BLASTX nr result
ID: Zingiber24_contig00051806
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00051806
(229 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat... 95 1e-17
gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus pe... 94 2e-17
ref|XP_002308333.2| pentatricopeptide repeat-containing family p... 94 2e-17
ref|XP_002333469.1| predicted protein [Populus trichocarpa] 94 2e-17
ref|XP_003575543.1| PREDICTED: putative pentatricopeptide repeat... 92 7e-17
ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citr... 91 2e-16
ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat... 90 4e-16
gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protei... 90 4e-16
ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat... 90 4e-16
ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat... 90 4e-16
ref|XP_004971739.1| PREDICTED: putative pentatricopeptide repeat... 89 6e-16
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat... 89 6e-16
ref|NP_001066728.1| Os12g0456100 [Oryza sativa Japonica Group] g... 88 1e-15
gb|EAY83026.1| hypothetical protein OsI_38244 [Oryza sativa Indi... 88 1e-15
ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutr... 87 2e-15
ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [A... 87 2e-15
ref|XP_002454370.1| hypothetical protein SORBIDRAFT_04g029550 [S... 86 4e-15
gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis] 86 7e-15
ref|NP_196258.1| pentatricopeptide repeat-containing protein [Ar... 85 9e-15
gb|ESW17764.1| hypothetical protein PHAVU_007G266200g [Phaseolus... 84 2e-14
>ref|XP_004497693.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cicer arietinum]
Length = 1045
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/75 (56%), Positives = 57/75 (76%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LFR Y+ AC LY+EML GI+PD IT MVAGHV H +IS+AW++F++M++ G K
Sbjct: 452 QHLFRLSRYEEACMLYDEMLGKGIKPDIVAITAMVAGHVSHNRISEAWKIFKSMELQGIK 511
Query: 47 PTSEAYSVFVSELCQ 3
PT ++YSVF+ ELC+
Sbjct: 512 PTWKSYSVFIKELCK 526
>gb|EMJ05692.1| hypothetical protein PRUPE_ppa019635mg [Prunus persica]
Length = 893
Score = 94.0 bits (232), Expect = 2e-17
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF+ +YQ C LYEEML +G+EPDS IT +VAGHV+ IS+AW+VF MK G +
Sbjct: 300 QHLFKLNEYQKGCELYEEMLESGVEPDSVAITAVVAGHVRQNHISEAWKVFNKMKEKGIE 359
Query: 47 PTSEAYSVFVSELCQ 3
PT ++YSVF+ ELC+
Sbjct: 360 PTVKSYSVFIKELCR 374
>ref|XP_002308333.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550336797|gb|EEE91856.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1048
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LFRS +YQ C LY+EML G+E DS + +VAGHV+ IS+AWEVFETM+ G K
Sbjct: 456 QHLFRSNEYQKCCELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIK 515
Query: 47 PTSEAYSVFVSELCQ 3
PT ++YS+F+ ELC+
Sbjct: 516 PTWKSYSIFIKELCK 530
>ref|XP_002333469.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 93.6 bits (231), Expect = 2e-17
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LFRS +YQ C LY+EML G+E DS + +VAGHV+ IS+AWEVFETM+ G K
