BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00051699
         (323 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ16871.1| hypothetical protein PRUPE_ppa003913mg [Prunus pe...    82   7e-14
emb|CBI27814.3| unnamed protein product [Vitis vinifera]               74   3e-11
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_002534373.1| pentatricopeptide repeat-containing protein,...    72   1e-10
ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat...    64   3e-08
ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07

>gb|EMJ16871.1| hypothetical protein PRUPE_ppa003913mg [Prunus persica]
          Length = 540

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
 Frame = -2

Query: 262 FLHSVSSLSALKCLHAVLLKQGG-LFLHVATKXXXXXXXXXXSVRYARNLFDAAPRRDSF 86
           F +S SS S LKC+HA++ + G    L ++TK          ++ YAR LFD  P+RD+F
Sbjct: 36  FFNSCSSFSDLKCIHALIFQHGSNQNLLLSTKLVTLASSMAPTMDYARKLFDTMPKRDAF 95

Query: 85  MWNTLLRAYADLGPCNEVPFLYAQMH 8
           +WNTL+R YAD GPC+E   LY  MH
Sbjct: 96  LWNTLIRGYADRGPCHEAIVLYRNMH 121


>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 LHSVSSLSALKCLHAVLLKQG-GLFLHVATKXXXXXXXXXXSVRYARNLFDAAPRRDSFM 83
           L+  SSL  L  +HA+++  G G  L ++TK          ++ YAR +FD  P+RD F+
Sbjct: 36  LNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFL 95

Query: 82  WNTLLRAYADLGPCNEVPFLYAQMHAA 2
           WNTL+R YAD GPC E   LY+ MH A
Sbjct: 96  WNTLIRGYADAGPCEEALALYSNMHGA 122


>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 LHSVSSLSALKCLHAVLLKQG-GLFLHVATKXXXXXXXXXXSVRYARNLFDAAPRRDSFM 83
           L+  SSL  L  +HA+++  G G  L ++TK          ++ YAR +FD  P+RD F+
Sbjct: 36  LNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFL 95

Query: 82  WNTLLRAYADLGPCNEVPFLYAQMHAA 2
           WNTL+R YAD GPC E   LY+ MH A
Sbjct: 96  WNTLIRGYADAGPCEEALALYSNMHGA 122


>ref|XP_006338058.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 608

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = -2

Query: 259 LHSVSSLSALKCLHAVLLKQG-GLFLHVATKXXXXXXXXXXSVRYARNLFDAAPRRDSFM 83
           L S  SL ALK LH ++L  G    L + TK          ++ YAR LFD  P+RD F 
Sbjct: 40  LSSCHSLPALKQLHTLVLTTGYHKNLLICTKIVSLGCFLSPTMDYARKLFDQMPQRDVFA 99

Query: 82  WNTLLRAYADLGPCNEVPFLYAQMH 8
           WNTL+R Y++LGPC E  FLY +MH
Sbjct: 100 WNTLIRGYSNLGPCQESIFLYKEMH 124


>ref|XP_002534373.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525413|gb|EEF28011.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 207

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = -2

Query: 259 LHSVSSLSALKCLHAVLLKQG-GLFLHVATKXXXXXXXXXXSVRYARNLFDAAPRRDSFM 83
           L+S SSLS LK  HA+ +  G    L ++TK          S+ YAR LFD  P+RD F+
Sbjct: 33  LNSCSSLSHLKLTHALTITTGFHNSLLLSTKLITSASALSSSMDYARKLFDKMPQRDVFL 92

Query: 82  WNTLLRAYADLGPCNEVPFLYAQMH 8
           WNTL+R YADLGP  E   LY  MH
Sbjct: 93  WNTLIRGYADLGPYQEAVMLYKTMH 117


>ref|XP_004305327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Fragaria vesca subsp. vesca]
          Length = 518

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = -2

Query: 130 YARNLFDAAPRRDSFMWNTLLRAYADLGPCNEVPFLYAQMH 8
           Y RN+FDA   RD F+WNTL+R YAD GPC+E  FLY +MH
Sbjct: 3   YPRNMFDAMSERDVFLWNTLIRGYADRGPCHEAIFLYRKMH 43


>ref|XP_004238540.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 617

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -2

Query: 130 YARNLFDAAPRRDSFMWNTLLRAYADLGPCNEVPFLYAQMH 8
           YAR LFD  P+RD F WNTL+R Y++LGPC E  FLY ++H
Sbjct: 3   YARKLFDQMPQRDVFAWNTLIRGYSNLGPCQESIFLYKELH 43