BLASTX nr result
ID: Zingiber24_contig00051295
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00051295
(408 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 212 4e-53
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 210 2e-52
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 205 4e-51
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 205 4e-51
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 203 2e-50
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 198 7e-49
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 192 3e-47
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 184 1e-44
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 167 2e-39
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 161 7e-38
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 160 1e-37
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 160 2e-37
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 160 2e-37
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 160 2e-37
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 155 4e-36
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 155 4e-36
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 155 4e-36
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 155 4e-36
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 155 4e-36
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus... 154 9e-36
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 212 bits (540), Expect = 4e-53
Identities = 95/134 (70%), Positives = 110/134 (82%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y ++RPV NGLLD RMGAANK G C+TCHG+F+ECPGHFGYLKL LPVFNVGFFN IL+
Sbjct: 51 YNQEMRPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKLSICPWCGSKNG 47
+LKCICK CSR+LLVE DR +LKKMRNPKAD K+A+M K+RD+CKLS CPWCG NG
Sbjct: 111 VLKCICKGCSRVLLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFING 170
Query: 46 VVKKTKSSLAIAHD 5
V KK ++ L I HD
Sbjct: 171 VAKKGRAGLIILHD 184
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 210 bits (534), Expect = 2e-52
Identities = 93/134 (69%), Positives = 111/134 (82%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y +++PV NGLLD RMGAANK G C+TCHG+F+ECPGHFGYLKL LPVFNVGFFN IL+
Sbjct: 51 YNHEMKPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKLSICPWCGSKNG 47
+LKCICK+CSR+LL+E DR +LKKMRNPKAD K+A+M K+RD+CKLS CPWCG NG
Sbjct: 111 VLKCICKSCSRVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFING 170
Query: 46 VVKKTKSSLAIAHD 5
V KK ++ L I HD
Sbjct: 171 VAKKGRAGLIILHD 184
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 205 bits (522), Expect = 4e-51
Identities = 90/134 (67%), Positives = 108/134 (80%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
YG D++PV NGLLDPRMG NK C+TCHG FS+CPGHFGYLKL LPVFNVGFFN IL+
Sbjct: 51 YGHDMKPVPNGLLDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKLSICPWCGSKNG 47
+LKCICK+CSR+LL E DR+ +LKKMRNP+AD K+A M K+RD+CKLS CP C +NG
Sbjct: 111 VLKCICKSCSRVLLFEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSCCPRCDYRNG 170
Query: 46 VVKKTKSSLAIAHD 5
VVKK ++ L + HD
Sbjct: 171 VVKKGRAGLIVVHD 184
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 205 bits (522), Expect = 4e-51
Identities = 93/135 (68%), Positives = 111/135 (82%), Gaps = 1/135 (0%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y +++PV NGLLD RMGAANK G C+TCHG+F+ECPGHFGYLKL LPVFNVGFFN IL+
Sbjct: 51 YNHEMKPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKLSICPWCGSKNG 47
