BLASTX nr result
ID: Zingiber24_contig00051347
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00051347
(326 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006649945.1| PREDICTED: three prime repair exonuclease 2-... 87 3e-15
ref|XP_004984659.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
ref|XP_002468000.1| hypothetical protein SORBIDRAFT_01g037840 [S... 82 7e-14
gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japo... 80 2e-13
gb|EEC75068.1| hypothetical protein OsI_11194 [Oryza sativa Indi... 80 2e-13
ref|NP_001049864.1| Os03g0301400 [Oryza sativa Japonica Group] g... 80 2e-13
gb|ACN27500.1| unknown [Zea mays] gi|224030613|gb|ACN34382.1| un... 79 6e-13
gb|ACG42491.1| DNA polymerase III subunit epsilon [Zea mays] 79 6e-13
ref|NP_001131224.1| uncharacterized protein LOC100192533 [Zea ma... 79 6e-13
dbj|BAK07596.1| predicted protein [Hordeum vulgare subsp. vulgare] 79 8e-13
ref|XP_003558104.1| PREDICTED: DNA polymerase III polC-type-like... 74 3e-11
ref|XP_006855354.1| hypothetical protein AMTR_s00057p00109500 [A... 69 7e-10
ref|XP_006472167.1| PREDICTED: uncharacterized protein LOC102613... 67 2e-09
ref|XP_003579312.1| PREDICTED: DNA polymerase III polC-type-like... 66 6e-09
ref|XP_006652848.1| PREDICTED: uncharacterized protein LOC102710... 65 9e-09
ref|XP_006433496.1| hypothetical protein CICLE_v10001747mg [Citr... 64 2e-08
gb|EMJ07495.1| hypothetical protein PRUPE_ppa008284mg [Prunus pe... 64 2e-08
gb|EXC11324.1| DNA polymerase III polC-type [Morus notabilis] 64 3e-08
gb|EXB55047.1| DNA polymerase III polC-type [Morus notabilis] 64 3e-08
emb|CBI39565.3| unnamed protein product [Vitis vinifera] 64 3e-08
>ref|XP_006649945.1| PREDICTED: three prime repair exonuclease 2-like [Oryza
brachyantha]
Length = 310
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = -2
Query: 325 ASLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
ASL +LREHY IPL G AHRAMQDVT LCYV Q++TF+LKLTVPQLL+K+FR
Sbjct: 248 ASLDSLREHYKIPLVGSAHRAMQDVTTLCYVLQKLTFELKLTVPQLLEKSFR 299
>ref|XP_004984659.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like isoform X2 [Setaria italica]
gi|514819937|ref|XP_004984660.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g50990-like isoform X3 [Setaria italica]
Length = 313
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
SL LRE Y IPLTG AHRAMQDVT LCYV Q++TF+LKLTVPQLL+K+FR
Sbjct: 252 SLEKLRERYKIPLTGSAHRAMQDVTTLCYVLQKLTFELKLTVPQLLEKSFR 302
>ref|XP_002468000.1| hypothetical protein SORBIDRAFT_01g037840 [Sorghum bicolor]
gi|241921854|gb|EER94998.1| hypothetical protein
SORBIDRAFT_01g037840 [Sorghum bicolor]
Length = 583
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
SL LRE Y IPLTG AHRAMQDVT LCYV Q++TF+LKLTVPQLL+K+F+
Sbjct: 522 SLKNLRERYNIPLTGSAHRAMQDVTTLCYVLQKLTFELKLTVPQLLEKSFQ 572
>gb|EEE58895.1| hypothetical protein OsJ_10524 [Oryza sativa Japonica Group]
Length = 901
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
SL LREHY IPL G AHRAMQDV LCYV Q++TF+LKLTVPQLL+++FR
Sbjct: 840 SLDNLREHYKIPLAGSAHRAMQDVITLCYVLQKLTFELKLTVPQLLERSFR 890
>gb|EEC75068.1| hypothetical protein OsI_11194 [Oryza sativa Indica Group]
Length = 146
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
SL LREHY IPL G AHRAMQDV LCYV Q++TF+LKLTVPQLL+++FR
Sbjct: 85 SLDNLREHYKIPLAGSAHRAMQDVITLCYVLQKLTFELKLTVPQLLERSFR 135
>ref|NP_001049864.1| Os03g0301400 [Oryza sativa Japonica Group]
gi|108707691|gb|ABF95486.1| exonuclease family protein,
expressed [Oryza sativa Japonica Group]
gi|113548335|dbj|BAF11778.1| Os03g0301400 [Oryza sativa
Japonica Group] gi|215678888|dbj|BAG95325.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 313
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
SL LREHY IPL G AHRAMQDV LCYV Q++TF+LKLTVPQLL+++FR
Sbjct: 252 SLDNLREHYKIPLAGSAHRAMQDVITLCYVLQKLTFELKLTVPQLLERSFR 302
>gb|ACN27500.1| unknown [Zea mays] gi|224030613|gb|ACN34382.1| unknown [Zea mays]
gi|414866403|tpg|DAA44960.1| TPA: DNA polymerase III
subunit epsilon isoform 1 [Zea mays]
gi|414866404|tpg|DAA44961.1| TPA: DNA polymerase III
subunit epsilon isoform 2 [Zea mays]
gi|414866405|tpg|DAA44962.1| TPA: DNA polymerase III
subunit epsilon isoform 3 [Zea mays]
Length = 315
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
SL LRE Y IPLTG AHRAMQDVT L YV Q++TF+LKLTVPQLL+K+FR
