BLASTX nr result

ID: Zingiber24_contig00051356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00051356
         (312 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]    55   1e-05

>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
 Frame = -1

Query: 312 VIFSFSGFQVKDPRMGAIIHQGLT*RQCLFLVCVHFSLPLALSSFVISLPVWHSRLGR-- 139
           + F  S F VKD R GA + +G T +  ++   V   L LA SS   S   WH RLG   
Sbjct: 316 ITFLPSSFLVKDLRTGATLLKGKT-KDGVYEWLVSSPL-LAFSSVKTSSSEWHHRLGHPA 373

Query: 138 --VLCQLXXXXXXXXXXXXVRHFYCNSCQCNKSHKLPFHDPLLSSQFP 1
             +L  +            + HF CN+C CNKSHKL F +  ++S  P
Sbjct: 374 FPILKHVISTNNLALSSSSLLHFSCNTCHCNKSHKLSFSNSTINSSRP 421


Top