+LKCICK+CSR+LL+E DR +LKKMRNPKAD K+A+M K+RD+CKLS CPWCG NG
Sbjct: 111 VLKCICKSCSRVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFING 170
Query: 46 -VVKKTKSSLAIAHD 5
V KK ++ L I HD
Sbjct: 171 SVAKKGRAGLIILHD 185
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 203 bits (517), Expect = 2e-50
Identities = 89/134 (66%), Positives = 106/134 (79%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y D+ PV NGLLDPRMG K G C TCHG FS+CPGHFGYLKL LPVFNVGFFN IL+
Sbjct: 51 YDRDMTPVPNGLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKLSICPWCGSKNG 47
+LKCICK+CSR+LL+E DR+ +LKKMRNP+AD K+A M K+RD+CKLS CP C +NG
Sbjct: 111 VLKCICKSCSRVLLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSCCPRCDYRNG 170
Query: 46 VVKKTKSSLAIAHD 5
VVKK ++ L + HD
Sbjct: 171 VVKKGRAGLIVVHD 184
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 198 bits (503), Expect = 7e-49
Identities = 91/134 (67%), Positives = 106/134 (79%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
YG D++PV NGLLDPRMGAANK G C TCHG++ ECPGHFGYLKL LPVFNVGFFN+IL+
Sbjct: 51 YGNDMKPVPNGLLDPRMGAANKFGECATCHGSYHECPGHFGYLKLVLPVFNVGFFNNILD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKLSICPWCGSKNG 47
+LK ICK CSRILL E D++ +LKKMRNP+ + K ALM K+RD+CKLS CP CG NG
Sbjct: 111 VLKSICKGCSRILLHEKDQREFLKKMRNPRLEPLHKAALMKKVRDKCKLSRCPSCGYING 170
Query: 46 VVKKTKSSLAIAHD 5
V KK + L I HD
Sbjct: 171 VAKKGRPGLLIVHD 184
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Setaria italica]
Length = 1397
Score = 192 bits (489), Expect = 3e-47
Identities = 88/137 (64%), Positives = 106/137 (77%), Gaps = 3/137 (2%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGV---CTTCHGNFSECPGHFGYLKLTLPVFNVGFFNS 236
Y D++PV NGLLD RMG A+K C+TCHG F+ECPGHFGYLKL LPVFNVGFFN
Sbjct: 51 YEHDMKPVPNGLLDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNC 110
Query: 235 ILNILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKLSICPWCGS 56
IL++LKCICK CSR+LL E DR+ +LKKMRNP+AD K+A+M K+RD+CKL+ CP C
Sbjct: 111 ILDVLKCICKGCSRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCKLTCCPRCEY 170
Query: 55 KNGVVKKTKSSLAIAHD 5
KNGVVKK + L + HD
Sbjct: 171 KNGVVKKGRVGLIVIHD 187
>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 184 bits (467), Expect = 1e-44
Identities = 82/139 (58%), Positives = 107/139 (76%), Gaps = 5/139 (3%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y + L+PV NGLLDPRMGA++K G C TCHG+++ECPGHFGY+KL LPVFNVG+FN IL
Sbjct: 54 YDSSLKPVPNGLLDPRMGASDKCGECATCHGSYTECPGHFGYIKLALPVFNVGYFNKILA 113
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKLSICPWCGSKNG 47
+LKCICK CSR+LL E+ + +LKKMRNP+AD ++++M K+RD+C+ S C WCG NG
Sbjct: 114 VLKCICKGCSRVLLTENIHQEFLKKMRNPRAD---RSSIMIKVRDKCRPSRCSWCGYING 170
Query: 46 VVKK-----TKSSLAIAHD 5
+VKK K ++ I HD
Sbjct: 171 IVKKEGRRALKQTVVIVHD 189
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 167 bits (422), Expect = 2e-39
Identities = 73/132 (55%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Frame = -3
Query: 397 DLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNILK 218
DL+P ++G+LD RMG + K+G C TC G+F CPGHFGYLKL LPVF+VG+F + + +L+
Sbjct: 55 DLKPAEHGVLDTRMGFSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQ 114
Query: 217 CICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCK-LSICPWCGSKNGVV 41
CICK+C+RILL E++RK +LKK+RNP+A++ KN + K+ D+CK + ICP CG NGVV
Sbjct: 115 CICKSCARILLFEEERKQFLKKIRNPRAELHQKNDFVKKVIDKCKRVRICPRCGDYNGVV 174
