BLASTX nr result

ID: Zingiber24_contig00051241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00051241
         (262 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vi...    72   6e-11
ref|XP_002465223.1| hypothetical protein SORBIDRAFT_01g034490 [S...    72   8e-11
ref|XP_004984280.1| PREDICTED: CST complex subunit STN1-like [Se...    70   4e-10
ref|NP_001050181.1| Os03g0366900 [Oryza sativa Japonica Group] g...    69   5e-10
ref|XP_006345383.1| PREDICTED: CST complex subunit STN1-like [So...    69   7e-10
ref|XP_004231127.1| PREDICTED: CST complex subunit STN1-like [So...    69   7e-10
gb|ACN27497.1| unknown [Zea mays] gi|413955646|gb|AFW88295.1| OB...    69   7e-10
ref|XP_006650114.1| PREDICTED: CST complex subunit STN1-like [Or...    68   1e-09
ref|XP_002307601.1| OB-fold nucleic acid binding domain-containi...    67   2e-09
gb|EMS53436.1| CST complex subunit STN1 [Triticum urartu]              67   2e-09
gb|ADE77185.1| unknown [Picea sitchensis]                              67   2e-09
gb|EMS59713.1| CST complex subunit STN1 [Triticum urartu]              67   3e-09
ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatul...    67   3e-09
gb|EPS68315.1| hypothetical protein M569_06458, partial [Genlise...    66   4e-09
gb|EEC75328.1| hypothetical protein OsI_11709 [Oryza sativa Indi...    66   4e-09
gb|EXB93354.1| CST complex subunit STN1 [Morus notabilis]              65   7e-09
ref|XP_006444029.1| hypothetical protein CICLE_v10022619mg [Citr...    65   7e-09
gb|AFK40847.1| unknown [Medicago truncatula]                           65   9e-09
ref|NP_001151468.1| OB-fold nucleic acid binding domain containi...    65   9e-09
ref|XP_004145384.1| PREDICTED: CST complex subunit STN1-like [Cu...    65   1e-08

>ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vitis vinifera]
           gi|147810449|emb|CAN65336.1| hypothetical protein
           VITISV_023849 [Vitis vinifera]
          Length = 165

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/61 (59%), Positives = 45/61 (73%)
 Frame = -1

Query: 196 EAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSCYDRAA 17
           +A+ V+LG LVRVRG+IT    G +Q+ V +V VE DPNME LHW+DCI+LAR CYD   
Sbjct: 104 QASEVKLGVLVRVRGRIT-AYRGTVQITVSNVIVERDPNMEILHWLDCIKLARKCYDVMP 162

Query: 16  H 14
           H
Sbjct: 163 H 163


>ref|XP_002465223.1| hypothetical protein SORBIDRAFT_01g034490 [Sorghum bicolor]
           gi|241919077|gb|EER92221.1| hypothetical protein
           SORBIDRAFT_01g034490 [Sorghum bicolor]
          Length = 164

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/62 (56%), Positives = 43/62 (69%)
 Frame = -1

Query: 211 ERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSC 32
           E  L+ +  V LG L+RVRGKIT    G +Q+ VRDV VE DPN E LHW+ C+RLA+ C
Sbjct: 94  EIALKMSEEVRLGTLLRVRGKITT-YRGAIQITVRDVVVEKDPNSEVLHWLQCVRLAKEC 152

Query: 31  YD 26
           YD
Sbjct: 153 YD 154


>ref|XP_004984280.1| PREDICTED: CST complex subunit STN1-like [Setaria italica]
          Length = 163

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)
 Frame = -1

Query: 211 ERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSC 32
           E  L+ +  V LG L+RVRGKI     G +Q+ VRDV +E DPN+E LHW+ C+RLA+ C
Sbjct: 93  EMALKMSEEVLLGTLLRVRGKIVM-YRGAIQIAVRDVVLEKDPNVEVLHWLQCVRLAKEC 151

Query: 31  YD 26
           YD
Sbjct: 152 YD 153


>ref|NP_001050181.1| Os03g0366900 [Oryza sativa Japonica Group]
           gi|108708339|gb|ABF96134.1| OB-fold nucleic acid binding
           domain containing protein, expressed [Oryza sativa
           Japonica Group] gi|113548652|dbj|BAF12095.1|
           Os03g0366900 [Oryza sativa Japonica Group]
           gi|215701028|dbj|BAG92452.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222624978|gb|EEE59110.1| hypothetical protein
           OsJ_10972 [Oryza sativa Japonica Group]
          Length = 160

