L    HV+HS
Sbjct: 155 SGLCADGHVRHS 166


>gb|EOY31979.1| Pentatricopeptide repeat superfamily protein isoform 4 [Theobroma
           cacao] gi|508784726|gb|EOY31982.1| Pentatricopeptide
           repeat superfamily protein isoform 4 [Theobroma cacao]
          Length = 619

 Score =  113 bits (283), Expect = 2e-23
 Identities = 55/132 (41%), Positives = 81/132 (61%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           LS LK+CT+++  +QIHA ML  +++KPN                 LFSQ P+PND++FN
Sbjct: 36  LSFLKKCTSIKLLQQIHAQMLINSIQKPNFLLSKIIDLNNFAYASLLFSQIPQPNDYAFN 95

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           ++IR L T +  +   L FY +M   GL+P+ +T+PF+ +A ANL  L HG +AH+S+F+
Sbjct: 96  VMIRGLTTTWQHYSTTLHFYYQMKFLGLKPNKFTYPFLFIACANLLELSHGQAAHSSVFR 155

Query: 37  LALHDVDHVQHS 2
           L L    H  HS
Sbjct: 156 LGLDVDSHTTHS 167


>gb|EOY31976.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 656

 Score =  113 bits (283), Expect = 2e-23
 Identities = 55/132 (41%), Positives = 81/132 (61%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           LS LK+CT+++  +QIHA ML  +++KPN                 LFSQ P+PND++FN
Sbjct: 73  LSFLKKCTSIKLLQQIHAQMLINSIQKPNFLLSKIIDLNNFAYASLLFSQIPQPNDYAFN 132

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           ++IR L T +  +   L FY +M   GL+P+ +T+PF+ +A ANL  L HG +AH+S+F+
Sbjct: 133 VMIRGLTTTWQHYSTTLHFYYQMKFLGLKPNKFTYPFLFIACANLLELSHGQAAHSSVFR 192

Query: 37  LALHDVDHVQHS 2
           L L    H  HS
Sbjct: 193 LGLDVDSHTTHS 204


>gb|EMJ15830.1| hypothetical protein PRUPE_ppa002950mg [Prunus persica]
          Length = 619

 Score =  109 bits (272), Expect = 4e-22
 Identities = 56/132 (42%), Positives = 76/132 (57%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           L LLK C + +  KQIH  ML  ++ KPN                 LFS  P PND++FN
Sbjct: 40  LYLLKHCVSTKELKQIHTQMLINSIHKPNFLLPKIVDLKDFSYASMLFSHIPEPNDYAFN 99

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           ++IR L T + ++ L LEFY +M    L P+++T+PFV +A ANL  L HG +AH+S+FK
Sbjct: 100 IMIRGLTTTWHKYQLTLEFYYQMKSLCLMPNNFTYPFVFIACANLVELNHGRAAHSSVFK 159

Query: 37  LALHDVDHVQHS 2
             L    HV HS
Sbjct: 160 TGLDKDGHVTHS 171


>ref|XP_004297893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Fragaria vesca subsp. vesca]
          Length = 609

 Score =  107 bits (268), Expect = 1e-21
 Identities = 53/132 (40%), Positives = 75/132 (56%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           L LLKQC +++  KQIH  ML  ++ KPN                 LFSQ P PN ++FN
Sbjct: 30  LHLLKQCLSIKELKQIHTQMLINSIHKPNFLLPKLIDFQDFPYASTLFSQIPEPNSYAFN 89

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           +++R L T + ++PL+L  Y RM   GL PD++TFPF+ +A  NL  + HG + H+S+ K
Sbjct: 90  VMLRGLTTTWHKYPLSLHLYYRMKSLGLSPDNFTFPFLFIACWNLSEIRHGRAGHSSVVK 149

Query: 37  LALHDVDHVQHS 2
                  HV HS
Sbjct: 150 TGFGSDGHVCHS 161


>ref|XP_004487967.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cicer arietinum]
          Length = 609

 Score =  104 bits (259), Expect = 1e-20
 Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQ-NPRPNDFSF 221
           LSL+KQC++ +  +QIH  M+  ++  PN                 +FS   P PN+FSF
Sbjct: 25  LSLVKQCSSTKTLQQIHTQMIINSIHTPNHLLSQSITLKDFNYSSLIFSHITPHPNNFSF 84

Query: 220 NLVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIF 41
           N+++RA  T +  +PL L  Y +M    L PD++TFPFV LA AN++++  G SAH+S+F
Sbjct: 85  NIMLRATTTTWHNYPLTLHLYHQMKSLNLTPDNFTFPFVFLACANMEAVRQGRSAHSSVF 144

Query: 40  KLALHDVDHVQHS 2
           KL L    H  HS
Sbjct: 145 KLGLDCDLHTVHS 157


>ref|XP_002532091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528238|gb|EEF30293.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 446