Query: 40 KKTKSSLAIAHD 5
KK + I+HD
Sbjct: 175 KKAGPTFRISHD 186
>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
Length = 1248
Score = 161 bits (408), Expect = 7e-38
Identities = 75/128 (58%), Positives = 99/128 (77%)
Frame = -3
Query: 400 ADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILNIL 221
A+L + G GAANK G C TCHG+++ECPGHFGYLKL LPVFNVGFFN+IL+++
Sbjct: 56 AELHAIMEG------GAANKQGECGTCHGSYTECPGHFGYLKLALPVFNVGFFNNILDVV 109
Query: 220 KCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRCKLSICPWCGSKNGVV 41
KCICK CSR+LLVE DR+ +LKKMR P+A+ +K ALM K+RD+CKLS CP C + +G
Sbjct: 110 KCICKGCSRVLLVEKDRREFLKKMRQPRAEPLVKFALMKKVRDKCKLSRCP-CKTLDGST 168
Query: 40 KKTKSSLA 17
++ +S+L+
Sbjct: 169 EELRSALS 176
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 160 bits (406), Expect = 1e-37
Identities = 77/140 (55%), Positives = 95/140 (67%), Gaps = 6/140 (4%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y RP++ GLLDPRMG ANK+G C TCHGNF++CPGH+GYL L LPV+NVG+ ++IL+
Sbjct: 46 YDPKSRPIEGGLLDPRMGPANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILD 105
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC------KLSICPW 65
ILKCICK+CSRI+L E K YLK+MR+PK D K +M I +C K C
Sbjct: 106 ILKCICKSCSRIILDEKLCKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCWR 165
Query: 64 CGSKNGVVKKTKSSLAIAHD 5
CG NG VKK + L I HD
Sbjct: 166 CGYVNGTVKKAVAMLGIIHD 185
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 160 bits (405), Expect = 2e-37
Identities = 78/139 (56%), Positives = 94/139 (67%), Gaps = 5/139 (3%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y ++ P++ GLLDPRMG ANK+ C TCHG FS CPGH+GYL L LPV+NVG+ ++IL+
Sbjct: 55 YSSNRVPIEGGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILD 114
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC-----KLSICPWC 62
ILKCICK CSR+LL E K YLKKMRNPK + K LM I +C K CP C
Sbjct: 115 ILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRC 174
Query: 61 GSKNGVVKKTKSSLAIAHD 5
G NG+VKK + L I HD
Sbjct: 175 GYINGMVKKAVAVLGIIHD 193
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 160 bits (404), Expect = 2e-37
Identities = 78/141 (55%), Positives = 95/141 (67%), Gaps = 7/141 (4%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y A+ +P++NGLLDPRMG ANK G C TC GNF +CPGH GYL L LPV+NVG+ ++I++
Sbjct: 48 YDANRKPIENGLLDPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVD 107
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC-------KLSICP 68
ILKCICK+CSR+LL E K YLKKMR+ K + K LM KI +C K C
Sbjct: 108 ILKCICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCS 167
Query: 67 WCGSKNGVVKKTKSSLAIAHD 5
CG NG+VKK S L I HD
Sbjct: 168 RCGYMNGIVKKAVSVLGIIHD 188
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 160 bits (404), Expect = 2e-37
Identities = 78/141 (55%), Positives = 95/141 (67%), Gaps = 7/141 (4%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y A+ +P++NGLLDPRMG ANK G C TC GNF +CPGH GYL L LPV+NVG+ ++I++
Sbjct: 48 YDANRKPIENGLLDPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVD 107
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC-------KLSICP 68
ILKCICK+CSR+LL E K YLKKMR+ K + K LM KI +C K C
Sbjct: 108 ILKCICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCS 167
Query: 67 WCGSKNGVVKKTKSSLAIAHD 5
CG NG+VKK S L I HD
Sbjct: 168 RCGYMNGIVKKAVSVLGIIHD 188
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 155 bits (393), Expect = 4e-36
