BLASTX nr result
ID: Zingiber24_contig00052027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00052027
(492 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3... 151 1e-34
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2... 151 1e-34
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1... 151 1e-34
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 147 2e-33
emb|CBI36559.3| unnamed protein product [Vitis vinifera] 146 2e-33
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 146 2e-33
ref|XP_004965707.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 145 4e-33
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera] 145 4e-33
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ... 145 7e-33
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 144 1e-32
ref|XP_003563329.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 144 1e-32
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 144 2e-32
emb|CAA06488.1| DNA directed RNA polymerase [Zea mays] gi|413954... 144 2e-32
ref|NP_001104932.1| RNA polymerase2 [Zea mays] gi|4559306|gb|AAD... 144 2e-32
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe... 143 3e-32
gb|AAB01085.2| single-subunit RNA polymerase C [Triticum aestivum] 143 3e-32
ref|NP_001058231.2| Os06g0652000 [Oryza sativa Japonica Group] g... 143 3e-32
dbj|BAC76605.1| RpoT2 [Oryza sativa Japonica Group] gi|37360971|... 143 3e-32
ref|XP_002437374.1| hypothetical protein SORBIDRAFT_10g025820 [S... 143 3e-32
gb|EEE66135.1| hypothetical protein OsJ_22187 [Oryza sativa Japo... 143 3e-32
>gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
Length = 927
Score = 151 bits (381), Expect = 1e-34
Identities = 79/154 (51%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Frame = +2
Query: 32 LEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQ 211
L K +EI +EV+KL+KNE EI+ WGRD QAKLG RL+ELL E+A+VQ
Sbjct: 288 LSKEKEILKKRVNSLIRRRRLVEVQKLVKNE-EIKPWGRDAQAKLGSRLLELLTETAYVQ 346
Query: 212 VGSDRLEDTIPVVQPAFRHMLKHIPNEDGKSV-SRYGVIECDPLVRKGLNNTARHXXXXX 388
D+ D+ P VQPAFRH K I + GK + RYGVIECDPL+ GL+ +A+H
Sbjct: 347 PPIDQSGDSPPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPY 406
Query: 389 XXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
K WKGYD GG+LFLPSY MRTHG+++Q
Sbjct: 407 VPMLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 440
>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
Length = 857
Score = 151 bits (381), Expect = 1e-34
Identities = 79/154 (51%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Frame = +2
Query: 32 LEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQ 211
L K +EI +EV+KL+KNE EI+ WGRD QAKLG RL+ELL E+A+VQ
Sbjct: 166 LSKEKEILKKRVNSLIRRRRLVEVQKLVKNE-EIKPWGRDAQAKLGSRLLELLTETAYVQ 224
Query: 212 VGSDRLEDTIPVVQPAFRHMLKHIPNEDGKSV-SRYGVIECDPLVRKGLNNTARHXXXXX 388
D+ D+ P VQPAFRH K I + GK + RYGVIECDPL+ GL+ +A+H
Sbjct: 225 PPIDQSGDSPPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPY 284
