BLASTX nr result
ID: Zingiber24_contig00051962
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00051962
(320 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_006362625.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 125 4e-27
ref|XP_004301149.1| PREDICTED: pentatricopeptide repeat-containi... 125 6e-27
ref|XP_002328557.1| predicted protein [Populus trichocarpa] 124 2e-26
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi... 123 2e-26
gb|EMJ12484.1| hypothetical protein PRUPE_ppa002699mg [Prunus pe... 123 3e-26
ref|NP_177601.1| pentatricopeptide repeat-containing protein [Ar... 121 1e-25
dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana] gi|6... 121 1e-25
ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat... 120 2e-25
gb|EXB44682.1| hypothetical protein L484_015939 [Morus notabilis] 120 2e-25
ref|XP_006390406.1| hypothetical protein EUTSA_v10018254mg [Eutr... 120 2e-25
ref|XP_006301886.1| hypothetical protein CARUB_v10022358mg [Caps... 119 3e-25
gb|ESW27309.1| hypothetical protein PHAVU_003G190600g [Phaseolus... 119 4e-25
gb|EOY21836.1| Tetratricopeptide repeat (TPR)-like superfamily p... 119 5e-25
ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago t... 117 1e-24
ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containi... 113 2e-23
ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containi... 113 2e-23
ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi... 113 2e-23
gb|EOY17416.1| Tetratricopeptide repeat (TPR)-like superfamily p... 113 3e-23
>ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 127 bits (319), Expect = 2e-27
Identities = 58/69 (84%), Positives = 63/69 (91%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFG+AR+ KGS+IRIVKNLR+CRDCH VMK ISKVY E+VVRDRSRFHSFK
Sbjct: 575 HSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKT 634
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 635 GSCSCRDYW 643
>ref|XP_006362625.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g74630-like [Solanum tuberosum]
Length = 526
Score = 125 bits (315), Expect = 4e-27
Identities = 57/69 (82%), Positives = 62/69 (89%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFGMAR+ KGS IRIVKNLR+C+DCH MK ISKVY E+VVRDRSRFHSFK+
Sbjct: 458 HSEKLAVAFGMARLCKGSTIRIVKNLRVCKDCHSFMKLISKVYGLEIVVRDRSRFHSFKE 517
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 518 GSCSCRDYW 526
>ref|XP_004301149.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Fragaria vesca subsp. vesca]
Length = 643
Score = 125 bits (314), Expect = 6e-27
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFG+AR+ +G +IRIVKNLR+CRDCH VMK ISKVY E+VVRDRSRFHSFKD
Sbjct: 575 HSEKLAVAFGLARLPEGRMIRIVKNLRVCRDCHTVMKLISKVYRSEIVVRDRSRFHSFKD 634
Query: 183 GSCSCRDYW 209
GSCSC DYW
Sbjct: 635 GSCSCNDYW 643
>ref|XP_002328557.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 124 bits (310), Expect = 2e-26
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFG+AR+ KG IRIVKNLRICRDCH VMK IS++Y+ E+VVRDRSRFHSFKD
Sbjct: 575 HSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKD 634
Query: 183 GSCSCRDYW 209
G CSCRDYW
Sbjct: 635 GYCSCRDYW 643
>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 123 bits (309), Expect = 2e-26
Identities = 56/69 (81%), Positives = 61/69 (88%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFGMA++ +G IR+VKNLRICRDCH VMK ISKVYE E+VVRDRSRFHSF
Sbjct: 574 HSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTH 633
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 634 GSCSCRDYW 642
>gb|EMJ12484.1| hypothetical protein PRUPE_ppa002699mg [Prunus persica]
Length = 643
Score = 123 bits (308), Expect = 3e-26
Identities = 56/69 (81%), Positives = 61/69 (88%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFG+AR+ G IRIVKNLR+CRDCH VMK ISKVY E+VVRDRSRFHSFKD
Sbjct: 575 HSEKLAVAFGLARLRVGMNIRIVKNLRVCRDCHTVMKLISKVYRLEIVVRDRSRFHSFKD 634
Query: 183 GSCSCRDYW 209
GSCSC+DYW
Sbjct: 635 GSCSCKDYW 643
>ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g74630 gi|12324801|gb|AAG52363.1|AC011765_15
hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 121 bits (303), Expect = 1e-25
Identities = 55/69 (79%), Positives = 62/69 (89%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA+AF +AR+SKG+ IRIVKNLRICRDCH VMK SKVY E++VRDR+RFHSFKD
Sbjct: 575 HSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKD 634
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 635 GSCSCRDYW 643
>dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein
[Arabidopsis thaliana]
Length = 635
Score = 121 bits (303), Expect = 1e-25
Identities = 55/69 (79%), Positives = 62/69 (89%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA+AF +AR+SKG+ IRIVKNLRICRDCH VMK SKVY E++VRDR+RFHSFKD
Sbjct: 567 HSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKD 626
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 627 GSCSCRDYW 635
>ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 1428
Score = 120 bits (301), Expect = 2e-25
Identities = 52/69 (75%), Positives = 61/69 (88%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA AFG+A++ KG ++RIVKNLR+C DCH VMK ISKVY+ E++VRDRSRFHSFKD
Sbjct: 1360 HSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKD 1419
Query: 183 GSCSCRDYW 209
G CSCRDYW
Sbjct: 1420 GFCSCRDYW 1428
>gb|EXB44682.1| hypothetical protein L484_015939 [Morus notabilis]
Length = 644
Score = 120 bits (300), Expect = 2e-25
Identities = 57/69 (82%), Positives = 60/69 (86%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFGMAR+ +G IRIVKNLRICRDCH VMK ISKVY E+VVRDRSRFHSF
Sbjct: 576 HSEKLAVAFGMARLQEGKDIRIVKNLRICRDCHIVMKLISKVYGVEIVVRDRSRFHSFVA 635
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 636 GSCSCRDYW 644
>ref|XP_006390406.1| hypothetical protein EUTSA_v10018254mg [Eutrema salsugineum]
gi|557086840|gb|ESQ27692.1| hypothetical protein
EUTSA_v10018254mg [Eutrema salsugineum]
Length = 645
Score = 120 bits (300), Expect = 2e-25
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA+AF +AR+SKG+ IRIVKNLRICRDCH VMK S+VY E++VRDR+RFHSFKD
Sbjct: 577 HSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSRVYGVEILVRDRNRFHSFKD 636
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 637 GSCSCRDYW 645
>ref|XP_006301886.1| hypothetical protein CARUB_v10022358mg [Capsella rubella]
gi|482570596|gb|EOA34784.1| hypothetical protein
CARUB_v10022358mg [Capsella rubella]
Length = 643
Score = 119 bits (299), Expect = 3e-25
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA+AF +AR+ KG IRIVKNLRICRDCH VMK SKVY E+VVRDR+RFHSFKD
Sbjct: 575 HSEKLALAFAVARLPKGENIRIVKNLRICRDCHAVMKLTSKVYGVEIVVRDRNRFHSFKD 634
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 635 GSCSCRDYW 643
>gb|ESW27309.1| hypothetical protein PHAVU_003G190600g [Phaseolus vulgaris]
Length = 626
Score = 119 bits (298), Expect = 4e-25
Identities = 51/69 (73%), Positives = 60/69 (86%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA AFG+A++ KG ++RIVKNLR+C DCH VMK ISK+Y E++VRDRSRFHSFKD
Sbjct: 558 HSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKIYRVEIIVRDRSRFHSFKD 617
Query: 183 GSCSCRDYW 209
G CSCRDYW
Sbjct: 618 GFCSCRDYW 626
>gb|EOY21836.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 643
Score = 119 bits (297), Expect = 5e-25
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFG++R+ KG IRIVKNLRICRDCH VMK ISKVY +VVVRDRSRFH F D
Sbjct: 575 HSEKLAVAFGISRLCKGRDIRIVKNLRICRDCHTVMKLISKVYGLKVVVRDRSRFHMFND 634
Query: 183 GSCSCRDYW 209
GSCSC+DYW
Sbjct: 635 GSCSCKDYW 643
>ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 611
Score = 117 bits (294), Expect = 1e-24
Identities = 51/69 (73%), Positives = 60/69 (86%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA AFG+A++ KG ++RIVKNLR+C DCH VMK ISKVY+ E++VRDRSRFHSFK
Sbjct: 543 HSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKG 602
Query: 183 GSCSCRDYW 209
G CSCRDYW
Sbjct: 603 GFCSCRDYW 611
>ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 117 bits (293), Expect = 2e-24
Identities = 49/69 (71%), Positives = 58/69 (84%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA+AFG+ R G +RI KNLR+CRDCH KFIS+V+ERE+VVRDR+RFH FKD
Sbjct: 531 HSEKLAIAFGLLRTRPGDTVRITKNLRVCRDCHEATKFISRVFEREIVVRDRNRFHHFKD 590
Query: 183 GSCSCRDYW 209
G+CSCRDYW
Sbjct: 591 GTCSCRDYW 599
>ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum tuberosum]
Length = 628
Score = 113 bits (283), Expect = 2e-23
Identities = 45/69 (65%), Positives = 58/69 (84%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA+AFG+ + G ++RI KNLR+C+DCH+ KFISKVY+RE++VRDR+RFH FK
Sbjct: 560 HSEKLAIAFGLLKSKPGEILRITKNLRVCKDCHQASKFISKVYDREIIVRDRNRFHHFKG 619
Query: 183 GSCSCRDYW 209
G CSC+DYW
Sbjct: 620 GECSCKDYW 628
>ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 113 bits (283), Expect = 2e-23
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLA+AFG+ S+G+ IRIVKNLR+C DCH +K ISK+ ERE+VVRDRSRFH FKD
Sbjct: 564 HSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKD 623
Query: 183 GSCSCRDYW 209
G CSC DYW
Sbjct: 624 GKCSCNDYW 632
>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 113 bits (283), Expect = 2e-23
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFG+ S+G+ IR+ KNLRIC DCH V+K ISK+Y++E++VRDR+RFH FKD
Sbjct: 505 HSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHVVIKLISKIYDQEIIVRDRARFHRFKD 564
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 565 GSCSCRDYW 573
>gb|EOY17416.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 574
Score = 113 bits (282), Expect = 3e-23
Identities = 48/69 (69%), Positives = 60/69 (86%)
Frame = +3
Query: 3 HSEKLAVAFGMARMSKGSVIRIVKNLRICRDCHRVMKFISKVYEREVVVRDRSRFHSFKD 182
HSEKLAVAFG+ ++G+ I+++KNLRIC DCH V+K ISK+YERE++VRDR RFH F+D
Sbjct: 506 HSEKLAVAFGLISTNEGTPIQVIKNLRICGDCHVVIKHISKIYEREIIVRDRVRFHRFRD 565
Query: 183 GSCSCRDYW 209
GSCSCRDYW
Sbjct: 566 GSCSCRDYW 574