Sbjct: 456 QHLFRSNEYQKCCELYDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIK 515
Query: 47 PTSEAYSVFVSELCQ 3
PT ++YS+F+ ELC+
Sbjct: 516 PTWKSYSIFIKELCK 530
>ref|XP_003575543.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Brachypodium distachyon]
Length = 1109
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/75 (52%), Positives = 54/75 (72%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF Y+ AC LYEEM +NG+ PD TIT ++AGH+ + ISKAW+V +K NG++
Sbjct: 489 QHLFTFDQYEAACELYEEMQKNGVPPDIVTITALIAGHISNGHISKAWDVLRRIKENGQR 548
Query: 47 PTSEAYSVFVSELCQ 3
PT +AY+VF+ ELC+
Sbjct: 549 PTMKAYTVFIQELCK 563
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = -3
Query: 218 FRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRKPTS 39
FR D A +++EM NG EP T + ++ G++ +S+AW+VFE MK+ G P
Sbjct: 974 FRKRDVAKAVDMFKEMAENGCEPTVITYSALIRGYMGMGMVSEAWDVFERMKLKGPSPDF 1033
Query: 38 EAYSVFVSELCQ 3
E YS+F++ LC+
Sbjct: 1034 ETYSMFMTFLCK 1045
>ref|XP_006430030.1| hypothetical protein CICLE_v10010964mg [Citrus clementina]
gi|557532087|gb|ESR43270.1| hypothetical protein
CICLE_v10010964mg [Citrus clementina]
Length = 1040
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/75 (52%), Positives = 55/75 (73%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF+ DY+ C LY EML+ GI+PDS +T MVAGHV+ +S+AW+VF+ M+ G +
Sbjct: 447 QHLFKLNDYKKGCELYNEMLKRGIQPDSVAVTAMVAGHVRQDNLSEAWKVFKCMEDKGIR 506
Query: 47 PTSEAYSVFVSELCQ 3
PT ++YSVF+ ELC+
Sbjct: 507 PTRKSYSVFIKELCR 521
>ref|XP_006481630.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Citrus sinensis]
Length = 1040
Score = 89.7 bits (221), Expect = 4e-16
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF+ +Y+ C LY EML+ GI+PDS +T MVAGHV+ +S+AW+VF+ M+ G +
Sbjct: 447 QHLFKLNEYKKGCELYNEMLKRGIQPDSVAVTAMVAGHVRQDNLSEAWKVFKCMEDKGIR 506
Query: 47 PTSEAYSVFVSELCQ 3
PT ++YSVF+ ELC+
Sbjct: 507 PTGKSYSVFIKELCR 521
>gb|EOY08539.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 1050
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LFR YQ C LY EML+ G+EPDS I MVAGHV+ IS+AWEVF++M+ +
Sbjct: 458 QHLFRLNKYQKGCDLYNEMLQKGVEPDSVAIMAMVAGHVRQKHISEAWEVFKSMEDRSIR 517
Query: 47 PTSEAYSVFVSELCQ 3
PT AYS+F+ ELC+
Sbjct: 518 PTWTAYSIFIKELCK 532
>ref|XP_004303386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like isoform 2 [Fragaria vesca
subsp. vesca]
Length = 1037
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF ++Q C LY+EML G+EPDS +T +VAGHV+ IS+AW+VF MK G K
Sbjct: 452 QHLFNMNEHQKGCELYDEMLERGVEPDSVAVTAIVAGHVRQNHISEAWKVFIHMKDKGIK 511
Query: 47 PTSEAYSVFVSELCQ 3
PTS++Y VF+ ELC+
Sbjct: 512 PTSKSYMVFIKELCK 526
>ref|XP_004303385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 1038
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF ++Q C LY+EML G+EPDS +T +VAGHV+ IS+AW+VF MK G K
Sbjct: 452 QHLFNMNEHQKGCELYDEMLERGVEPDSVAVTAIVAGHVRQNHISEAWKVFIHMKDKGIK 511
Query: 47 PTSEAYSVFVSELCQ 3
PTS++Y VF+ ELC+
Sbjct: 512 PTSKSYMVFIKELCK 526
>ref|XP_004971739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Setaria italica]
