BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00051771
         (265 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-c...   124   1e-26
ref|NP_177628.2| pentatricopeptide repeat-containing protein [Ar...   124   1e-26
ref|XP_006390373.1| hypothetical protein EUTSA_v10018527mg [Eutr...   124   2e-26
ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp....   124   2e-26
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]           122   4e-26
gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus...   122   5e-26
ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Caps...   122   5e-26
ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citr...   120   1e-25
ref|XP_002321560.2| pentatricopeptide repeat-containing family p...   120   2e-25
gb|EOY20582.1| Pentatricopeptide repeat (PPR) superfamily protei...   120   2e-25
gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isof...   120   2e-25
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   119   6e-25
ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containi...   117   2e-24
ref|XP_003601293.1| Pentatricopeptide repeat-containing protein,...   117   2e-24
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi...   116   3e-24
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi...   116   3e-24
ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi...   115   6e-24

>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 489

 Score =  137 bits (345), Expect = 1e-30
 Identities = 63/87 (72%), Positives = 75/87 (86%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+V AGKP+ AV+ FLSMH  GCPQDL+SFNT+LDVLCK++RVEKA +L KVFRGR
Sbjct: 139 IIAERYVAAGKPDRAVKVFLSMHEHGCPQDLNSFNTVLDVLCKAKRVEKAYNLFKVFRGR 198

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           FR D V+YN+I +GWC IKRTPKALEV
Sbjct: 199 FRADCVSYNVIVNGWCLIKRTPKALEV 225


>sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor gi|5882733|gb|AAD55286.1|AC008263_17 Contains
           a PF|01535 DUF17 domain [Arabidopsis thaliana]
           gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical
           protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  124 bits (311), Expect = 1e-26
 Identities = 58/87 (66%), Positives = 69/87 (79%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+  AGKP+ AV+ FL+MH  GC QDL+SFNT+LDVLCKS+RVEKA  L +  RGR
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 190

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F  D VTYN+I +GWC IKRTPKALEV
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKALEV 217


>ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis
           thaliana] gi|332197524|gb|AEE35645.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 453

 Score =  124 bits (311), Expect = 1e-26
 Identities = 58/87 (66%), Positives = 69/87 (79%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+  AGKP+ AV+ FL+MH  GC QDL+SFNT+LDVLCKS+RVEKA  L +  RGR
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 190

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F  D VTYN+I +GWC IKRTPKALEV
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKALEV 217


>ref|XP_006390373.1| hypothetical protein EUTSA_v10018527mg [Eutrema salsugineum]
           gi|557086807|gb|ESQ27659.1| hypothetical protein
           EUTSA_v10018527mg [Eutrema salsugineum]
          Length = 454

 Score =  124 bits (310), Expect = 2e-26
 Identities = 58/87 (66%), Positives = 68/87 (78%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+  AGKP+ AV  FL+MH  GC QDL+SFNT+LDVLCKS+RVEKA  L +  RGR
Sbjct: 132 IVAERYASAGKPDKAVNLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAHELFRALRGR 191

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F  D VTYN+I +GWC IKRTPKALEV
Sbjct: 192 FSVDTVTYNVIVNGWCLIKRTPKALEV 218


>ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333405|gb|EFH63823.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  124 bits (310), Expect = 2e-26
 Identities = 57/87 (65%), Positives = 69/87 (79%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+  +GKP+ AV+ FL+MH  GC QDL+SFNT+LDVLCKS+RVEKA  L +  RGR
Sbjct: 129 IVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 188

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F  D VTYN+I +GWC IKRTPKALEV
Sbjct: 189 FSADTVTYNVIVNGWCLIKRTPKALEV 215


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/88 (67%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKA-ASLLKVFRG 179
           I+ ER V AGKP+ A++ FLSM   GCPQDL SFNT+LD+LCKS+RVE A  +L KV RG
Sbjct: 152 IIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRG 211

Query: 180 RFRPDAVTYNIIADGWCRIKRTPKALEV 263
           +F+ D V+YNIIA+GWC IKRTPKALEV
Sbjct: 212 KFKADVVSYNIIANGWCLIKRTPKALEV 239


>dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
          Length = 447

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/87 (65%), Positives = 68/87 (78%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+  AGKP+ AV+ FL+MH  GC QDL+SFNT+LDVLCKS+RVEKA  L +  RGR
Sbjct: 125 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 184

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F  D VTYN+I +GWC IKRTPK LEV
Sbjct: 185 FSVDTVTYNVILNGWCLIKRTPKTLEV 211


>gb|ESW04378.1| hypothetical protein PHAVU_011G090300g [Phaseolus vulgaris]
          Length = 491

 Score =  122 bits (306), Expect = 5e-26
 Identities = 60/87 (68%), Positives = 70/87 (80%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           IL ER+   GKP   VRTFLSMH  GC QDL+SFNT+LDVLCKS+RVE A +LLK FR R
Sbjct: 140 ILGERYAANGKPHRTVRTFLSMHEHGCRQDLNSFNTVLDVLCKSKRVEMAHTLLKTFRSR 199

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           FR D+V+YNIIA+G+C IKRTP AL+V
Sbjct: 200 FRLDSVSYNIIANGYCLIKRTPMALQV 226


>ref|XP_006301673.1| hypothetical protein CARUB_v10022126mg [Capsella rubella]
           gi|482570383|gb|EOA34571.1| hypothetical protein
           CARUB_v10022126mg [Capsella rubella]
          Length = 451

 Score =  122 bits (306), Expect = 5e-26
 Identities = 57/87 (65%), Positives = 68/87 (78%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER   +GKP+ AV+ FL+MH  GC QDL+SFNT+LDVLCKS+RVEKA  L +  RGR
Sbjct: 129 IVAERFASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 188

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F  D VTYN+I +GWC IKRTPKALEV
Sbjct: 189 FGADTVTYNVIVNGWCLIKRTPKALEV 215


>ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568845657|ref|XP_006476684.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 493

 Score =  120 bits (302), Expect = 1e-25
 Identities = 54/87 (62%), Positives = 71/87 (81%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+V AGK + AV+ FLSMH  GC Q L+SFNT+LD+LCK ++VEKA +L KVFRG+
Sbjct: 143 IIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK 202

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F+ D ++YN+IA+GWC +KRT KALEV
Sbjct: 203 FKADVISYNVIANGWCLVKRTNKALEV 229


>ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citrus clementina]
           gi|557541992|gb|ESR52970.1| hypothetical protein
           CICLE_v10019863mg [Citrus clementina]
          Length = 493

 Score =  120 bits (302), Expect = 1e-25
 Identities = 54/87 (62%), Positives = 71/87 (81%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+V AGK + AV+ FLSMH  GC Q L+SFNT+LD+LCK ++VEKA +L KVFRG+
Sbjct: 143 IIAERYVSAGKADRAVKIFLSMHEHGCRQSLNSFNTILDLLCKEKKVEKAYNLFKVFRGK 202

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F+ D ++YN+IA+GWC +KRT KALEV
Sbjct: 203 FKADVISYNVIANGWCLVKRTNKALEV 229


>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550322291|gb|EEF05687.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 491

 Score =  120 bits (301), Expect = 2e-25
 Identities = 56/87 (64%), Positives = 69/87 (79%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+  AGKP  AV+ FLSMH  GC QDL SFNT+LDVLCKS+RVE A +L KVF+G+
Sbjct: 141 IIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGK 200

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           FR D V+YN++ +GWC IKRT KALE+
Sbjct: 201 FRADCVSYNVMVNGWCLIKRTNKALEM 227


>gb|EOY20582.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
           [Theobroma cacao] gi|508773327|gb|EOY20583.1|
           Pentatricopeptide repeat (PPR) superfamily protein
           isoform 2 [Theobroma cacao]
          Length = 413

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/86 (63%), Positives = 69/86 (80%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+V AGKP+ A++ FLSMH  GC QDL SFNT+LDVLCK++RVEKA +  KV RG+
Sbjct: 141 IIAERYVAAGKPDKALKIFLSMHEHGCFQDLHSFNTILDVLCKAKRVEKACNFFKVLRGK 200

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALE 260
           F+ D ++YNIIA+GWC IKRT  ALE
Sbjct: 201 FKADVISYNIIANGWCLIKRTNMALE 226


>gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508773328|gb|EOY20584.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 491