Sbjct: 254 SLKFLRERYKIPLTGSAHRAMQDVTTLSYVLQKLTFELKLTVPQLLEKSFR 304
>gb|ACG42491.1| DNA polymerase III subunit epsilon [Zea mays]
Length = 315
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
SL LRE Y IPLTG AHRAMQDVT L YV Q++TF+LKLTVPQLL+K+FR
Sbjct: 254 SLKFLRERYKIPLTGSAHRAMQDVTTLSYVLQKLTFELKLTVPQLLEKSFR 304
>ref|NP_001131224.1| uncharacterized protein LOC100192533 [Zea mays]
gi|194690922|gb|ACF79545.1| unknown [Zea mays]
Length = 315
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
SL LRE Y IPLTG AHRAMQDVT L YV Q++TF+LKLTVPQLL+K+FR
Sbjct: 254 SLKFLRERYKIPLTGSAHRAMQDVTTLSYVLQKLTFELKLTVPQLLEKSFR 304
>dbj|BAK07596.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 323
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = -2
Query: 325 ASLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
AS+ L EHY IP+ G AHRAM+DVT LCYV Q++TF+LKLTVPQLL+K+FR
Sbjct: 261 ASMKNLVEHYKIPVDGKAHRAMRDVTALCYVLQKLTFELKLTVPQLLEKSFR 312
>ref|XP_003558104.1| PREDICTED: DNA polymerase III polC-type-like [Brachypodium
distachyon]
Length = 313
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = -2
Query: 325 ASLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
A+L L E Y IP+ G AHRAMQDVT LCYV Q++T +LK+TVPQLL+ +FR
Sbjct: 251 ATLKTLTERYKIPVNGDAHRAMQDVTALCYVLQKLTLELKITVPQLLENSFR 302
>ref|XP_006855354.1| hypothetical protein AMTR_s00057p00109500 [Amborella trichopoda]
gi|548859120|gb|ERN16821.1| hypothetical protein
AMTR_s00057p00109500 [Amborella trichopoda]
Length = 312
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = -2
Query: 325 ASLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
+SL ALRE+YGIPL+G AHRAM DV L V QR+TFDLKL V LL+++F+
Sbjct: 255 SSLGALREYYGIPLSGSAHRAMSDVNTLSLVLQRMTFDLKLPVSGLLERSFK 306
>ref|XP_006472167.1| PREDICTED: uncharacterized protein LOC102613049 [Citrus sinensis]
Length = 339
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFRP 167
SL ALRE+YGIPL G AHRAM DV L + QR+TFDLKL++ L+++ F P
Sbjct: 269 SLQALREYYGIPLVGSAHRAMADVNCLSLILQRLTFDLKLSLCDLIERGFTP 320
>ref|XP_003579312.1| PREDICTED: DNA polymerase III polC-type-like [Brachypodium
distachyon]
Length = 265
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKA 176
+L ALR+HYGI + G AHRAMQDVT LC VFQ+ITFDL L+ L++ A
Sbjct: 207 NLEALRKHYGIRMEGSAHRAMQDVTTLCQVFQKITFDLNLSYEGLMNDA 255
>ref|XP_006652848.1| PREDICTED: uncharacterized protein LOC102710867 [Oryza brachyantha]
Length = 260
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFR 170
+L ALREHYGI G AHRAM+DV +L VFQ++TFDLKLT +L+++A R
Sbjct: 202 NLEALREHYGICSNGTAHRAMRDVMILGQVFQKMTFDLKLTYKELMNEAMR 252
>ref|XP_006433496.1| hypothetical protein CICLE_v10001747mg [Citrus clementina]
gi|567881877|ref|XP_006433497.1| hypothetical protein
CICLE_v10001747mg [Citrus clementina]
gi|557535618|gb|ESR46736.1| hypothetical protein
CICLE_v10001747mg [Citrus clementina]
gi|557535619|gb|ESR46737.1| hypothetical protein
CICLE_v10001747mg [Citrus clementina]
Length = 339
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAFRP 167
SL ALRE+Y IPL G AHRAM DV L + QR+TFDLKL++ L+++ F P
Sbjct: 269 SLQALREYYRIPLVGSAHRAMADVNCLSLILQRLTFDLKLSLCDLIERGFTP 320
>gb|EMJ07495.1| hypothetical protein PRUPE_ppa008284mg [Prunus persica]
Length = 338
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/50 (64%), Positives = 37/50 (74%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAF 173
SL ALREH GIPL G AHRAM DV VL VFQR+T+ LKL + L++ AF
Sbjct: 275 SLQALREHLGIPLDGSAHRAMSDVKVLAAVFQRLTYMLKLPLASLVEDAF 324
>gb|EXC11324.1| DNA polymerase III polC-type [Morus notabilis]
Length = 370
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAF 173
+L LREHY IPL GPAHRAM DV L + QR+T+DLKL++ L+ ++F
Sbjct: 306 NLQVLREHYEIPLVGPAHRAMSDVKCLSLILQRLTYDLKLSLSDLIGRSF 355
>gb|EXB55047.1| DNA polymerase III polC-type [Morus notabilis]
Length = 370
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = -2
Query: 322 SLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAF 173
+L LREHY IPL GPAHRAM DV L + QR+T+DLKL++ L+ ++F
Sbjct: 306 NLQVLREHYEIPLVGPAHRAMSDVKCLSLILQRLTYDLKLSLSDLIGRSF 355
>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = -2
Query: 325 ASLSALREHYGIPLTGPAHRAMQDVTVLCYVFQRITFDLKLTVPQLLDKAF 173
ASL ALRE+Y IPL GPAHR + DV L V Q +TF+LK++V LLD++F
Sbjct: 267 ASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVANLLDRSF 317