Query: 389 XXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
K WKGYD GG+LFLPSY MRTHG+++Q
Sbjct: 285 VPMLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 318
>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 151 bits (381), Expect = 1e-34
Identities = 79/154 (51%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Frame = +2
Query: 32 LEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQ 211
L K +EI +EV+KL+KNE EI+ WGRD QAKLG RL+ELL E+A+VQ
Sbjct: 288 LSKEKEILKKRVNSLIRRRRLVEVQKLVKNE-EIKPWGRDAQAKLGSRLLELLTETAYVQ 346
Query: 212 VGSDRLEDTIPVVQPAFRHMLKHIPNEDGKSV-SRYGVIECDPLVRKGLNNTARHXXXXX 388
D+ D+ P VQPAFRH K I + GK + RYGVIECDPL+ GL+ +A+H
Sbjct: 347 PPIDQSGDSPPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPY 406
Query: 389 XXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
K WKGYD GG+LFLPSY MRTHG+++Q
Sbjct: 407 VPMLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 440
>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 973
Score = 147 bits (370), Expect = 2e-33
Identities = 81/154 (52%), Positives = 95/154 (61%), Gaps = 1/154 (0%)
Frame = +2
Query: 32 LEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQ 211
L K +EI +EV+KLLK E +++ WGRD QAKLG RLIELL E+A VQ
Sbjct: 283 LSKEKEILRKRVNGLIRRKRLVEVQKLLKKE-DMKPWGRDTQAKLGSRLIELLTETAHVQ 341
Query: 212 VGSDRLEDTIPVVQPAFRHMLKHIPNEDG-KSVSRYGVIECDPLVRKGLNNTARHXXXXX 388
D+L D P V+PAFRH LK G K V YGVIECDPLV GL+ TA+H
Sbjct: 342 PPLDQLADGPPDVRPAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLAGLDKTAKHMLIPY 401
Query: 389 XXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
K WKGYD GGHLFLPSY MRTHG+++Q
Sbjct: 402 VPMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQ 435
>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 146 bits (369), Expect = 2e-33
Identities = 81/164 (49%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Frame = +2
Query: 2 RNIGNDRNAILEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLI 181
+ +G+ + + EK EI IEV+KL+KNE EI WGRD QAKLG RLI
Sbjct: 110 KTVGHSQEGLREK--EILRKRVKSFIRKKKIIEVQKLVKNE-EITPWGRDTQAKLGSRLI 166
Query: 182 ELLLESAFVQVGSDRLEDTIPVVQPAFRHMLKHIPNEDG-KSVSRYGVIECDPLVRKGLN 358
ELL E+A+VQ ++ D P V+PAFRH K + E G K +YGVIECDPLV GL+
Sbjct: 167 ELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLD 226
Query: 359 NTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
TA+H K WKGYD GG+LFLPSY MRTHG+++Q
Sbjct: 227 RTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 270
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 146 bits (369), Expect = 2e-33
Identities = 81/164 (49%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Frame = +2
Query: 2 RNIGNDRNAILEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLI 181
+ +G+ + + EK EI IEV+KL+KNE EI WGRD QAKLG RLI
Sbjct: 281 KTVGHSQEGLREK--EILRKRVKSFIRKKKIIEVQKLVKNE-EITPWGRDTQAKLGSRLI 337
Query: 182 ELLLESAFVQVGSDRLEDTIPVVQPAFRHMLKHIPNEDG-KSVSRYGVIECDPLVRKGLN 358
ELL E+A+VQ ++ D P V+PAFRH K + E G K +YGVIECDPLV GL+