 Score =  103 bits (258), Expect = 2e-20
 Identities = 49/132 (37%), Positives = 80/132 (60%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           L LLKQC + +  +QIHA M+  ++ KPN                 LF+Q P PND++FN
Sbjct: 36  LKLLKQCRSKKPMQQIHAQMIINSLSKPNFLLPRIIDLKDFAYASLLFTQMPNPNDYAFN 95

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           ++IR L T +  + LA++ Y +M   GL+P+++TFPF+ ++ ANL +L+ G  AH+ + K
Sbjct: 96  VMIRGLTTTWRNYSLAIQLYYQMKSLGLKPNNFTFPFLFISCANLVALHCGQIAHSLVLK 155

Query: 37  LALHDVDHVQHS 2
           +  ++  H+ HS
Sbjct: 156 MGFNNDSHINHS 167


>gb|EXC36735.1| hypothetical protein L484_000436 [Morus notabilis]
          Length = 311

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/132 (38%), Positives = 80/132 (60%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           LS LK+C +++  +QI   ML  ++ KPN                 LF+  P PND++FN
Sbjct: 44  LSHLKKCISIKQLQQIQTQMLINSIHKPNFLLSKAIDLKSFAYASALFAHIPEPNDYAFN 103

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           ++IR L T + ++ LALEF+ +M    L+ + +T+PFV +A ANL +L HG +AH+S+FK
Sbjct: 104 VMIRGLTTTWQKYGLALEFHCQMKGLSLKTNKFTYPFVFIACANLSTLNHGRTAHSSVFK 163

Query: 37  LALHDVDHVQHS 2
           + L   +HV +S
Sbjct: 164 IGLDGDEHVSNS 175


>ref|XP_003518395.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like isoform X1 [Glycine max]
          Length = 615

 Score =  101 bits (251), Expect = 1e-19
 Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
 Frame = -2

Query: 391 LLKQCTTLRCFKQIHAHMLT-LAVRKPNDXXXXXXXXXXXXXXXXLFSQN--PRPNDFSF 221
           L KQC++ +  +Q+H  M+   ++  PN+                L   +  P PND++F
Sbjct: 31  LAKQCSSTKTLQQVHTQMVVNSSIHTPNNHLLSKAIHLKNFPYSSLLFSHIAPHPNDYAF 90

Query: 220 NLVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIF 41
           N++IRAL T +  +PLAL  + RM+   L PD++TFPF  L+ ANL SL H  +AH+ +F
Sbjct: 91  NIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLF 150

Query: 40  KLALHDVDHVQHS 2
           KLALH   H  HS
Sbjct: 151 KLALHSDPHTAHS 163


>ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/131 (38%), Positives = 77/131 (58%)
 Frame = -2

Query: 394 SLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFNL 215
           SLL+QC +++  KQIHA +LT ++ KPN                  FS    P ++SFN+
Sbjct: 37  SLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNV 96

Query: 214 VIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFKL 35
           +IR L T +++  LALEFY RM   GL+P++ T+PF+ +A +NL ++ +G   H S+ + 
Sbjct: 97  MIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156

Query: 34  ALHDVDHVQHS 2
            L +  HV HS
Sbjct: 157 GLDEDGHVSHS 167


>ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/131 (38%), Positives = 77/131 (58%)
 Frame = -2

Query: 394 SLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFNL 215
           SLL+QC +++  KQIHA +LT ++ KPN                  FS    P ++SFN+
Sbjct: 37  SLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNV 96

Query: 214 VIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFKL 35
           +IR L T +++  LALEFY RM   GL+P++ T+PF+ +A +NL ++ +G   H S+ + 
Sbjct: 97  MIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156

Query: 34  ALHDVDHVQHS 2
            L +  HV HS
Sbjct: 157 GLDEDGHVSHS 167


>ref|XP_002318172.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222858845|gb|EEE96392.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 617

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/132 (33%), Positives = 74/132 (56%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           LSL+KQC +    KQIHA ML  ++ KPN                 +F+Q  +PN ++FN
Sbjct: 37  LSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDLKDLAYASLVFNQLTKPNIYAFN 96

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
           +++R L T + ++   +E Y ++   GL+ +++T+PF+ +A  N++ L HG   H  +FK
Sbjct: 97  VMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFK 156

Query: 37  LALHDVDHVQHS 2
             L   ++V HS
Sbjct: 157 AGLDGDEYVNHS 168


>ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like isoform X1 [Glycine max]
          Length = 608

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
 Frame = -2

Query: 391 LLKQCTTLRCFKQIHAHMLTLA-VRKPNDXXXXXXXXXXXXXXXXLFSQN--PRPNDFSF 221
           L KQC++ +  +Q+HA M+  + +  PN+                L   +  P PND++F
Sbjct: 24  LAKQCSSSKTLQQVHAQMVVKSSIHSPNNHLLSKAIHLKNFTYASLLFSHIAPHPNDYAF 83