Identities = 74/141 (52%), Positives = 95/141 (67%), Gaps = 7/141 (4%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y + +P+QNGLLDPRMG NK G C TCHGNF ECPGH+GYL L LPV+NVG+ ++++
Sbjct: 51 YESTKKPIQNGLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC-------KLSICP 68
ILKCICK CS ILL + +R+ LKKMRNP+ + K+ L K+ RC K + C
Sbjct: 111 ILKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCS 170
Query: 67 WCGSKNGVVKKTKSSLAIAHD 5
CG NG+VKK + L I H+
Sbjct: 171 KCGYMNGMVKKLQ--LKITHE 189
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 155 bits (393), Expect = 4e-36
Identities = 74/141 (52%), Positives = 95/141 (67%), Gaps = 7/141 (4%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y + +P+QNGLLDPRMG NK G C TCHGNF ECPGH+GYL L LPV+NVG+ ++++
Sbjct: 51 YESTKKPIQNGLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC-------KLSICP 68
ILKCICK CS ILL + +R+ LKKMRNP+ + K+ L K+ RC K + C
Sbjct: 111 ILKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCS 170
Query: 67 WCGSKNGVVKKTKSSLAIAHD 5
CG NG+VKK + L I H+
Sbjct: 171 KCGYMNGMVKKLQ--LKITHE 189
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 155 bits (393), Expect = 4e-36
Identities = 68/102 (66%), Positives = 85/102 (83%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y +++P NGLLD RMGAANK G C TCHG+++ECPGHFGYLKL LPVFN+GFFN+IL+
Sbjct: 25 YEPNMKPAPNGLLDTRMGAANKQGECGTCHGSYTECPGHFGYLKLALPVFNIGFFNNILD 84
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTK 101
++KCICK CSR+LLVE DR+ +LKKMR P+A+ +K ALM K
Sbjct: 85 VVKCICKGCSRVLLVEKDRREFLKKMRQPRAEPLVKFALMKK 126
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 155 bits (393), Expect = 4e-36
Identities = 73/141 (51%), Positives = 96/141 (68%), Gaps = 7/141 (4%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y + +P+QNGLLDPRMG NK+G C TCHGNF ECPGH+GYL L LPV+NVG+ ++++
Sbjct: 51 YESTKKPIQNGLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC-------KLSICP 68
ILKCICK CS ILL + +R+ LKKMRNP+ + K+ L ++ RC K + C
Sbjct: 111 ILKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCS 170
Query: 67 WCGSKNGVVKKTKSSLAIAHD 5
CG NG+VKK + L I H+
Sbjct: 171 KCGYMNGMVKKLQ--LKITHE 189
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 155 bits (393), Expect = 4e-36
Identities = 75/140 (53%), Positives = 97/140 (69%), Gaps = 6/140 (4%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y A+ + + GLLD RMGA NK G C TC G+F++CPGHFGYL L LPV+NVG+ ++IL+
Sbjct: 51 YDANKKAIVGGLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILD 110
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADVAMKNALMTKIRDRC------KLSICPW 65
ILKCICK+CSR+L+ E RK+YLK+MRNP+ + KN LM +I +C K C
Sbjct: 111 ILKCICKSCSRVLVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCLR 170
Query: 64 CGSKNGVVKKTKSSLAIAHD 5
CG NG+VKK S + I HD
Sbjct: 171 CGYMNGMVKKAGSVVGIIHD 190
>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 154 bits (390), Expect = 9e-36
Identities = 77/136 (56%), Positives = 92/136 (67%), Gaps = 2/136 (1%)
Frame = -3
Query: 406 YGADLRPVQNGLLDPRMGAANKAGVCTTCHGNFSECPGHFGYLKLTLPVFNVGFFNSILN 227
Y + +P+ GLLDPRMG ANK+ C TCHGNF +CPGH+GYL L LPVFNVG+ SI+
Sbjct: 52 YDSFKKPIHGGLLDPRMGPANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVE 111
Query: 226 ILKCICKACSRILLVEDDRKTYLKKMRNPKADV--AMKNALMTKIRDRCKLSICPWCGSK 53
ILKCICK C+RILL ED RK +LKKMR+ K M + I+D K+ CP CG
Sbjct: 112 ILKCICKGCARILLDEDTRKKHLKKMRSSKKSELDKMDFVKVRIIKDCSKVVNCPRCGYI 171
Query: 52 NGVVKKTKSSLAIAHD 5
NG VKK +SL I HD
Sbjct: 172 NGSVKKLPASLIIMHD 187