Sbjct: 338 ELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLD 397
Query: 359 NTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
TA+H K WKGYD GG+LFLPSY MRTHG+++Q
Sbjct: 398 RTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 441
>ref|XP_004965707.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Setaria italica]
Length = 966
Score = 145 bits (367), Expect = 4e-33
Identities = 70/131 (53%), Positives = 90/131 (68%)
Frame = +2
Query: 98 EVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQVGSDRLEDTIPVVQPAFRHMLK 277
E +KL++ ELE+E WG + Q KLG RLIELLL+SAFVQ +D+ D+ P ++PAFRH+L+
Sbjct: 298 EAQKLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQTPDSSPDIRPAFRHVLR 357
Query: 278 HIPNEDGKSVSRYGVIECDPLVRKGLNNTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPS 457
E+G+ ++ VIECD LV +G +TARH K WKGYD GGHLFLPS
Sbjct: 358 QPIIENGRLKKKHWVIECDHLVHEGFESTARHVDIPYLPMLVPPKKWKGYDKGGHLFLPS 417
Query: 458 YAMRTHGAKEQ 490
Y MRTHG K+Q
Sbjct: 418 YIMRTHGVKDQ 428
>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
Length = 1312
Score = 145 bits (367), Expect = 4e-33
Identities = 81/164 (49%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Frame = +2
Query: 2 RNIGNDRNAILEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLI 181
+ +G+ + + EK EI IEV+KL+KNE EI WGRD QAKLG RLI
Sbjct: 606 KTVGHSQEGLREK--EILRKRVKSFIRKKKIIEVQKLVKNE-EITPWGRDTQAKLGSRLI 662
Query: 182 ELLLESAFVQVGSDRLEDTIPVVQPAFRHMLKHIPNEDG-KSVSRYGVIECDPLVRKGLN 358
ELL E+A+VQ + D P V+PAFRH K + E G K +YGVIECDPLV GL+
Sbjct: 663 ELLTETAYVQTPVXQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLD 722
Query: 359 NTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
TA+H K WKGYD GG+LFLPSY MRTHG+++Q
Sbjct: 723 RTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQ 766
>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
[Ricinus communis] gi|223532193|gb|EEF33998.1|
DNA-directed RNA polymerase 3B, chloroplast precursor,
putative [Ricinus communis]
Length = 1000
Score = 145 bits (365), Expect = 7e-33
Identities = 78/154 (50%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Frame = +2
Query: 32 LEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQ 211
L K +EI IEV+KL+KNE E++ WGRD QAKLG RLIELL E+AFVQ
Sbjct: 297 LGKEKEILRKRVNSLIRRKKLIEVQKLVKNE-EMKPWGRDTQAKLGSRLIELLTETAFVQ 355
Query: 212 VGSDRLEDTIPVVQPAFRHMLKHIPNEDG-KSVSRYGVIECDPLVRKGLNNTARHXXXXX 388
++ D P V+PAFRH + + N G K V +YGVIEC+PLV KGL+ +A+H
Sbjct: 356 PPVNQSADVPPDVRPAFRHRFRIVKNNPGQKIVKKYGVIECNPLVLKGLDGSAKHMLIPY 415
Query: 389 XXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
K WKGY+ GGH FLPSY MRTHG+++Q
Sbjct: 416 FPMLVPPKKWKGYNKGGHFFLPSYIMRTHGSRKQ 449
>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic;
AltName: Full=NsRpoT-C; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3;
Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
RecName: Full=DNA-directed RNA polymerase 3A,
chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
