BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00051460
         (388 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ28505.1| hypothetical protein PRUPE_ppa016683mg [Prunus pe...    70   2e-10
ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...    70   4e-10
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...    69   6e-10
gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thal...    69   8e-10
ref|XP_004292714.1| PREDICTED: pentatricopeptide repeat-containi...    69   8e-10
ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar...    69   8e-10
ref|XP_006472819.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_006434253.1| hypothetical protein CICLE_v10003743mg [Citr...    68   1e-09
gb|EXB60117.1| hypothetical protein L484_013382 [Morus notabilis]      67   2e-09
ref|XP_006604178.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
gb|ESW33688.1| hypothetical protein PHAVU_001G090600g [Phaseolus...    66   4e-09
gb|EOY16374.1| Pentatricopeptide repeat (PPR) superfamily protei...    65   7e-09
ref|XP_006302269.1| hypothetical protein CARUB_v10020312mg [Caps...    65   7e-09
ref|XP_006390093.1| hypothetical protein EUTSA_v10019853mg [Eutr...    64   2e-08
ref|XP_004512781.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
gb|EOY16373.1| Pentatricopeptide repeat superfamily protein isof...    64   3e-08
ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
emb|CBI15606.3| unnamed protein product [Vitis vinifera]               64   3e-08
ref|XP_006351204.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_004244895.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07

>gb|EMJ28505.1| hypothetical protein PRUPE_ppa016683mg [Prunus persica]
          Length = 449

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQG-LDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           L E++  GSIPRE+TYKLVCD L  AGE   LD++LHRRI+ G+ +R+ Q+  +KP+M  
Sbjct: 381 LAELIDGGSIPREYTYKLVCDALNSAGELNLLDNDLHRRIKYGIESRYRQIMKVKPIMTR 440

Query: 179 K 181
           K
Sbjct: 441 K 441


>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQGL-DDELHRRIEDGMRARFMQVRLLKPVMGN 178
           L+E+V  GSIPRE+TYKLVC+ +  A E  L DDE H RI+DG+  RF QV+ +KP+M  
Sbjct: 378 LLELVDGGSIPREYTYKLVCETMKSAREVNLIDDEFHNRIKDGIDERFRQVKKVKPIMVR 437

Query: 179 KSI 187
           K +
Sbjct: 438 KML 440


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQG-LDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           LVEMV +G +PRE+TYKLV D L+  G  G LD+ELH+R+ +G++ R+ +V  +KPVM  
Sbjct: 377 LVEMVEAGLVPREYTYKLVWDALSSEGMAGTLDEELHKRMREGIQQRYRRVMKIKPVMAR 436

Query: 179 KSIFAREQQ*YTFHKL 226
           K +  +      FH++
Sbjct: 437 KDVVQKSD----FHEI 448


>gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thaliana]
          Length = 410

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAG-EQGLDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           +VEMV +G +PRE+TYKLVCD L+  G    LD+ELH+R+ +G++ R+ +V  +KP M  
Sbjct: 329 VVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQRYSRVMKIKPTMAR 388

Query: 179 KSIFAREQQ*YTFHKL 226
           K +  +      FHK+
Sbjct: 389 KEVVRK-----YFHKI 399


>ref|XP_004292714.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Fragaria vesca subsp. vesca]
          Length = 444

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQG-LDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           LVE+V  GSIPRE+TY LVC+ L+ AGE   LDD L  RIEDGM+ R+  +  +KP+M  
Sbjct: 376 LVELVDGGSIPREYTYNLVCNALSSAGEVNVLDDGLRERIEDGMQRRYKHMMKVKPIMTR 435

Query: 179 K 181
           K
Sbjct: 436 K 436


>ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332197853|gb|AEE35974.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 458

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAG-EQGLDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           +VEMV +G +PRE+TYKLVCD L+  G    LD+ELH+R+ +G++ R+ +V  +KP M  
Sbjct: 377 VVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQQRYSRVMKIKPTMAR 436

Query: 179 KSIFAREQQ*YTFHKL 226
           K +  +      FHK+
Sbjct: 437 KEVVRK-----YFHKI 447


>ref|XP_006472819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like isoform X1 [Citrus sinensis]
           gi|568837618|ref|XP_006472820.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like isoform X2 [Citrus sinensis]
          Length = 451

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQG-LDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           L E+V  GS+PRE+TYKLVCD L  A E   LDD L +RI DG+  RF QV  +KP+M +
Sbjct: 381 LAELVDGGSVPREYTYKLVCDALNAAEEPSLLDDGLRKRIRDGIEYRFRQVMKVKPIMKH 440

Query: 179 KSI 187
           K +
Sbjct: 441 KEL 443


>ref|XP_006434253.1| hypothetical protein CICLE_v10003743mg [Citrus clementina]
           gi|557536375|gb|ESR47493.1| hypothetical protein
           CICLE_v10003743mg [Citrus clementina]
          Length = 451

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQGL-DDELHRRIEDGMRARFMQVRLLKPVMGN 178
           L E+V  GS+PRE+TYKLVCD L  A E  L DD L +RI DG+  RF QV  +KP+M +
Sbjct: 381 LAELVDGGSVPREYTYKLVCDALNAAEEPSLPDDGLRKRIRDGIENRFRQVMKVKPIMKH 440

Query: 179 KSI 187
           K +
Sbjct: 441 KEL 443


>gb|EXB60117.1| hypothetical protein L484_013382 [Morus notabilis]
          Length = 444

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQG-LDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           LVE+V +GS+PRE+TYKLVCD L  AG+   LDD +H+RI+DG+  RF Q+   K +M  
Sbjct: 377 LVELVDAGSVPREYTYKLVCDALMSAGQAYLLDDGMHKRIKDGIENRFKQLGKFKLMMTR 436

Query: 179 KSIFARE 199
           +   ++E
Sbjct: 437 RGCDSKE 443


>ref|XP_006604178.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Glycine max]
          Length = 446

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQGL---DDELHRRIEDGMRARFMQVRLLKPVM 172
           LVE+V  GS+PRE+TY LVCD L  AGE GL    D +H+RI+DG+  R+ Q+  +KPVM
Sbjct: 375 LVELVEGGSVPREYTYGLVCDRLRAAGEGGLLEDHDGVHKRIKDGIWNRYRQMMKVKPVM 434

Query: 173 GNK 181
             K
Sbjct: 435 ARK 437


>gb|ESW33688.1| hypothetical protein PHAVU_001G090600g [Phaseolus vulgaris]
           gi|561035159|gb|ESW33689.1| hypothetical protein
           PHAVU_001G090600g [Phaseolus vulgaris]
          Length = 445

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQGL---DDELHRRIEDGMRARFMQVRLLKPVM 172
           LVE+V SGS+PRE+TY LVCD L  AGE GL   +  +H+RI+DG+  R+ Q+  +KPVM
Sbjct: 374 LVELVDSGSVPREYTYGLVCDALRAAGECGLLLEEGGVHKRIKDGIWNRYRQMMKVKPVM 433

Query: 173 GNK 181
             +
Sbjct: 434 ARR 436


>gb|EOY16374.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
           [Theobroma cacao]
          Length = 438

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQGL-DDELHRRIEDGMRARFMQVRLLKPV 169
           L+E++S GSIPRE+TYKLVCD L   G   L DDELH+RI DG+ +R  QV  +K +
Sbjct: 379 LLELISGGSIPREYTYKLVCDTLNSVGAANLIDDELHKRIRDGIESRCRQVMKVKQI 435


>ref|XP_006302269.1| hypothetical protein CARUB_v10020312mg [Capsella rubella]
           gi|482570979|gb|EOA35167.1| hypothetical protein
           CARUB_v10020312mg [Capsella rubella]
          Length = 438

