BLASTX nr result
ID: Zingiber24_contig00051475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00051475
(262 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004984117.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|NP_001050297.1| Os03g0396200 [Oryza sativa Japonica Group] g... 97 3e-18
gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonic... 97 3e-18
gb|AAK52558.1|AC079853_11 Putative selenium-binding protein-like... 97 3e-18
gb|EEC75413.1| hypothetical protein OsI_11913 [Oryza sativa Indi... 96 5e-18
ref|XP_006651472.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
gb|EMT28927.1| hypothetical protein F775_10857 [Aegilops tauschii] 94 2e-17
gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily p... 92 9e-17
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi... 90 3e-16
ref|XP_002300569.2| hypothetical protein POPTR_0001s47030g, part... 90 4e-16
gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus... 89 6e-16
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_003624942.1| Pentatricopeptide repeat-containing protein ... 88 1e-15
gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula] 88 1e-15
ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006423015.1| hypothetical protein CICLE_v10027922mg [Citr... 87 3e-15
ref|XP_006487111.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
>ref|XP_004984117.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Setaria italica]
Length = 774
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
LF RM+ LGL D VT++S+LP+C L + L +HVY +KHG+D +LFV NALID+Y
Sbjct: 183 LFGRMVGLGLDGDAVTLSSVLPMCVLLGDRALALVMHVYAVKHGLDGELFVCNALIDVYG 242
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG LEEAQ VF GM RDLVT
Sbjct: 243 KLGMLEEAQWVFDGMALRDLVT 264
>ref|NP_001050297.1| Os03g0396200 [Oryza sativa Japonica Group]
gi|113548768|dbj|BAF12211.1| Os03g0396200 [Oryza sativa
Japonica Group]
Length = 435
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
LF RM+M G+ D VTV+S+LP+C L + L +H+Y +KHG+D +LFV NA+ID+Y
Sbjct: 135 LFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYG 194
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG LEE +KVF GM RDLVT
Sbjct: 195 KLGMLEEVRKVFDGMSSRDLVT 216
>gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein
OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
LF RM+M G+ D VTV+S+LP+C L + L +H+Y +KHG+D +LFV NA+ID+Y
Sbjct: 157 LFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYG 216
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG LEE +KVF GM RDLVT
Sbjct: 217 KLGMLEEVRKVFDGMSSRDLVT 238
>gb|AAK52558.1|AC079853_11 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
Length = 457
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
LF RM+M G+ D VTV+S+LP+C L + L +H+Y +KHG+D +LFV NA+ID+Y
Sbjct: 157 LFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYG 216
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG LEE +KVF GM RDLVT
Sbjct: 217 KLGMLEEVRKVFDGMSSRDLVT 238
>gb|EEC75413.1| hypothetical protein OsI_11913 [Oryza sativa Indica Group]
Length = 597
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
LF RM+ G+ D VTV+S+LP+C L + L +H+Y +KHG+D +LFV NA+ID+Y
Sbjct: 157 LFGRMVTEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYG 216
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG LEEA+KVF GM RDLVT
Sbjct: 217 KLGMLEEARKVFDGMSSRDLVT 238
>ref|XP_006651472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Oryza brachyantha]
Length = 749
Score = 95.1 bits (235), Expect = 9e-18
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
LF RM+ G+ D VTV+S+LP+C L + L +H+Y +KHG+D +LFV NA+ID+Y
Sbjct: 158 LFGRMVGEGVAGDAVTVSSVLPMCALLGDRALALVMHLYAVKHGLDDELFVCNAMIDVYG 217
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG LEEA+KVF GM RDLVT
Sbjct: 218 KLGILEEARKVFDGMTSRDLVT 239
>ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 95.1 bits (235), Expect = 9e-18
Identities = 48/82 (58%), Positives = 60/82 (73%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
LF RM+ G+ D VTV+S+LP+C L + +L +HVY +KHG+D +LFV NALID+Y
Sbjct: 156 LFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYG 215
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG LEEAQ VF GM RDLVT
Sbjct: 216 KLGMLEEAQCVFHGMECRDLVT 237
>gb|EMT28927.1| hypothetical protein F775_10857 [Aegilops tauschii]
Length = 746
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
LF RM G+ D VTV+S+LP+C L + +L +HVY +KHG+D +LFV NA++D+Y
Sbjct: 153 LFRRMAGEGVAGDAVTVSSVLPMCALLGDWVLALVMHVYAVKHGLDKELFVCNAMVDVYG 212
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG LEEA++VF GM RDLVT
Sbjct: 213 KLGMLEEARRVFDGMERRDLVT 234
>gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 820
Score = 91.7 bits (226), Expect = 9e-17
Identities = 47/83 (56%), Positives = 58/83 (69%)
Frame = -3
Query: 251 ELFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMY 72
E+ M + + MD VT+ SILP+C L + L G IH+Y IK G++ DLFVSNALI+MY
Sbjct: 230 EVLNEMRLERVMMDPVTIASILPICAQLDDILYGRLIHLYAIKSGLEFDLFVSNALINMY 289
Query: 71 AKLGHLEEAQKVFKGMVDRDLVT 3
AK G LE AQKVF MV RDLV+
Sbjct: 290 AKFGKLEHAQKVFDHMVVRDLVS 312
>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Glycine max]
gi|571544149|ref|XP_006602168.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Glycine max]
gi|571544153|ref|XP_006602169.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Glycine max]
gi|571544157|ref|XP_006602170.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Glycine max]
gi|571544163|ref|XP_006602171.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X5 [Glycine max]
Length = 824
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
+ +RM + MD VTV+S+LP+C + + G +H+Y IKHG++SD+FVSNALI+MY+
Sbjct: 235 VLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYS 294
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
K G L++AQ+VF GM RDLV+
Sbjct: 295 KFGRLQDAQRVFDGMEVRDLVS 316
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/82 (30%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = -3
Query: 245 FERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIK-HGMDSDLFVSNALIDMYA 69
F+ M+ +G+ D +TV S+ + L + +G +H + ++ ++ D+ + NAL++MYA
Sbjct: 337 FKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYA 396
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG ++ A+ VF+ + RD+++
Sbjct: 397 KLGSIDCARAVFEQLPSRDVIS 418
>ref|XP_002300569.2| hypothetical protein POPTR_0001s47030g, partial [Populus
trichocarpa] gi|550350056|gb|EEE85374.2| hypothetical
protein POPTR_0001s47030g, partial [Populus trichocarpa]
Length = 751
Score = 89.7 bits (221), Expect = 4e-16
Identities = 44/83 (53%), Positives = 60/83 (72%)
Frame = -3
Query: 251 ELFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMY 72
++ + M + G+ MD +TV S+LPVC + + L G IH+Y IKHG++ +LFVSNALI+MY
Sbjct: 185 DIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMY 244
Query: 71 AKLGHLEEAQKVFKGMVDRDLVT 3
AK G L AQKVF MV RD+V+
Sbjct: 245 AKFGSLGHAQKVFGQMVVRDIVS 267
>gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus vulgaris]
Length = 816
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/79 (50%), Positives = 59/79 (74%)
Frame = -3
Query: 239 RMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYAKLG 60
RM + G+ MD VTV S+LPVC + + + G +H+Y IK G++SD+FV NALI++Y+K G
Sbjct: 230 RMKVEGVKMDTVTVASVLPVCAQVNDVVCGMLVHLYVIKQGLESDVFVCNALINLYSKFG 289
Query: 59 HLEEAQKVFKGMVDRDLVT 3
L++AQ+VF GM RD+V+
Sbjct: 290 RLQDAQRVFDGMKVRDVVS 308
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/82 (32%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = -3
Query: 245 FERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHG-MDSDLFVSNALIDMYA 69