Full=T7 bacteriophage-type single subunit RNA polymerase
3A; Flags: Precursor gi|21425641|emb|CAC82576.3|
phage-type RNA polymerase [Nicotiana sylvestris]
gi|21425679|emb|CAC95027.2| plastid RNA polymerase
[Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 977
Score = 144 bits (363), Expect = 1e-32
Identities = 72/133 (54%), Positives = 93/133 (69%), Gaps = 1/133 (0%)
Frame = +2
Query: 95 IEVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQVGSDRLEDTIPVVQPAFRHML 274
+EV+KL+K+E E ESWGRD QAKLGCRL+ELL E+A+VQ D+ DT P ++PAFRH+
Sbjct: 309 VEVRKLMKSE-EPESWGRDTQAKLGCRLLELLTETAYVQPPVDQSADTPPDIRPAFRHVF 367
Query: 275 KHIPNEDGKS-VSRYGVIECDPLVRKGLNNTARHXXXXXXXXXXXXKSWKGYDLGGHLFL 451
+ + GKS V +YGVIECDPLV G++ T + K W+GYD GG+LFL
Sbjct: 368 RIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFL 427
Query: 452 PSYAMRTHGAKEQ 490
PSY MRTHG++ Q
Sbjct: 428 PSYLMRTHGSRRQ 440
>ref|XP_003563329.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Brachypodium distachyon]
Length = 943
Score = 144 bits (363), Expect = 1e-32
Identities = 68/131 (51%), Positives = 90/131 (68%)
Frame = +2
Query: 98 EVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQVGSDRLEDTIPVVQPAFRHMLK 277
E +KL++ E+E+E WG + Q KLG RLIELLL+SAFVQ +D++ D+ P +PAF+H+L+
Sbjct: 275 EAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQIPDSSPDFRPAFKHVLR 334
Query: 278 HIPNEDGKSVSRYGVIECDPLVRKGLNNTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPS 457
E+G+ ++ VIECDPLV +G +TARH WKGYD GGHLFLPS
Sbjct: 335 KPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLPS 394
Query: 458 YAMRTHGAKEQ 490
Y MRTHG K+Q
Sbjct: 395 YVMRTHGVKDQ 405
>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic;
AltName: Full=NictaRpoT3-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3B;
Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 977
Score = 144 bits (362), Expect = 2e-32
Identities = 72/133 (54%), Positives = 93/133 (69%), Gaps = 1/133 (0%)
Frame = +2
Query: 95 IEVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQVGSDRLEDTIPVVQPAFRHML 274
+EV+KL+K+E E ESWGRD QAKLGCRL+ELL E+A+VQ D+ DT P ++PAFRH+
Sbjct: 308 VEVRKLMKSE-EPESWGRDTQAKLGCRLLELLTETAYVQRPVDQSADTPPDIRPAFRHVF 366
Query: 275 KHIPNEDGKS-VSRYGVIECDPLVRKGLNNTARHXXXXXXXXXXXXKSWKGYDLGGHLFL 451
K + GK+ V +YGVIECDPLV G++ T + K W+GYD GG+LFL
Sbjct: 367 KIATRDPGKNIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFL 426
Query: 452 PSYAMRTHGAKEQ 490
PSY MRTHG++ Q
Sbjct: 427 PSYLMRTHGSRRQ 439
>emb|CAA06488.1| DNA directed RNA polymerase [Zea mays] gi|413954906|gb|AFW87555.1|
DNA-directed RNA polymerase isoform 1 [Zea mays]
gi|413954907|gb|AFW87556.1| DNA-directed RNA polymerase
isoform 2 [Zea mays]
Length = 952
Score = 144 bits (362), Expect = 2e-32
Identities = 72/163 (44%), Positives = 98/163 (60%)
Frame = +2
Query: 2 RNIGNDRNAILEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLI 181
+ I + + LEK + E ++L++ ELE+E WG + Q KLG RLI