Length = 1077
Score = 89.0 bits (219), Expect = 6e-16
Identities = 37/75 (49%), Positives = 54/75 (72%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF Y+ AC L+EEML+NG+EPD T+T ++ GHV+ IS+AW+ F + +G+K
Sbjct: 463 QHLFSIDQYEEACGLFEEMLKNGVEPDIVTLTALIGGHVRSGHISEAWDAFRNINKSGQK 522
Query: 47 PTSEAYSVFVSELCQ 3
PT +AY+VF+ ELC+
Sbjct: 523 PTLKAYTVFIQELCK 537
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = -3
Query: 218 FRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRKPTS 39
F D A + +EM NG EP T + ++ G++ +S+AW+VF+ MK+ G P
Sbjct: 946 FHKRDVVKALDVLKEMKENGCEPTVVTHSALIRGYMAMGMVSEAWDVFQQMKLKGPAPDF 1005
Query: 38 EAYSVFVSELCQ 3
YS+F+S LC+
Sbjct: 1006 GTYSMFISCLCK 1017
>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LFR +YQ C LY+EML G+EPDS IT MVAGHV+ I +AW+VF +M+ G +
Sbjct: 457 QHLFRLNEYQKGCKLYDEMLERGVEPDSVAITAMVAGHVRQNHIFEAWKVFNSMQERGIR 516
Query: 47 PTSEAYSVFVSELCQ 3
T ++YSVF+ ELC+
Sbjct: 517 ATWKSYSVFIKELCK 531
>ref|NP_001066728.1| Os12g0456100 [Oryza sativa Japonica Group]
gi|77555567|gb|ABA98363.1| hypothetical protein
LOC_Os12g27060 [Oryza sativa Japonica Group]
gi|113649235|dbj|BAF29747.1| Os12g0456100 [Oryza sativa
Japonica Group] gi|125579252|gb|EAZ20398.1| hypothetical
protein OsJ_36005 [Oryza sativa Japonica Group]
Length = 1117
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF ++ AC LYEEM NGIEPD IT ++ GHV++ IS+AW+ F + NG+K
Sbjct: 493 QHLFAFDQHEAACRLYEEMQENGIEPDVVAITALIGGHVRNGHISEAWDAFRNINENGQK 552
Query: 47 PTSEAYSVFVSELCQ 3
PT +AY+VF+ ELC+
Sbjct: 553 PTLKAYTVFIQELCK 567
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = -3
Query: 206 DYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRKPTSEAYS 27
D A + +EM NG EP T + ++ GH+ +S+AW+VF+ MK+ G P E YS
Sbjct: 982 DVSKAMDVLKEMTENGCEPTVVTYSALIRGHMAMGMVSEAWDVFQRMKLKGPVPDFETYS 1041
Query: 26 VFVSELCQ 3
+F+S LC+
Sbjct: 1042 MFMSCLCK 1049
>gb|EAY83026.1| hypothetical protein OsI_38244 [Oryza sativa Indica Group]
Length = 1117
Score = 87.8 bits (216), Expect = 1e-15
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF ++ AC LYEEM NGIEPD IT ++ GHV++ IS+AW+ F + NG+K
Sbjct: 493 QHLFAFDQHEAACRLYEEMQENGIEPDVVAITALIGGHVRNGHISEAWDAFRNINENGQK 552
Query: 47 PTSEAYSVFVSELCQ 3
PT +AY+VF+ ELC+
Sbjct: 553 PTLKAYTVFIQELCK 567
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = -3
Query: 206 DYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRKPTSEAYS 27
D A + +EM NG EP T + ++ GH+ +S+AW+VF+ MK+ G P E YS
Sbjct: 982 DVSKAMDVLKEMTENGCEPTVVTYSALIRGHMAMGMVSEAWDVFQRMKLKGPVPDFETYS 1041
Query: 26 VFVSELCQ 3
+F+S LC+
Sbjct: 1042 MFMSCLCK 1049
>ref|XP_006399113.1| hypothetical protein EUTSA_v10012543mg [Eutrema salsugineum]
gi|557100203|gb|ESQ40566.1| hypothetical protein
EUTSA_v10012543mg [Eutrema salsugineum]
Length = 1036
Score = 87.0 bits (214), Expect = 2e-15
Identities = 37/75 (49%), Positives = 54/75 (72%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF+ +Q C L+ EM+ NGIEPD+ IT +VAGH+ Q+++AW+VF +M+ G K
