BLASTX nr result

ID: Zingiber24_contig00052082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00052082
         (284 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY99186.1| hypothetical protein OsI_21143 [Oryza sativa Indi...    58   1e-06
ref|NP_001056435.1| Os05g0582000 [Oryza sativa Japonica Group] g...    58   1e-06
ref|XP_004961103.1| PREDICTED: uncharacterized protein LOC101762...    56   4e-06
ref|XP_002441578.1| hypothetical protein SORBIDRAFT_09g029710 [S...    55   7e-06

>gb|EAY99186.1| hypothetical protein OsI_21143 [Oryza sativa Indica Group]
          Length = 297

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
 Frame = +2

Query: 2   RAIRLVLAASSSVQRALFPDVTFPRKPVHRVTVSMDAGGGL--NDTVVVIRAGVAENEFE 175
           +A R++  A+  V+ ALFPD +FPRK V RVTV M AG  L  +D   VI AGVA  E+ 
Sbjct: 85  KAERILHYANRGVEAALFPDASFPRKQVTRVTVRM-AGHNLTDDDDATVIAAGVAPGEYV 143

Query: 176 VLVNPTVM--XXXXXXXXXXXXXXXXXXXXWLWDGQG 280
           + ++P +M                      WLWDG+G
Sbjct: 144 ISLSPRLMHPASDKAADAVANAVRRAVARMWLWDGRG 180


>ref|NP_001056435.1| Os05g0582000 [Oryza sativa Japonica Group]
           gi|48475131|gb|AAT44200.1| unknown protein [Oryza sativa
           Japonica Group] gi|113579986|dbj|BAF18349.1|
           Os05g0582000 [Oryza sativa Japonica Group]
          Length = 297

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
 Frame = +2

Query: 2   RAIRLVLAASSSVQRALFPDVTFPRKPVHRVTVSMDAGGGL--NDTVVVIRAGVAENEFE 175
           +A R++  A+  V+ ALFPD +FPRK V RVTV M AG  L  +D   VI AGVA  E+ 
Sbjct: 85  KAERILHYANRGVEAALFPDASFPRKQVTRVTVRM-AGHNLTDDDDATVIAAGVAPGEYV 143

Query: 176 VLVNPTVM--XXXXXXXXXXXXXXXXXXXXWLWDGQG 280
           + ++P +M                      WLWDG+G
Sbjct: 144 ISLSPRLMHPASDKAADAVANAVRRAVARMWLWDGRG 180


>ref|XP_004961103.1| PREDICTED: uncharacterized protein LOC101762806 [Setaria italica]
          Length = 314

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
 Frame = +2

Query: 2   RAIRLVLAASSSVQRALFPDVTFPRKPVHRVTVSMDAGGGLNDTV-VVIRAGVAENEFEV 178
           RA R++L AS  V+RALFPD +FPRK V RVTV M    G N T    + A  A  E+ V
Sbjct: 100 RAERILLHASRGVERALFPDASFPRKEVRRVTVKM---AGYNLTAGATVDAAAAPGEYVV 156

Query: 179 LVNPTVM----XXXXXXXXXXXXXXXXXXXXWLWDGQG 280
            ++P ++                        WLWDG+G
Sbjct: 157 SLSPALVSGTGTGADAADAVAAAVRRAVARMWLWDGRG 194


>ref|XP_002441578.1| hypothetical protein SORBIDRAFT_09g029710 [Sorghum bicolor]
           gi|241946863|gb|EES20008.1| hypothetical protein
           SORBIDRAFT_09g029710 [Sorghum bicolor]
          Length = 315

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
 Frame = +2

Query: 2   RAIRLVLAASSSVQRALFPDVTFPRKPVHRVTVSMDAGGGLNDTVVVIRAGVAENEFEVL 181
           RA R +L AS  V+RALFPD +FPR+PV RVTV M    G N T        A  E+ V 
Sbjct: 99  RAERALLHASRGVERALFPDPSFPRRPVRRVTVRM---AGHNLTAGATVHAAAPGEYVVT 155

Query: 182 VNPTVM---XXXXXXXXXXXXXXXXXXXXWLWDGQG 280
           ++P+++                       WLWDG+G
Sbjct: 156 LSPSLVASTSAGTAADAVAAALRRAVARMWLWDGRG 191


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