Query: 220 NLVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIF 41
           N++IRAL T +  +PLAL  + RM+   L P+++TFPF  L+ ANL  L    +AH+ +F
Sbjct: 84  NIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVF 143

Query: 40  KLALHDVDHVQHS 2
           KLALH   H  HS
Sbjct: 144 KLALHSDPHTTHS 156


>gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQ-NPRPNDFSF 221
           LSLLKQC + +  +QIH      ++ KPN                 +FS   P PND++F
Sbjct: 25  LSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISLKDFTYSTLIFSHITPHPNDYAF 84

Query: 220 NLVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIF 41
           N+++RA  T +  +PL L  Y +M    + P+++TFPFV LA ANL+ +     AH  +F
Sbjct: 85  NIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVF 144

Query: 40  KLALHDVDHVQHS 2
           KL L +  H  +S
Sbjct: 145 KLGLDNDHHTVNS 157


>ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484031|gb|AES65234.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 702

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQ-NPRPNDFSF 221
           LSLLKQC + +  +QIH      ++ KPN                 +FS   P PND++F
Sbjct: 25  LSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISLKDFTYSTLIFSHITPHPNDYAF 84

Query: 220 NLVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIF 41
           N+++RA  T +  +PL L  Y +M    + P+++TFPFV LA ANL+ +     AH  +F
Sbjct: 85  NIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVF 144

Query: 40  KLALHDVDHVQHS 2
           KL L +  H  +S
Sbjct: 145 KLGLDNDHHTVNS 157


>ref|XP_006307028.1| hypothetical protein CARUB_v10008614mg [Capsella rubella]
           gi|482575739|gb|EOA39926.1| hypothetical protein
           CARUB_v10008614mg [Capsella rubella]
          Length = 611

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 50/132 (37%), Positives = 70/132 (53%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           L LLK+C ++   ++I A M+  +V KPN                 LFS    PN +SFN
Sbjct: 32  LFLLKKCISVNQLREIQAQMMFHSVDKPNFLIPRAVELGDFNYATFLFSVTEEPNHYSFN 91

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
            +IR L   +     AL  Y RM  SGL+PD++T+ F ++A  NL+ L  G S H+S+FK
Sbjct: 92  YMIRGLTNTWHHHEAALSLYRRMKFSGLKPDNFTYNFAVIACGNLEELGVGRSVHSSLFK 151

Query: 37  LALHDVDHVQHS 2
           + L   DH  HS
Sbjct: 152 VGLERDDHTNHS 163


>gb|EOY31977.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
           cacao] gi|508784722|gb|EOY31978.1| Pentatricopeptide
           repeat superfamily protein isoform 2 [Theobroma cacao]
           gi|508784724|gb|EOY31980.1| Pentatricopeptide repeat
           superfamily protein isoform 2 [Theobroma cacao]
           gi|508784725|gb|EOY31981.1| Pentatricopeptide repeat
           superfamily protein isoform 2 [Theobroma cacao]
          Length = 565

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 45/113 (39%), Positives = 66/113 (58%)
 Frame = -2

Query: 340 MLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFNLVIRALVTLYSRFPLALEF 161
           ML  +++KPN                 LFSQ P+PND++FN++IR L T +  +   L F
Sbjct: 1   MLINSIQKPNFLLSKIIDLNNFAYASLLFSQIPQPNDYAFNVMIRGLTTTWQHYSTTLHF 60

Query: 160 YLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFKLALHDVDHVQHS 2
           Y +M   GL+P+ +T+PF+ +A ANL  L HG +AH+S+F+L L    H  HS
Sbjct: 61  YYQMKFLGLKPNKFTYPFLFIACANLLELSHGQAAHSSVFRLGLDVDSHTTHS 113


>ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546770|sp|O64705.2|PP184_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g34400 gi|330253874|gb|AEC08968.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 51/132 (38%), Positives = 70/132 (53%)
 Frame = -2

Query: 397 LSLLKQCTTLRCFKQIHAHMLTLAVRKPNDXXXXXXXXXXXXXXXXLFSQNPRPNDFSFN 218
           L LLK+C ++   +QI A ML  +V KPN                 LFS    PN +SFN
Sbjct: 41  LFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFN 100

Query: 217 LVIRALVTLYSRFPLALEFYLRMLRSGLRPDHYTFPFVLLAAANLQSLYHGLSAHASIFK 38
            +IR L   ++    AL  Y RM  SGL+PD +T+ FV +A A L+ +  G S H+S+FK
Sbjct: 101 YMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFK 160

Query: 37  LALHDVDHVQHS 2
           + L    H+ HS
Sbjct: 161 VGLERDVHINHS 172