Sbjct: 446 QHLFKMKQFQKGCNLFREMIENGIEPDNVAITAVVAGHLGQNQVAEAWKVFSSMEEKGIK 505
Query: 47 PTSEAYSVFVSELCQ 3
PT ++YS+FV ELC+
Sbjct: 506 PTWKSYSIFVKELCR 520
>ref|XP_006826424.1| hypothetical protein AMTR_s00004p00162290 [Amborella trichopoda]
gi|548830738|gb|ERM93661.1| hypothetical protein
AMTR_s00004p00162290 [Amborella trichopoda]
Length = 961
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/75 (53%), Positives = 51/75 (68%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LFR Y+ C LYEEM +G+EPD +T +VAGHV H Q SKA E F+ MK G K
Sbjct: 361 QHLFRMNAYEEGCRLYEEMKESGLEPDVVAMTALVAGHVCHSQFSKAKEAFDNMKERGIK 420
Query: 47 PTSEAYSVFVSELCQ 3
PT +AYS+++ ELC+
Sbjct: 421 PTWKAYSIYIKELCK 435
>ref|XP_002454370.1| hypothetical protein SORBIDRAFT_04g029550 [Sorghum bicolor]
gi|241934201|gb|EES07346.1| hypothetical protein
SORBIDRAFT_04g029550 [Sorghum bicolor]
Length = 952
Score = 86.3 bits (212), Expect = 4e-15
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF + AC L+EEML+N +EPD T T ++ GHV+ ISKAW+VF + NG+K
Sbjct: 500 QHLFAIDQCEEACGLFEEMLKNSVEPDIVTFTALICGHVRSGHISKAWDVFRNINKNGQK 559
Query: 47 PTSEAYSVFVSELCQ 3
PT +AY+VF+ ELC+
Sbjct: 560 PTLKAYTVFMRELCK 574
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = -3
Query: 206 DYQTACTLYEEM--LRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRKPTSEA 33
D++ LY+EM NG EP T + ++ G++ +S+AW VF+ MKM G P E
Sbjct: 777 DFKHMRYLYKEMEMKENGCEPTVVTFSALIRGYMAMGMVSEAWAVFQQMKMRGPAPDFET 836
Query: 32 YSVFVSELCQ 3
YS+F+S LC+
Sbjct: 837 YSMFMSCLCK 846
>gb|EXC12963.1| hypothetical protein L484_016893 [Morus notabilis]
Length = 1039
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/75 (53%), Positives = 52/75 (69%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LFR Y+ C LY EML G+E DS IT MVAGHV+ ++S+AW+VF +M+ G
Sbjct: 448 QHLFRLKQYEKGCELYNEMLERGVERDSVAITAMVAGHVRANRVSEAWKVFRSMEDKGVW 507
Query: 47 PTSEAYSVFVSELCQ 3
PT +AYS+FV ELC+
Sbjct: 508 PTWKAYSIFVKELCR 522
>ref|NP_196258.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171850|sp|Q9FNG8.1|PP366_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g06400, mitochondrial; Flags: Precursor
gi|9758420|dbj|BAB08962.1| unnamed protein product
[Arabidopsis thaliana] gi|332003627|gb|AED91010.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 1030
Score = 85.1 bits (209), Expect = 9e-15
Identities = 36/75 (48%), Positives = 54/75 (72%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LF+ ++ C L+ EM+ NGIEPDS IT +VAGH+ ++++AW+VF +M+ G K
Sbjct: 441 QHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIK 500
Query: 47 PTSEAYSVFVSELCQ 3
PT ++YS+FV ELC+
Sbjct: 501 PTWKSYSIFVKELCR 515
>gb|ESW17764.1| hypothetical protein PHAVU_007G266200g [Phaseolus vulgaris]
Length = 1069
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = -3
Query: 227 QELFRSGDYQTACTLYEEMLRNGIEPDSATITDMVAGHVQHYQISKAWEVFETMKMNGRK 48
Q LFR Y+ AC +Y+EML GI+PD IT MVAGHV +IS+AW++F M+ K
Sbjct: 477 QHLFRLSRYEEACMMYDEMLGKGIKPDIVAITAMVAGHVSQNRISEAWKMFNCMECQDIK 536
Query: 47 PTSEAYSVFVSELCQ 3
PT ++Y+VF+ ELC+
Sbjct: 537 PTWKSYAVFIKELCK 551