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/86 (63%), Positives = 69/86 (80%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+V AGKP+ A++ FLSMH  GC QDL SFNT+LDVLCK++RVEKA +  KV RG+
Sbjct: 141 IIAERYVAAGKPDKALKIFLSMHEHGCFQDLHSFNTILDVLCKAKRVEKACNFFKVLRGK 200

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALE 260
           F+ D ++YNIIA+GWC IKRT  ALE
Sbjct: 201 FKADVISYNIIANGWCLIKRTNMALE 226


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  119 bits (297), Expect = 6e-25
 Identities = 55/87 (63%), Positives = 67/87 (77%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+   GKP  AV  F+SMH  GC QDLSSFNT+LDVLCKS+RVE A +L K  +G+
Sbjct: 132 IIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGK 191

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F+ D V+YNII +GWC IKRTPKALE+
Sbjct: 192 FKADCVSYNIIVNGWCLIKRTPKALEM 218


>ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cicer arietinum]
          Length = 498

 Score =  117 bits (292), Expect = 2e-24
 Identities = 54/87 (62%), Positives = 69/87 (79%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           IL ER+   GK   AV+ FLSMH  GC QDL+SFNT+LDVLCK++RVE A +L K F+GR
Sbjct: 148 ILSERYATGGKAHRAVKVFLSMHEHGCNQDLNSFNTILDVLCKTKRVEMAHNLFKTFKGR 207

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F+ D+V+YNI+A+GWC +KRTP AL+V
Sbjct: 208 FKCDSVSYNIMANGWCLMKRTPMALQV 234


>ref|XP_003601293.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355490341|gb|AES71544.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 317

 Score =  117 bits (292), Expect = 2e-24
 Identities = 55/87 (63%), Positives = 68/87 (78%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           IL ER+   GK   AV+ FLSMH  GC QDL+SFNT+LDVLCK++RVE A +L K  RGR
Sbjct: 140 ILAERYATGGKAHKAVKVFLSMHEHGCHQDLNSFNTILDVLCKTKRVEMANNLFKTLRGR 199

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F+ D+V+YNI+A+GWC IKRTP AL+V
Sbjct: 200 FKCDSVSYNIMANGWCLIKRTPMALQV 226


>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Solanum lycopersicum]
          Length = 492

 Score =  116 bits (291), Expect = 3e-24
 Identities = 53/87 (60%), Positives = 66/87 (75%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+V AGK + AV  FLSMH  GCPQDLSSFN  LDVLCKS+R E A  L K+FR R
Sbjct: 142 IITERYVSAGKADKAVNVFLSMHKHGCPQDLSSFNAFLDVLCKSKRAEMALKLFKMFRSR 201

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F+ D ++YN +A+G+C +KRTPKA E+
Sbjct: 202 FKADTISYNTLANGFCLVKRTPKAQEI 228


>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 495

 Score =  116 bits (291), Expect = 3e-24
 Identities = 59/87 (67%), Positives = 65/87 (74%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           IL ER+   GKP  AVRTFLSM   G  QDL SFNTLLD+LCKS+RVE A SLLK    R
Sbjct: 144 ILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR 203

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           FRPD VTYNI+A+G+C IKRTP AL V
Sbjct: 204 FRPDTVTYNILANGYCLIKRTPMALRV 230


>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565356286|ref|XP_006344999.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565356288|ref|XP_006345000.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 486

 Score =  115 bits (288), Expect = 6e-24
 Identities = 52/87 (59%), Positives = 66/87 (75%)
 Frame = +3

Query: 3   ILFERHVGAGKPELAVRTFLSMHHQGCPQDLSSFNTLLDVLCKSRRVEKAASLLKVFRGR 182
           I+ ER+V AGK + AV  FLSMH  GCPQDL+SFN  LDVLCKS+R E A  L K+FR R
Sbjct: 136 IITERYVSAGKADKAVNVFLSMHKHGCPQDLNSFNAFLDVLCKSKRAEMALKLFKMFRSR 195

Query: 183 FRPDAVTYNIIADGWCRIKRTPKALEV 263
           F+ D ++YN +A+G+C +KRTPKA E+
Sbjct: 196 FKADTISYNTLANGFCLVKRTPKAQEI 222