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQG-LDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           +VEM+ +G IPRE+TYKLV D L+  G  G LD+ELH+R+ +G+  R+ +V  +KP+M  
Sbjct: 375 VVEMLEAGWIPREYTYKLVLDALSSEGMVGTLDEELHKRMREGIEQRYRRVMRIKPIMAR 434

Query: 179 KSI 187
           K I
Sbjct: 435 KEI 437


>ref|XP_006390093.1| hypothetical protein EUTSA_v10019853mg [Eutrema salsugineum]
           gi|557086527|gb|ESQ27379.1| hypothetical protein
           EUTSA_v10019853mg [Eutrema salsugineum]
          Length = 451

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAG-EQGLDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           +VEMV +G +PRE+TYK+V D L+  G    LD+ELH+RI +G+  R+ +V  +KPVM  
Sbjct: 377 MVEMVEAGLVPREYTYKVVLDALSSEGMSSTLDEELHKRIREGIEHRYRRVMKIKPVMAR 436

Query: 179 K 181
           K
Sbjct: 437 K 437


>ref|XP_004512781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cicer arietinum]
          Length = 441

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGE-QGLDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           +VE+V  G +PRE+TYKLVCDGL   GE + L+ E+H+RI+DG+  R+ +    KPVM  
Sbjct: 372 VVELVDRGFVPREYTYKLVCDGLVLKGEDELLNCEMHQRIKDGILERYRRTMKFKPVMNR 431

Query: 179 K 181
           K
Sbjct: 432 K 432


>gb|EOY16373.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao]
          Length = 586

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQGL-DDELHRRIEDGMRARFMQV 151
           L+E++S GSIPRE+TYKLVCD L   G   L DDELH+RI DG+ +R  QV
Sbjct: 379 LLELISGGSIPREYTYKLVCDTLNSVGAANLIDDELHKRIRDGIESRCRQV 429


>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQG-LDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           L+E+V  GS+PRE+TYK+VCD L  AGE   L DEL  RIE+G+  R+ QV  +K +M +
Sbjct: 369 LIELVDGGSVPREYTYKVVCDSLRSAGEANMLGDELRGRIENGIENRYKQVMKVKLIMTH 428

Query: 179 K 181
           +
Sbjct: 429 R 429


>emb|CBI15606.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGEQG-LDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           L+E+V  GS+PRE+TYK+VCD L  AGE   L DEL  RIE+G+  R+ QV  +K +M +
Sbjct: 318 LIELVDGGSVPREYTYKVVCDSLRSAGEANMLGDELRGRIENGIENRYKQVMKVKLIMTH 377

Query: 179 K 181
           +
Sbjct: 378 R 378


>ref|XP_006351204.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Solanum tuberosum]
          Length = 440

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGE-QGLDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           LVE+   GSIPRE+TYKLV D L  +G+   LD+EL  R+EDG++ R  QV  +KP++ +
Sbjct: 377 LVELAEQGSIPREYTYKLVRDALESSGKIDLLDEELCTRLEDGIKGRIRQVMKVKPLLQH 436

Query: 179 KSI 187
           +S+
Sbjct: 437 QSV 439


>ref|XP_004244895.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Solanum lycopersicum]
          Length = 426

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
 Frame = +2

Query: 2   LVEMVSSGSIPREFTYKLVCDGLAHAGE-QGLDDELHRRIEDGMRARFMQVRLLKPVMGN 178
           LVE+   GSIPRE+TYKLV D L  +G+   LD+EL  R+EDG++ R  QV  +KP++ +
Sbjct: 361 LVEVAEQGSIPREYTYKLVRDALESSGKIDLLDEELCTRLEDGIKGRIRQVMKVKPLLQH 420

Query: 179 KSI 187
           +++
Sbjct: 421 QTV 423