Sbjct: 252 KKIQGENDPALEKEQAKCRKRVKSLVKRRKMSEAQRLVQQELELEEWGTEAQVKLGSRLI 311
Query: 182 ELLLESAFVQVGSDRLEDTIPVVQPAFRHMLKHIPNEDGKSVSRYGVIECDPLVRKGLNN 361
ELLL+SAFVQ +D+ D+ P ++PAF+H+L+ E+G+ ++ VIECD LV +G +
Sbjct: 312 ELLLDSAFVQPPADQTPDSSPDIRPAFKHVLRQPIIENGRLKKKHWVIECDHLVHEGFES 371
Query: 362 TARHXXXXXXXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
TARH K WKGYD GGHLFLPSY MRTHG K+Q
Sbjct: 372 TARHVDIPYLPMLVPPKKWKGYDKGGHLFLPSYIMRTHGVKDQ 414
>ref|NP_001104932.1| RNA polymerase2 [Zea mays] gi|4559306|gb|AAD22977.1|AF127022_1
T7-like RNA polymerase [Zea mays]
Length = 952
Score = 144 bits (362), Expect = 2e-32
Identities = 72/163 (44%), Positives = 98/163 (60%)
Frame = +2
Query: 2 RNIGNDRNAILEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLI 181
+ I + + LEK + E ++L++ ELE+E WG + Q KLG RLI
Sbjct: 252 KKIQGENDPALEKEQAKCRKRVKSLVKRRKMSEAQRLVQQELELEEWGTEAQVKLGSRLI 311
Query: 182 ELLLESAFVQVGSDRLEDTIPVVQPAFRHMLKHIPNEDGKSVSRYGVIECDPLVRKGLNN 361
ELLL+SAFVQ +D+ D+ P ++PAF+H+L+ E+G+ ++ VIECD LV +G +
Sbjct: 312 ELLLDSAFVQPPADQTPDSSPDIRPAFKHVLRQPIIENGRLKKKHWVIECDHLVHEGFES 371
Query: 362 TARHXXXXXXXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
TARH K WKGYD GGHLFLPSY MRTHG K+Q
Sbjct: 372 TARHVDIPYLPMLVPPKKWKGYDKGGHLFLPSYIMRTHGVKDQ 414
>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
Length = 976
Score = 143 bits (360), Expect = 3e-32
Identities = 79/154 (51%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
Frame = +2
Query: 32 LEKHEEIXXXXXXXXXXXXXXIEVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQ 211
L K +EI EV+KLL E E++ WGRD QAKLG RLIELL E+A+VQ
Sbjct: 286 LSKEKEILRKRVNGLIRRKRLNEVQKLLIKE-EMKPWGRDKQAKLGSRLIELLTETAYVQ 344
Query: 212 VGSDRLEDTIPVVQPAFRHMLKHIPNEDG-KSVSRYGVIECDPLVRKGLNNTARHXXXXX 388
+L D+ P V+PAFRH K + G K V YGVIECDPLV GL+ TA+H
Sbjct: 345 PPLSQLADSPPDVRPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPY 404
Query: 389 XXXXXXXKSWKGYDLGGHLFLPSYAMRTHGAKEQ 490
K WKGYD GGHLFLPSY MRTHG+++Q
Sbjct: 405 VPMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQ 438
>gb|AAB01085.2| single-subunit RNA polymerase C [Triticum aestivum]
Length = 949
Score = 143 bits (360), Expect = 3e-32
Identities = 68/131 (51%), Positives = 89/131 (67%)
Frame = +2
Query: 98 EVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQVGSDRLEDTIPVVQPAFRHMLK 277
E +KL++ E+E+E WG + Q KLG RLIELLL+SAFVQ +D+ D+ P +PAF+H+L+
Sbjct: 281 EAQKLVQQEIELEEWGTEAQVKLGTRLIELLLDSAFVQSPADQTPDSSPDFRPAFKHVLR 340
Query: 278 HIPNEDGKSVSRYGVIECDPLVRKGLNNTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPS 457
E+G+ ++ VIECDPLV +G +TARH WKGYD GGHLFLPS
Sbjct: 341 KPIVENGRLKKKHFVIECDPLVHEGFESTARHVEIPYLPMLVPPTKWKGYDKGGHLFLPS 400
Query: 458 YAMRTHGAKEQ 490
Y MRTHG K+Q
Sbjct: 401 YVMRTHGVKDQ 411
>ref|NP_001058231.2| Os06g0652000 [Oryza sativa Japonica Group]
gi|51534999|dbj|BAD38123.1| putative T7
bacteriophage-type single subunit RNA polymerase [Oryza
sativa Japonica Group] gi|255677283|dbj|BAF20145.2|
Os06g0652000 [Oryza sativa Japonica Group]
