BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00052001
         (283 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus...    60   2e-07
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr...    60   4e-07
gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus pe...    58   1e-06
ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06
ref|XP_006827256.1| hypothetical protein AMTR_s00010p00262470 [A...    57   3e-06
ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Caps...    55   7e-06
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_002316137.1| pentatricopeptide repeat-containing family p...    55   1e-05

>gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
          Length = 600

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
 Frame = +3

Query: 96  LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC---PPSAS-DYARSLFDQIPHPD 263
           L+ +C+SLR+L+Q+ A  IK  LH+    + +LI  C   P +AS DYA  +FDQIP PD
Sbjct: 31  LIPKCTSLRELKQIQAYTIKTHLHNSGTVLTKLINFCTCNPTTASMDYAHQMFDQIPQPD 90

Query: 264 SVLFN 278
            VLFN
Sbjct: 91  IVLFN 95


>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Fragaria vesca subsp. vesca]
          Length = 593

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
 Frame = +3

Query: 96  LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCP--PSAS--DYARSLFDQIPHPD 263
           L+ +C+SL  LQQ+ A +IK  L +    +++LI SC   P+A+  DYA  LFDQIPHPD
Sbjct: 24  LIPKCTSLTQLQQIQAFSIKTHLQYDLSVLSKLINSCTLNPTATSMDYAHQLFDQIPHPD 83

Query: 264 SVLFN 278
            V+FN
Sbjct: 84  IVVFN 88


>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
           gi|557092383|gb|ESQ33030.1| hypothetical protein
           EUTSA_v10003852mg [Eutrema salsugineum]
          Length = 605

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
 Frame = +3

Query: 96  LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC----PPSASDYARSLFDQIPHPD 263
           L++RC+SLR+L Q+   AIK  LH    F+ +LI  C      S+  YAR LFD +P PD
Sbjct: 35  LISRCTSLRELMQIQGYAIKSHLHEDVSFITKLINFCTEYPTTSSMSYARQLFDAMPEPD 94

Query: 264 SVLFN 278
            V+FN
Sbjct: 95  IVVFN 99


>gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
          Length = 593

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
 Frame = +3

Query: 96  LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC---PPSAS-DYARSLFDQIPHPD 263
           L+ +C+SLR+L+Q+ A +IK  L +    + +LI  C   P   S DYA  LFDQIPHPD
Sbjct: 24  LIPKCTSLRELKQIQAFSIKTHLQYDISVLTKLINFCTLNPTGTSMDYAHHLFDQIPHPD 83

Query: 264 SVLFN 278
            V+FN
Sbjct: 84  IVVFN 88


>ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like isoform X1 [Setaria italica]
           gi|514813325|ref|XP_004981446.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like isoform X2 [Setaria italica]
           gi|514813327|ref|XP_004981447.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like isoform X3 [Setaria italica]
          Length = 605

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
 Frame = +3

Query: 99  LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC-----PPSASDYARSLFDQIPHP- 260
           L  C+SLR L QLHA A+K  L   P FV RL+  C      P+   YAR +FD++PHP 
Sbjct: 31  LPHCTSLRSLAQLHAAAVKAGLAAHPAFVTRLLTLCTAPGAAPAHLAYARQVFDRVPHPA 90

Query: 261 DSVLFN 278
           D+V +N
Sbjct: 91  DAVWYN 96


>ref|XP_006827256.1| hypothetical protein AMTR_s00010p00262470 [Amborella trichopoda]
           gi|548831685|gb|ERM94493.1| hypothetical protein
           AMTR_s00010p00262470 [Amborella trichopoda]
          Length = 354

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
 Frame = +3

Query: 96  LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCP---PSASDYARSLFDQIPHPDS 266
           LL+RC++L  L+Q+ A  IK  L +  P +++L + C    P   +YA+ LFDQIP P++
Sbjct: 31  LLSRCATLSQLKQIQANTIKTHLQNHAPTLSKLASFCSLSLPEHIEYAQQLFDQIPEPNT 90

Query: 267 VLFN 278
           VLFN
Sbjct: 91  VLFN 94


>ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Solanum lycopersicum]
          Length = 605

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
 Frame = +3

Query: 96  LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC----PPSASDYARSLFDQIPHPD 263
           L+ +C SLRDL+Q+ A +IK QL +   F+++LI  C     P+   +A  LFD+IP PD
Sbjct: 36  LVPKCKSLRDLKQIQAFSIKTQLQNDIFFMSKLINFCTKNPTPACMYHAHLLFDKIPQPD 95

Query: 264 SVLFN 278
            VLFN
Sbjct: 96  IVLFN 100


>ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Capsella rubella]
           gi|482559454|gb|EOA23645.1| hypothetical protein
           CARUB_v10016843mg [Capsella rubella]
          Length = 630

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
 Frame = +3

Query: 99  LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASCPPSASD----YARSLFDQIPHPDS 266
           ++RC SLR+L Q+   AIK  LH    F+ +LI  C  S ++    YAR LFD +  PD 
Sbjct: 62  ISRCKSLRELMQIQGYAIKSHLHEDVSFITKLINFCTESPTESSMSYARHLFDAMSEPDI 121

Query: 267 VLFN 278
           V+FN
Sbjct: 122 VIFN 125


>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
           protein product [Vitis vinifera]
          Length = 595

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
 Frame = +3

Query: 96  LLARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC---PPSAS-DYARSLFDQIPHPD 263
           LL +C+SLR+L+QL A AIK  LH     + + I  C   P + S  +A  LFDQIP PD
Sbjct: 26  LLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPD 85

Query: 264 SVLFN 278
            VLFN
Sbjct: 86  IVLFN 90


>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222865177|gb|EEF02308.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 601

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
 Frame = +3

Query: 99  LARCSSLRDLQQLHALAIKYQLHHRPPFVARLIASC---PPSAS-DYARSLFDQIPHPDS 266
           L +C+SL++L+Q+ A +IK  L +    + +LI SC   P +AS DYA  LF+ IP PD 
Sbjct: 33  LPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDI 92

Query: 267 VLFN 278
           VLFN
Sbjct: 93  VLFN 96