BLASTX nr result
ID: Zingiber24_contig00051269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00051269
(289 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
gb|EOY29325.1| Pentatricopeptide repeat-containing protein, puta... 110 1e-22
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,... 110 2e-22
gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis] 109 4e-22
ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [A... 108 7e-22
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu... 106 4e-21
ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006450275.1| hypothetical protein CICLE_v10007356mg [Citr... 103 2e-20
ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sat... 101 9e-20
ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 100 2e-19
ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_006661947.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
ref|XP_004983977.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays] 100 2e-19
ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containi... 99 7e-19
gb|ESW08930.1| hypothetical protein PHAVU_009G086500g [Phaseolus... 98 1e-18
ref|XP_003603286.1| Pentatricopeptide repeat-containing protein ... 98 1e-18
>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product
[Vitis vinifera]
Length = 1113
Score = 114 bits (285), Expect = 1e-23
Identities = 52/69 (75%), Positives = 60/69 (86%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L I+GMV EA KMYEELQLKG PNVFTYNALIRG+S+SGN D AY++YKKM++GGC PN
Sbjct: 1043 LGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPN 1102
Query: 181 SGTFIQLPN 207
+GTF QLPN
Sbjct: 1103 TGTFAQLPN 1111
>gb|EOY29325.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 1112
Score = 110 bits (276), Expect = 1e-22
Identities = 49/65 (75%), Positives = 56/65 (86%)
Frame = +1
Query: 13 GMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGTF 192
GMV +A K YEELQL G PNV+TYNALIRGYSVSGN DHAY++YK+M++GGCSPN GTF
Sbjct: 1046 GMVEQAGKFYEELQLMGLEPNVYTYNALIRGYSVSGNPDHAYAVYKQMMVGGCSPNRGTF 1105
Query: 193 IQLPN 207
QLPN
Sbjct: 1106 AQLPN 1110
>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1113
Score = 110 bits (274), Expect = 2e-22
Identities = 48/69 (69%), Positives = 60/69 (86%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L ++GMV +A K+YEELQ G PNVFTYNALIRGYS+SGN+D AY++YK+M++GGCSPN
Sbjct: 1045 LGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPN 1104
Query: 181 SGTFIQLPN 207
+GTF QLPN
Sbjct: 1105 TGTFAQLPN 1113
>gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis]
Length = 1098
Score = 109 bits (272), Expect = 4e-22
Identities = 50/69 (72%), Positives = 57/69 (82%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L I+GMV +A MYEELQL+G P+VFTYNALIR YS SGN DHAY++YKKM+IGGCSPN
Sbjct: 1028 LGIAGMVEQAGSMYEELQLRGLEPDVFTYNALIRAYSASGNPDHAYAVYKKMMIGGCSPN 1087
Query: 181 SGTFIQLPN 207
TF QLPN
Sbjct: 1088 VSTFAQLPN 1096
>ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [Amborella trichopoda]
gi|548847948|gb|ERN07051.1| hypothetical protein
AMTR_s00019p00039970 [Amborella trichopoda]
Length = 1123
Score = 108 bits (270), Expect = 7e-22
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = +1
Query: 13 GMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGTF 192
G V EA MYEELQ KG PNVFTYNALIR YS++GNTDHAY++YKKM++GGC PN GTF
Sbjct: 1057 GRVEEAGAMYEELQRKGLEPNVFTYNALIRAYSIAGNTDHAYAVYKKMVVGGCEPNMGTF 1116
Query: 193 IQLPN 207
QLPN
Sbjct: 1117 AQLPN 1121
>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
gi|550337245|gb|EEE92232.2| hypothetical protein
POPTR_0006s28060g [Populus trichocarpa]
Length = 1115
Score = 106 bits (264), Expect = 4e-21
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L I GM+ EA K+YEELQ G +PNVFTYNALIRGY++SGN++ AY +YKKM++GGC PN
Sbjct: 1045 LGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPN 1104
Query: 181 SGTFIQLPN 207
+GTF QLPN
Sbjct: 1105 TGTFAQLPN 1113
>ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Citrus sinensis]
Length = 1107
Score = 103 bits (257), Expect = 2e-20
Identities = 46/66 (69%), Positives = 54/66 (81%)
Frame = +1
Query: 10 SGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGT 189
+GMV EA K+YE+LQ G PNVFTYNALIRGY SGN D AY++Y+KM++GGCSPN GT
Sbjct: 1040 AGMVEEARKLYEQLQEMGLEPNVFTYNALIRGYGTSGNPDSAYAVYEKMMVGGCSPNPGT 1099
Query: 190 FIQLPN 207
F QLPN
Sbjct: 1100 FAQLPN 1105
>ref|XP_006450275.1| hypothetical protein CICLE_v10007356mg [Citrus clementina]
gi|557553501|gb|ESR63515.1| hypothetical protein
CICLE_v10007356mg [Citrus clementina]
Length = 973
Score = 103 bits (257), Expect = 2e-20
Identities = 46/66 (69%), Positives = 54/66 (81%)
Frame = +1
Query: 10 SGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGT 189
+GMV EA K+YE+LQ G PNVFTYNALIRGY SGN D AY++Y+KM++GGCSPN GT
Sbjct: 906 AGMVEEARKLYEQLQEMGLEPNVFTYNALIRGYGTSGNPDSAYAVYEKMMVGGCSPNPGT 965
Query: 190 FIQLPN 207
F QLPN