Length = 806
Score = 143 bits (360), Expect = 3e-32
Identities = 66/131 (50%), Positives = 91/131 (69%)
Frame = +2
Query: 98 EVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQVGSDRLEDTIPVVQPAFRHMLK 277
E +K+++ E+E+E WG + Q KLG RLIELLL+SAFVQ +D+ ++ P ++PAF+H+L+
Sbjct: 138 EAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPDIRPAFKHVLR 197
Query: 278 HIPNEDGKSVSRYGVIECDPLVRKGLNNTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPS 457
E+G+ ++ VIECDPLV +G +TARH K WKGYD GG+LFLPS
Sbjct: 198 QPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDTGGYLFLPS 257
Query: 458 YAMRTHGAKEQ 490
Y MRTHG K+Q
Sbjct: 258 YIMRTHGVKDQ 268
>dbj|BAC76605.1| RpoT2 [Oryza sativa Japonica Group] gi|37360971|dbj|BAC98394.1| T7
bacteriophage-type single subunit RNA polymerase [Oryza
sativa Japonica Group]
Length = 953
Score = 143 bits (360), Expect = 3e-32
Identities = 66/131 (50%), Positives = 91/131 (69%)
Frame = +2
Query: 98 EVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQVGSDRLEDTIPVVQPAFRHMLK 277
E +K+++ E+E+E WG + Q KLG RLIELLL+SAFVQ +D+ ++ P ++PAF+H+L+
Sbjct: 285 EAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPDIRPAFKHVLR 344
Query: 278 HIPNEDGKSVSRYGVIECDPLVRKGLNNTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPS 457
E+G+ ++ VIECDPLV +G +TARH K WKGYD GG+LFLPS
Sbjct: 345 QPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDTGGYLFLPS 404
Query: 458 YAMRTHGAKEQ 490
Y MRTHG K+Q
Sbjct: 405 YIMRTHGVKDQ 415
>ref|XP_002437374.1| hypothetical protein SORBIDRAFT_10g025820 [Sorghum bicolor]
gi|241915597|gb|EER88741.1| hypothetical protein
SORBIDRAFT_10g025820 [Sorghum bicolor]
Length = 960
Score = 143 bits (360), Expect = 3e-32
Identities = 68/131 (51%), Positives = 90/131 (68%)
Frame = +2
Query: 98 EVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQVGSDRLEDTIPVVQPAFRHMLK 277
E +KL++ ELE+E WG + Q KLG RLIELLL+SAFVQ +D++ D+ P ++PAF+H+L+
Sbjct: 291 EAQKLVQQELELEEWGTEAQVKLGSRLIELLLDSAFVQPPADQIPDSSPDIRPAFKHVLR 350
Query: 278 HIPNEDGKSVSRYGVIECDPLVRKGLNNTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPS 457
E+G+ ++ VIECD LV G +TARH K WKGY+ GGHLFLPS
Sbjct: 351 QPIIENGRLKKKHWVIECDHLVHDGFESTARHVDIPYLPMLVPPKKWKGYNKGGHLFLPS 410
Query: 458 YAMRTHGAKEQ 490
Y MRTHG K+Q
Sbjct: 411 YIMRTHGVKDQ 421
>gb|EEE66135.1| hypothetical protein OsJ_22187 [Oryza sativa Japonica Group]
Length = 946
Score = 143 bits (360), Expect = 3e-32
Identities = 66/131 (50%), Positives = 91/131 (69%)
Frame = +2
Query: 98 EVKKLLKNELEIESWGRDGQAKLGCRLIELLLESAFVQVGSDRLEDTIPVVQPAFRHMLK 277
E +K+++ E+E+E WG + Q KLG RLIELLL+SAFVQ +D+ ++ P ++PAF+H+L+
Sbjct: 278 EAQKIVQQEIELEEWGTESQVKLGTRLIELLLDSAFVQSPADQTPESSPDIRPAFKHVLR 337
Query: 278 HIPNEDGKSVSRYGVIECDPLVRKGLNNTARHXXXXXXXXXXXXKSWKGYDLGGHLFLPS 457
E+G+ ++ VIECDPLV +G +TARH K WKGYD GG+LFLPS
Sbjct: 338 QPIVENGRLKKKHWVIECDPLVHEGFESTARHVEIPYLPMLVTPKKWKGYDTGGYLFLPS 397
Query: 458 YAMRTHGAKEQ 490
Y MRTHG K+Q
Sbjct: 398 YIMRTHGVKDQ 408