BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00052033
         (257 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513521.1| transcription initiation factor iib, putativ...   142   5e-32
ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   142   6e-32
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   142   6e-32
ref|XP_004493474.1| PREDICTED: transcription initiation factor I...   141   8e-32
gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao]           141   1e-31
ref|XP_004516731.1| PREDICTED: transcription initiation factor I...   140   1e-31
ref|XP_006605212.1| PREDICTED: transcription initiation factor I...   140   2e-31
ref|XP_003625123.1| Transcription initiation factor IIB [Medicag...   140   2e-31
ref|XP_002322722.1| Transcription initiation factor IIB-1 family...   139   3e-31
gb|EOY09191.1| Cyclin-like family protein isoform 2, partial [Th...   139   4e-31
gb|EOY09190.1| Cyclin-like family protein isoform 1 [Theobroma c...   139   4e-31
ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group] g...   139   4e-31
gb|EMS56891.1| Transcription initiation factor IIB [Triticum ura...   139   5e-31
ref|NP_001238343.1| transcription initiation factor IIB [Glycine...   139   5e-31
ref|XP_003578512.1| PREDICTED: transcription initiation factor I...   139   5e-31
ref|XP_003519077.1| PREDICTED: transcription initiation factor I...   139   5e-31
ref|XP_006407583.1| hypothetical protein EUTSA_v100213350mg, par...   138   7e-31
ref|XP_004957467.1| PREDICTED: transcription initiation factor I...   138   7e-31
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   138   7e-31
ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [S...   138   7e-31

>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223547429|gb|EEF48924.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  142 bits (358), Expect = 5e-32
 Identities = 64/70 (91%), Positives = 67/70 (95%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           MAD +CPDCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANESADNDPVRVG
Sbjct: 1   MADTYCPDCKRPTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESADNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLL DG
Sbjct: 61  GPSNPLLADG 70


>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  142 bits (357), Expect = 6e-32
 Identities = 64/70 (91%), Positives = 68/70 (97%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           MADAFC DCK++TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLLTDG
Sbjct: 61  GPSNPLLTDG 70


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  142 bits (357), Expect = 6e-32
 Identities = 64/70 (91%), Positives = 68/70 (97%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           MADAFC DCK++TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLLTDG
Sbjct: 61  GPSNPLLTDG 70


>ref|XP_004493474.1| PREDICTED: transcription initiation factor IIB-like [Cicer
           arietinum]
          Length = 312

 Score =  141 bits (356), Expect = 8e-32
 Identities = 64/70 (91%), Positives = 67/70 (95%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+DAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLLTDG
Sbjct: 61  GPSNPLLTDG 70


>gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao]
          Length = 312

 Score =  141 bits (355), Expect = 1e-31
 Identities = 64/70 (91%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           MAD+FCPDCKR TEVVFDHSAGD VCSECGLVLEAH+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MADSFCPDCKRPTEVVFDHSAGDIVCSECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLL DG
Sbjct: 61  GPSNPLLADG 70


>ref|XP_004516731.1| PREDICTED: transcription initiation factor IIB-like [Cicer
           arietinum]
          Length = 312

 Score =  140 bits (354), Expect = 1e-31
 Identities = 64/70 (91%), Positives = 67/70 (95%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+DAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDAFCSDCKRETEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESNDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLLTDG
Sbjct: 61  GPSNPLLTDG 70


>ref|XP_006605212.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 300

 Score =  140 bits (353), Expect = 2e-31
 Identities = 63/70 (90%), Positives = 67/70 (95%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+DAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GP+NPLLTDG
Sbjct: 61  GPTNPLLTDG 70


>ref|XP_003625123.1| Transcription initiation factor IIB [Medicago truncatula]
           gi|355500138|gb|AES81341.1| Transcription initiation
           factor IIB [Medicago truncatula]
          Length = 313

 Score =  140 bits (352), Expect = 2e-31
 Identities = 63/70 (90%), Positives = 67/70 (95%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+DAFC DCKR+TEVVFDHSAGD VCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDAFCSDCKRATEVVFDHSAGDAVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLLTDG
Sbjct: 61  GPSNPLLTDG 70


>ref|XP_002322722.1| Transcription initiation factor IIB-1 family protein [Populus
           trichocarpa] gi|222867352|gb|EEF04483.1| Transcription
           initiation factor IIB-1 family protein [Populus
           trichocarpa]
          Length = 312

 Score =  139 bits (351), Expect = 3e-31
 Identities = 63/70 (90%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M DAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MGDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GP+NPLLTDG
Sbjct: 61  GPTNPLLTDG 70


>gb|EOY09191.1| Cyclin-like family protein isoform 2, partial [Theobroma cacao]
          Length = 248

 Score =  139 bits (350), Expect = 4e-31
 Identities = 63/70 (90%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           MADAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MADAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GP+NPLL DG
Sbjct: 61  GPTNPLLADG 70


>gb|EOY09190.1| Cyclin-like family protein isoform 1 [Theobroma cacao]
          Length = 312

 Score =  139 bits (350), Expect = 4e-31
 Identities = 63/70 (90%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           MADAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MADAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GP+NPLL DG
Sbjct: 61  GPTNPLLADG 70


>ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group]
           gi|21362998|sp|Q8W0W3.1|TF2B_ORYSJ RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|18481632|gb|AAL73491.1|AF464908_1 general
           transcription factor TFIIB [Oryza sativa]
           gi|50725809|dbj|BAD33339.1| Transcription initiation
           factor IIB [Oryza sativa Japonica Group]
           gi|50726577|dbj|BAD34211.1| Transcription initiation
           factor IIB [Oryza sativa Japonica Group]
           gi|113632008|dbj|BAF25689.1| Os09g0534800 [Oryza sativa
           Japonica Group] gi|125564497|gb|EAZ09877.1| hypothetical
           protein OsI_32170 [Oryza sativa Indica Group]
           gi|125606444|gb|EAZ45480.1| hypothetical protein
           OsJ_30135 [Oryza sativa Japonica Group]
           gi|347737122|gb|AEP20532.1| transcription factor [Oryza
           sativa Japonica Group]
          Length = 312

 Score =  139 bits (350), Expect = 4e-31
 Identities = 60/70 (85%), Positives = 68/70 (97%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+D+FCPDCK+ TEV FDHSAGDTVC+ECGLVLEAH++DETSEWRTFANES+DNDPVRVG
Sbjct: 1   MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GP+NPLLTDG
Sbjct: 61  GPTNPLLTDG 70


>gb|EMS56891.1| Transcription initiation factor IIB [Triticum urartu]
          Length = 358

 Score =  139 bits (349), Expect = 5e-31
 Identities = 61/70 (87%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+D FCPDCK+ TEV FDHSAGDTVC+ECGLVLEAH++DETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDTFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLLTDG
Sbjct: 61  GPSNPLLTDG 70


>ref|NP_001238343.1| transcription initiation factor IIB [Glycine max]
           gi|1351222|sp|P48513.1|TF2B_SOYBN RecName:
           Full=Transcription initiation factor IIB; AltName:
           Full=General transcription factor TFIIB
           gi|945087|gb|AAB09756.1| transcription factor TFIIB
           [Glycine max]
          Length = 313

 Score =  139 bits (349), Expect = 5e-31
 Identities = 63/70 (90%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+DAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDP RVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLLTDG
Sbjct: 61  GPSNPLLTDG 70


>ref|XP_003578512.1| PREDICTED: transcription initiation factor IIB-like [Brachypodium
           distachyon]
          Length = 312

 Score =  139 bits (349), Expect = 5e-31
 Identities = 61/70 (87%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+D FCPDCK+ TEV FDHSAGDTVC+ECGLVLEAH++DETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDTFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLLTDG
Sbjct: 61  GPSNPLLTDG 70


>ref|XP_003519077.1| PREDICTED: transcription initiation factor IIB-like [Glycine max]
          Length = 314

 Score =  139 bits (349), Expect = 5e-31
 Identities = 63/70 (90%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+DAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDP RVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 32  GPSNPLLTDG 3
           GPSNPLLTDG
Sbjct: 61  GPSNPLLTDG 70


>ref|XP_006407583.1| hypothetical protein EUTSA_v100213350mg, partial [Eutrema
           salsugineum] gi|557108729|gb|ESQ49036.1| hypothetical
           protein EUTSA_v100213350mg, partial [Eutrema
           salsugineum]
          Length = 167

 Score =  138 bits (348), Expect = 7e-31
 Identities = 62/70 (88%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+DAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GP+NPLL DG
Sbjct: 61  GPTNPLLADG 70


>ref|XP_004957467.1| PREDICTED: transcription initiation factor IIB-like [Setaria
           italica]
          Length = 312

 Score =  138 bits (348), Expect = 7e-31
 Identities = 60/70 (85%), Positives = 67/70 (95%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+D+FCPDCK+ TEV FDHSAGDTVC+ECGLVLEAH++DETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GP+NPLLTDG
Sbjct: 61  GPTNPLLTDG 70


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
           sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
           transcription initiation factor IIB-2-like [Cucumis
           sativus]
          Length = 312

 Score =  138 bits (348), Expect = 7e-31
 Identities = 62/70 (88%), Positives = 66/70 (94%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+DAFC DCKR TEVVFDHSAGDTVCSECGLVLE+H+IDETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GP+NPLL DG
Sbjct: 61  GPTNPLLADG 70


>ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [Sorghum bicolor]
           gi|241923949|gb|EER97093.1| hypothetical protein
           SORBIDRAFT_02g031020 [Sorghum bicolor]
          Length = 312

 Score =  138 bits (348), Expect = 7e-31
 Identities = 60/70 (85%), Positives = 67/70 (95%)
 Frame = -1

Query: 212 MADAFCPDCKRSTEVVFDHSAGDTVCSECGLVLEAHAIDETSEWRTFANESADNDPVRVG 33
           M+D+FCPDCK+ TEV FDHSAGDTVC+ECGLVLEAH++DETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60

Query: 32  GPSNPLLTDG 3
           GP+NPLLTDG
Sbjct: 61  GPTNPLLTDG 70