BLASTX nr result
ID: Zingiber24_contig00051511
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00051511
(359 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW58820.1| hypothetical protein ZEAMMB73_649074, partial [Ze... 122 5e-26
ref|XP_002448151.1| hypothetical protein SORBIDRAFT_06g022200 [S... 121 8e-26
ref|XP_004976179.1| PREDICTED: endoribonuclease Dicer homolog 4-... 121 1e-25
dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group] 121 1e-25
sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homo... 121 1e-25
emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group] gi... 121 1e-25
ref|XP_006653591.1| PREDICTED: endoribonuclease Dicer homolog 4-... 120 2e-25
ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-... 120 2e-25
ref|XP_004978957.1| PREDICTED: endoribonuclease Dicer homolog 4-... 119 3e-25
ref|XP_004978956.1| PREDICTED: endoribonuclease Dicer homolog 4-... 119 3e-25
gb|EXB82158.1| Dicer-like protein 4 [Morus notabilis] 118 9e-25
ref|XP_006473960.1| PREDICTED: dicer-like protein 4-like isoform... 118 9e-25
ref|XP_006473959.1| PREDICTED: dicer-like protein 4-like isoform... 118 9e-25
ref|XP_006473958.1| PREDICTED: dicer-like protein 4-like isoform... 118 9e-25
ref|XP_006473957.1| PREDICTED: dicer-like protein 4-like isoform... 118 9e-25
ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinif... 118 9e-25
emb|CBI25610.3| unnamed protein product [Vitis vinifera] 118 9e-25
gb|EMT06390.1| Endoribonuclease Dicer-4-like protein [Aegilops t... 117 1e-24
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis... 117 1e-24
gb|EMJ05998.1| hypothetical protein PRUPE_ppa000144mg [Prunus pe... 117 2e-24
>gb|AFW58820.1| hypothetical protein ZEAMMB73_649074, partial [Zea mays]
Length = 237
Score = 122 bits (306), Expect = 5e-26
Identities = 58/69 (84%), Positives = 63/69 (91%)
Frame = +3
Query: 153 SSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLIRKPS 332
S A S KDPRTIARKYQL+LCK+AV+ENIIVYLGTGCGKTHIAVLLMYELGHLIRKPS
Sbjct: 11 SGAAASEPKDPRTIARKYQLDLCKRAVDENIIVYLGTGCGKTHIAVLLMYELGHLIRKPS 70
Query: 333 KRVCIFLAP 359
+ VC+FLAP
Sbjct: 71 REVCVFLAP 79
>ref|XP_002448151.1| hypothetical protein SORBIDRAFT_06g022200 [Sorghum bicolor]
gi|241939334|gb|EES12479.1| hypothetical protein
SORBIDRAFT_06g022200 [Sorghum bicolor]
Length = 194
Score = 121 bits (304), Expect = 8e-26
Identities = 60/74 (81%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Frame = +3
Query: 141 SGGESSLAPSGI-KDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHL 317
+G SS A +G KDPR IARKYQL+LCK+AVEENI+VYLGTGCGKTHIAVLLMYELGHL
Sbjct: 8 AGSSSSGAAAGEPKDPRRIARKYQLDLCKRAVEENIVVYLGTGCGKTHIAVLLMYELGHL 67
Query: 318 IRKPSKRVCIFLAP 359
IRKPS+ VCIFLAP
Sbjct: 68 IRKPSREVCIFLAP 81
>ref|XP_004976179.1| PREDICTED: endoribonuclease Dicer homolog 4-like isoform X1
[Setaria italica]
Length = 1632
Score = 121 bits (303), Expect = 1e-25
Identities = 58/73 (79%), Positives = 63/73 (86%)
Frame = +3
Query: 141 SGGESSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLI 320
S +S A G KDPR IARKYQL+LCK+AVEENIIVYLGTGCGKTHIAVLLM ELGHLI
Sbjct: 11 SAAAASAAAGGPKDPRNIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLMNELGHLI 70
Query: 321 RKPSKRVCIFLAP 359
RKPS+ VC+FLAP
Sbjct: 71 RKPSREVCVFLAP 83
>dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
Length = 1631
Score = 121 bits (303), Expect = 1e-25
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = +3
Query: 129 PSLMSGGESSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYEL 308
P+ + G SS KDPRTIARKYQL+LCK+AVEENIIVYLGTGCGKTHIAVLL+YEL
Sbjct: 9 PAAAAAGPSSTRGEP-KDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYEL 67
Query: 309 GHLIRKPSKRVCIFLAP 359
GHLIRKPS+ VCIFLAP
Sbjct: 68 GHLIRKPSREVCIFLAP 84
>sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
Full=Dicer-like protein 4; Short=OsDCL4; AltName:
Full=Protein SHOOT ORGANIZATION 1
gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza
sativa Japonica Group]
Length = 1657
Score = 121 bits (303), Expect = 1e-25
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = +3
Query: 129 PSLMSGGESSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYEL 308
P+ + G SS KDPRTIARKYQL+LCK+AVEENIIVYLGTGCGKTHIAVLL+YEL
Sbjct: 9 PAAAAAGPSSTRGEP-KDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYEL 67
Query: 309 GHLIRKPSKRVCIFLAP 359
GHLIRKPS+ VCIFLAP
Sbjct: 68 GHLIRKPSREVCIFLAP 84
>emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2
[Oryza sativa Indica Group]
Length = 1604
Score = 121 bits (303), Expect = 1e-25
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = +3
Query: 129 PSLMSGGESSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYEL 308
P+ + G SS KDPRTIARKYQL+LCK+AVEENIIVYLGTGCGKTHIAVLL+YEL
Sbjct: 9 PAAAAAGPSSTRGEP-KDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYEL 67
Query: 309 GHLIRKPSKRVCIFLAP 359
GHLIRKPS+ VCIFLAP
Sbjct: 68 GHLIRKPSREVCIFLAP 84
>ref|XP_006653591.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Oryza
brachyantha]
Length = 1633
Score = 120 bits (301), Expect = 2e-25
Identities = 56/61 (91%), Positives = 60/61 (98%)
Frame = +3
Query: 177 KDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLIRKPSKRVCIFLA 356
KDPRTIARKYQL+LCK+AVEENIIVYLGTGCGKTHIAVLL+YELGHLIRKPS+ VCIFLA
Sbjct: 21 KDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPSREVCIFLA 80
Query: 357 P 359
P
Sbjct: 81 P 81
>ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Brachypodium
distachyon]
Length = 1627
Score = 120 bits (300), Expect = 2e-25
Identities = 59/74 (79%), Positives = 65/74 (87%), Gaps = 3/74 (4%)
Frame = +3
Query: 147 GESSLAPSGI---KDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHL 317
GE+S A + KDPRTIARKYQL+LCK+AVEENI+VYLGTGCGKTHIAVLL+YELGHL
Sbjct: 2 GETSAAAASTEEPKDPRTIARKYQLDLCKRAVEENIVVYLGTGCGKTHIAVLLIYELGHL 61
Query: 318 IRKPSKRVCIFLAP 359
IRKPS VCIFLAP
Sbjct: 62 IRKPSSDVCIFLAP 75
>ref|XP_004978957.1| PREDICTED: endoribonuclease Dicer homolog 4-like isoform X2
[Setaria italica]
Length = 133
Score = 119 bits (299), Expect = 3e-25
Identities = 58/73 (79%), Positives = 62/73 (84%)
Frame = +3
Query: 141 SGGESSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLI 320
S +S A G KDPR IARKYQL+LCK+AVEENIIVYLGTGCGKTHIAVLLM ELGHLI
Sbjct: 11 SAAAASAAAGGPKDPRKIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLMNELGHLI 70
Query: 321 RKPSKRVCIFLAP 359
RKPS VC+FLAP
Sbjct: 71 RKPSHEVCVFLAP 83
>ref|XP_004978956.1| PREDICTED: endoribonuclease Dicer homolog 4-like isoform X1
[Setaria italica]
Length = 181
Score = 119 bits (299), Expect = 3e-25
Identities = 58/73 (79%), Positives = 62/73 (84%)
Frame = +3
Query: 141 SGGESSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLI 320
S +S A G KDPR IARKYQL+LCK+AVEENIIVYLGTGCGKTHIAVLLM ELGHLI
Sbjct: 11 SAAAASAAAGGPKDPRKIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAVLLMNELGHLI 70
Query: 321 RKPSKRVCIFLAP 359
RKPS VC+FLAP
Sbjct: 71 RKPSHEVCVFLAP 83
>gb|EXB82158.1| Dicer-like protein 4 [Morus notabilis]
Length = 313
Score = 118 bits (295), Expect = 9e-25
Identities = 58/81 (71%), Positives = 66/81 (81%), Gaps = 7/81 (8%)
Frame = +3
Query: 138 MSGGESSLAPSGI-------KDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLL 296
MS GE+ A SG KDPR IARKYQLELCKKA+EENIIVYLGTGCGKTHIAVLL
Sbjct: 1 MSDGEADPANSGASSSSFPEKDPRKIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLL 60
Query: 297 MYELGHLIRKPSKRVCIFLAP 359
+YELGHLI++P + +C+FLAP
Sbjct: 61 IYELGHLIKRPQENICVFLAP 81
>ref|XP_006473960.1| PREDICTED: dicer-like protein 4-like isoform X4 [Citrus sinensis]
Length = 1273
Score = 118 bits (295), Expect = 9e-25
Identities = 59/73 (80%), Positives = 63/73 (86%), Gaps = 1/73 (1%)
Frame = +3
Query: 144 GGESSL-APSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLI 320
G ESSL A KDP+ IARKYQLELCKKA+EENIIVYLGTGCGKTHIAVLL+YEL HLI
Sbjct: 41 GAESSLGAQKTDKDPKKIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
Query: 321 RKPSKRVCIFLAP 359