F+RM +G+ D +TV S+ + L + +G +H + ++ G ++ D+ + NAL++MYA
Sbjct: 329 FKRMQFVGMGPDLLTVVSLTSIFVQLSDRRIGRAVHGFVMRRGWLEEDVVIGNALVNMYA 388
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
KLG ++ A+ VF+ + RD+++
Sbjct: 389 KLGLIDCARAVFEQLPRRDVIS 410
>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/83 (53%), Positives = 60/83 (72%)
Frame = -3
Query: 251 ELFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMY 72
++ + M + G+ MD VTV SILPVC L + IH+Y IKHG++ +LFVSNALI+MY
Sbjct: 259 DVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMY 318
Query: 71 AKLGHLEEAQKVFKGMVDRDLVT 3
AK G+L +AQKVF+ M RD+V+
Sbjct: 319 AKFGNLGDAQKVFQQMFLRDVVS 341
>ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
+ RM G+ MD +TV SILPVC + + G IH++ +KHG+DSD+FVSNALI+MY+
Sbjct: 209 VLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYS 268
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
K G L++AQ VF M RDLV+
Sbjct: 269 KFGRLQDAQMVFDQMEVRDLVS 290
>gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
+ RM G+ MD +TV SILPVC + + G IH++ +KHG+DSD+FVSNALI+MY+
Sbjct: 209 VLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYS 268
Query: 68 KLGHLEEAQKVFKGMVDRDLVT 3
K G L++AQ VF M RDLV+
Sbjct: 269 KFGRLQDAQMVFDQMEVRDLVS 290
>ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Solanum lycopersicum]
Length = 911
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/83 (53%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
L + M + G+ MD VT+ +LP C L + + G IH+Y IKHG++ D+FVSNALI+MYA
Sbjct: 321 LLDEMRLEGIKMDTVTIAVVLPTCAQLGDVVHGMSIHLYVIKHGLELDVFVSNALINMYA 380
Query: 68 KLGHLEEAQKVFKG-MVDRDLVT 3
+ G L AQKVF G MV RDLV+
Sbjct: 381 RFGELSYAQKVFDGMMVVRDLVS 403
>ref|XP_006423015.1| hypothetical protein CICLE_v10027922mg [Citrus clementina]
gi|557524949|gb|ESR36255.1| hypothetical protein
CICLE_v10027922mg [Citrus clementina]
Length = 705
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = -3
Query: 251 ELFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMY 72
++ + M + G+ MD +TV SILPVC N L G IH+Y +KHG++ +LFVSN LI+MY
Sbjct: 115 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 174
Query: 71 AKLGHLEEAQKVFKGMVDRDLVT 3
AK G + A +VF M++RD+V+
Sbjct: 175 AKFGMMRHALRVFDQMMERDVVS 197
>ref|XP_006487111.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Citrus sinensis]
Length = 820
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = -3
Query: 251 ELFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMY 72
++ + M + G+ MD +TV SILPVC N L G IH+Y IKHG++ +LFVSN LI+MY
Sbjct: 230 DILDEMRLEGVSMDPITVASILPVCAQSDNILSGLLIHLYIIKHGLEVNLFVSNNLINMY 289
Query: 71 AKLGHLEEAQKVFKGMVDRDLVT 3
K G + A +VF M++RD+V+
Sbjct: 290 TKFGMIRHALRVFDQMMERDVVS 312
>ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Solanum tuberosum]
gi|565353132|ref|XP_006343489.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Solanum tuberosum]
gi|565353134|ref|XP_006343490.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Solanum tuberosum]
gi|565353136|ref|XP_006343491.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Solanum tuberosum]
Length = 831
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = -3
Query: 248 LFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMYA 69
L + M + G+ MD VT+ +LP+C L + + G IH+Y IKHG++ D+FVSNALI+MYA
Sbjct: 241 LLDEMRLEGIKMDTVTIAVVLPICAQLGDIVHGLPIHLYVIKHGLELDVFVSNALINMYA 300
Query: 68 KLGHLEEAQKVFKG-MVDRDLVT 3
+ G L AQKVF MV RDLV+
Sbjct: 301 RFGELRHAQKVFDDMMVVRDLVS 323
>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/83 (48%), Positives = 56/83 (67%)
Frame = -3
Query: 251 ELFERMMMLGLPMDKVTVTSILPVCTPLQNPLLGFCIHVYCIKHGMDSDLFVSNALIDMY 72
E+F+ M + MD VT++S+LP+C L + + G IHVY IK G++ DLFV NALI+MY
Sbjct: 226 EVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMY 285
Query: 71 AKLGHLEEAQKVFKGMVDRDLVT 3
AK G L A+ +F M RD+V+
Sbjct: 286 AKFGELRSAETIFNQMKVRDIVS 308