Sbjct: 966 FAQLPN 971
>ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Solanum lycopersicum]
Length = 1131
Score = 103 bits (257), Expect = 2e-20
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L I GM+ EA +MYEELQ G P+VFTYNALIRGYS SG+ D AY++Y+KM++GGCSPN
Sbjct: 1063 LGIVGMLEEAGRMYEELQQLGLEPDVFTYNALIRGYSKSGDPDGAYAIYEKMMVGGCSPN 1122
Query: 181 SGTFIQLPN 207
SGTF QLPN
Sbjct: 1123 SGTFAQLPN 1131
>ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Solanum tuberosum]
Length = 1080
Score = 103 bits (256), Expect = 3e-20
Identities = 48/69 (69%), Positives = 57/69 (82%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L I GM+ EA +MYEELQ G P+VFTYNALIRGYS SG+ D AY++Y+KM++GGCSPN
Sbjct: 1012 LGIVGMLEEAGRMYEELQQFGLEPDVFTYNALIRGYSKSGDPDGAYAIYEKMMVGGCSPN 1071
Query: 181 SGTFIQLPN 207
SGTF QLPN
Sbjct: 1072 SGTFAQLPN 1080
>gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 101 bits (252), Expect = 9e-20
Identities = 45/66 (68%), Positives = 55/66 (83%)
Frame = +1
Query: 10 SGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGT 189
+G EA KMYEEL KG++PNVFTYNALIRGYSVSG+TD AY+ Y +M++GGC PNS T
Sbjct: 1013 AGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1072
Query: 190 FIQLPN 207
++QLPN
Sbjct: 1073 YMQLPN 1078
>ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 101 bits (251), Expect = 1e-19
Identities = 46/66 (69%), Positives = 55/66 (83%)
Frame = +1
Query: 10 SGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGT 189
+GMV +A KM+EELQ G PNVFTYNALIRG+S SGN D A+S++KKM+I GCSPN+GT
Sbjct: 1046 AGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGT 1105
Query: 190 FIQLPN 207
F QLPN
Sbjct: 1106 FAQLPN 1111
>ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 100 bits (250), Expect = 2e-19
Identities = 44/69 (63%), Positives = 57/69 (82%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L ++GMV +A +MYEELQL G P+VFTYNALIRGYS+S N +HAY++YK M++ GC+PN
Sbjct: 1043 LGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Query: 181 SGTFIQLPN 207
GT+ QLPN
Sbjct: 1103 IGTYAQLPN 1111
>ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 100 bits (250), Expect = 2e-19
Identities = 44/69 (63%), Positives = 57/69 (82%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L ++GMV +A +MYEELQL G P+VFTYNALIRGYS+S N +HAY++YK M++ GC+PN
Sbjct: 1043 LGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Query: 181 SGTFIQLPN 207
GT+ QLPN
Sbjct: 1103 IGTYAQLPN 1111
>ref|XP_006661947.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Oryza brachyantha]
Length = 1091
Score = 100 bits (249), Expect = 2e-19
Identities = 45/66 (68%), Positives = 55/66 (83%)
Frame = +1
Query: 10 SGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGT 189
+G EA KMYEEL KG++PNVFTYNALIRGYSVSG+TD AY+ Y +M++GGC PNS T
Sbjct: 1024 AGKGAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1083
Query: 190 FIQLPN 207
++QLPN
Sbjct: 1084 YMQLPN 1089
>ref|XP_004983977.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like, partial [Setaria italica]
Length = 1050
Score = 100 bits (249), Expect = 2e-19
Identities = 43/66 (65%), Positives = 57/66 (86%)
Frame = +1
Query: 10 SGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGT 189
+G EA +MYEEL +KG++P+VFTYNALIRGYSVSGNT++AY+ Y +M++GGC PNS T
Sbjct: 983 AGKAAEAGQMYEELLMKGWKPSVFTYNALIRGYSVSGNTENAYAAYGRMIVGGCLPNSST 1042
Query: 190 FIQLPN 207
++QLPN
Sbjct: 1043 YMQLPN 1048
>gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 100 bits (249), Expect = 2e-19
Identities = 44/66 (66%), Positives = 57/66 (86%)
Frame = +1
Query: 10 SGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGT 189
+G EAA+MYEEL KG++P+VFTYNALIRGYSVSG+TD+AY+ Y +M++GGC PNS T
Sbjct: 1024 AGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSST 1083
Query: 190 FIQLPN 207
++QLPN
Sbjct: 1084 YMQLPN 1089
>ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1089
Score = 98.6 bits (244), Expect = 7e-19
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L + GMV EA ++Y+EL L G P+VFTYNALIR YS SGNTD AY++YK M++GGCSPN
Sbjct: 1019 LGLVGMVEEAGRIYKELLLTGLEPDVFTYNALIRLYSTSGNTDDAYAVYKNMMVGGCSPN 1078
Query: 181 SGTFIQLPN 207
GT+ QLPN
Sbjct: 1079 VGTYAQLPN 1087
>gb|ESW08930.1| hypothetical protein PHAVU_009G086500g [Phaseolus vulgaris]
Length = 1106
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1
Query: 10 SGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPNSGT 189
+GMV A KM+EELQL G PNVFTYNALIRG+++SGN D A+S+ KKM++ GCSPN+GT
Sbjct: 1039 AGMVDRAGKMFEELQLMGLEPNVFTYNALIRGHTMSGNKDRAFSVLKKMMVVGCSPNAGT 1098
Query: 190 FIQLPN 207
F QLP+
Sbjct: 1099 FAQLPD 1104
>ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = +1
Query: 1 LPISGMVTEAAKMYEELQLKGFRPNVFTYNALIRGYSVSGNTDHAYSMYKKMLIGGCSPN 180
L I+G V A KMYEELQL G P+VFTYNALIRG+S+SGN D A+S++KKM++ GCSPN
Sbjct: 1051 LGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPN 1110
Query: 181 SGTFIQLPN 207
+ TF QLPN
Sbjct: 1111 TETFAQLPN 1119