RKP K +CIFLAP
Sbjct: 101 RKPQKSICIFLAP 113
>ref|XP_006473959.1| PREDICTED: dicer-like protein 4-like isoform X3 [Citrus sinensis]
Length = 1605
Score = 118 bits (295), Expect = 9e-25
Identities = 59/73 (80%), Positives = 63/73 (86%), Gaps = 1/73 (1%)
Frame = +3
Query: 144 GGESSL-APSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLI 320
G ESSL A KDP+ IARKYQLELCKKA+EENIIVYLGTGCGKTHIAVLL+YEL HLI
Sbjct: 41 GAESSLGAQKTDKDPKKIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
Query: 321 RKPSKRVCIFLAP 359
RKP K +CIFLAP
Sbjct: 101 RKPQKSICIFLAP 113
>ref|XP_006473958.1| PREDICTED: dicer-like protein 4-like isoform X2 [Citrus sinensis]
Length = 1651
Score = 118 bits (295), Expect = 9e-25
Identities = 59/73 (80%), Positives = 63/73 (86%), Gaps = 1/73 (1%)
Frame = +3
Query: 144 GGESSL-APSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLI 320
G ESSL A KDP+ IARKYQLELCKKA+EENIIVYLGTGCGKTHIAVLL+YEL HLI
Sbjct: 41 GAESSLGAQKTDKDPKKIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
Query: 321 RKPSKRVCIFLAP 359
RKP K +CIFLAP
Sbjct: 101 RKPQKSICIFLAP 113
>ref|XP_006473957.1| PREDICTED: dicer-like protein 4-like isoform X1 [Citrus sinensis]
Length = 1652
Score = 118 bits (295), Expect = 9e-25
Identities = 59/73 (80%), Positives = 63/73 (86%), Gaps = 1/73 (1%)
Frame = +3
Query: 144 GGESSL-APSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLI 320
G ESSL A KDP+ IARKYQLELCKKA+EENIIVYLGTGCGKTHIAVLL+YEL HLI
Sbjct: 41 GAESSLGAQKTDKDPKKIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLIYELAHLI 100
Query: 321 RKPSKRVCIFLAP 359
RKP K +CIFLAP
Sbjct: 101 RKPQKSICIFLAP 113
>ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 118 bits (295), Expect = 9e-25
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +3
Query: 147 GESSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLIRK 326
G SS A S KDPRTIAR YQLELCKKA+EENIIVY+GTGCGKTHIAVLL++ LGHLIRK
Sbjct: 31 GSSSGASSSKKDPRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRK 90
Query: 327 PSKRVCIFLAP 359
P K +C+FLAP
Sbjct: 91 PQKNICVFLAP 101
>emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 118 bits (295), Expect = 9e-25
Identities = 56/71 (78%), Positives = 62/71 (87%)
Frame = +3
Query: 147 GESSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLIRK 326
G SS A S KDPRTIAR YQLELCKKA+EENIIVY+GTGCGKTHIAVLL++ LGHLIRK
Sbjct: 31 GSSSGASSSKKDPRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRK 90
Query: 327 PSKRVCIFLAP 359
P K +C+FLAP
Sbjct: 91 PQKNICVFLAP 101
>gb|EMT06390.1| Endoribonuclease Dicer-4-like protein [Aegilops tauschii]
Length = 189
Score = 117 bits (294), Expect = 1e-24
Identities = 58/73 (79%), Positives = 63/73 (86%)
Frame = +3
Query: 141 SGGESSLAPSGIKDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLI 320
S GE P KDPRTIARKYQL+LCK+A+EENIIVYLGTGCGKTHIAVLL+YELGHLI
Sbjct: 10 SAGEREPQP---KDPRTIARKYQLDLCKRALEENIIVYLGTGCGKTHIAVLLIYELGHLI 66
Query: 321 RKPSKRVCIFLAP 359
RKP + VCIFLAP
Sbjct: 67 RKPRRDVCIFLAP 79
>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
[Ricinus communis]
Length = 1633
Score = 117 bits (294), Expect = 1e-24
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3
Query: 177 KDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMYELGHLIRKPSKRVCIFLA 356
KDPR IARKYQLELCKKA+EENIIVYLGTGCGKTHIAVLL+YELGHLIRKP K VC+FLA
Sbjct: 40 KDPRKIARKYQLELCKKALEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPLKNVCVFLA 99
Query: 357 P 359
P
Sbjct: 100 P 100
>gb|EMJ05998.1| hypothetical protein PRUPE_ppa000144mg [Prunus persica]
Length = 1639
Score = 117 bits (292), Expect = 2e-24
Identities = 58/79 (73%), Positives = 63/79 (79%), Gaps = 6/79 (7%)
Frame = +3
Query: 141 SGGESSLAPSGI------KDPRTIARKYQLELCKKAVEENIIVYLGTGCGKTHIAVLLMY 302
SG + L SG KDPR +ARKYQLELCK+A+EENIIVYLGTGCGKTHIAVLL+Y
Sbjct: 17 SGADDVLVESGAGALKSDKDPRKVARKYQLELCKRALEENIIVYLGTGCGKTHIAVLLIY 76
Query: 303 ELGHLIRKPSKRVCIFLAP 359
ELGHLIRKP K CIFLAP
Sbjct: 77 ELGHLIRKPEKNKCIFLAP 95