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 32/62 (51%), Positives = 43/62 (69%)
 Frame = -1

Query: 211 ERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSC 32
           E  LR +  V LG L+RVRG+I     G +Q+ VRDV +E DPN+E +HW+ CIR+A+ C
Sbjct: 94  EMALRMSEVVSLGTLLRVRGRIVL-YRGAIQIAVRDVVLEKDPNVEVMHWLQCIRMAKEC 152

Query: 31  YD 26
           YD
Sbjct: 153 YD 154


>ref|XP_006345383.1| PREDICTED: CST complex subunit STN1-like [Solanum tuberosum]
          Length = 164

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 31/57 (54%), Positives = 44/57 (77%)
 Frame = -1

Query: 193 AATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSCYDR 23
           A+ ++LG + RVRGKI++   G LQ+ V DV +E DPN + LHW+DC+RLAR+CYD+
Sbjct: 102 ASQIQLGVIGRVRGKISR-YRGNLQITVSDVVIERDPNSQILHWLDCLRLARNCYDK 157


>ref|XP_004231127.1| PREDICTED: CST complex subunit STN1-like [Solanum lycopersicum]
          Length = 164

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 31/57 (54%), Positives = 43/57 (75%)
 Frame = -1

Query: 193 AATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSCYDR 23
           A+ V+LG + RVRGK++    G LQ+ V DV +E DPN + LHW+DC+RLAR+CYD+
Sbjct: 102 ASQVQLGVIARVRGKMSS-YRGNLQITVSDVVIERDPNSQILHWLDCLRLARNCYDK 157


>gb|ACN27497.1| unknown [Zea mays] gi|413955646|gb|AFW88295.1| OB-fold nucleic acid
           binding domain containing protein [Zea mays]
          Length = 165

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = -1

Query: 211 ERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSC 32
           E  L+ +  V LG L+RVRGKI     G +Q+ VRDV  E DPN E LHW+ C+RLA+ C
Sbjct: 95  EMALKMSEEVRLGTLLRVRGKIAS-YRGAIQITVRDVVPEKDPNSEVLHWLQCVRLAKEC 153

Query: 31  YD 26
           YD
Sbjct: 154 YD 155


>ref|XP_006650114.1| PREDICTED: CST complex subunit STN1-like [Oryza brachyantha]
          Length = 160

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/79 (40%), Positives = 48/79 (60%)
 Frame = -1

Query: 262 IDLTDRSHLGLAAEVETERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDP 83
           ++  D S     ++   E  L+ +  V LG L+RVRG+I     G +Q+ VRDV +E DP
Sbjct: 77  LNANDSSSRASDSDPTAEMALKMSELVSLGTLLRVRGRIVL-YRGAIQIAVRDVVLEKDP 135

Query: 82  NMEPLHWMDCIRLARSCYD 26
           N+E LHW+ C+ +A+ CYD
Sbjct: 136 NVEVLHWLQCVHMAKECYD 154


>ref|XP_002307601.1| OB-fold nucleic acid binding domain-containing family protein
           [Populus trichocarpa] gi|222857050|gb|EEE94597.1|
           OB-fold nucleic acid binding domain-containing family
           protein [Populus trichocarpa]
          Length = 166

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = -1

Query: 193 AATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSCYDRAA 17
           A+ +++G + RVRG+I  G  G +Q+ V DV VE DPN+E  HW+DCIRLAR+CY+  A
Sbjct: 105 ASEIKIGLVARVRGRIA-GYRGAVQVTVSDVVVERDPNVEAFHWLDCIRLARNCYNVVA 162


>gb|EMS53436.1| CST complex subunit STN1 [Triticum urartu]
          Length = 156

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -1

Query: 211 ERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSC 32
           E  L+ +  V LG L+RVRG+I     G +Q+  RDV +E+DPN+E LHW+ C+ +A+ C
Sbjct: 90  EMALKMSEVVRLGTLLRVRGRIVM-YRGAIQIAARDVVLEEDPNVEVLHWLQCVHMAKEC 148

Query: 31  YD 26
           YD
Sbjct: 149 YD 150


>gb|ADE77185.1| unknown [Picea sitchensis]
          Length = 185

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/72 (50%), Positives = 46/72 (63%)
 Frame = -1

Query: 232 LAAEVETERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDC 53
           L  E      L++A  V+LG+LVRV+G+IT   +  LQ+ V    VE DPN E LHWM+C
Sbjct: 99  LQMESMAAMALKQAEQVQLGRLVRVQGRITLYNKQ-LQITVSSAVVEKDPNAEILHWMEC 157

Query: 52  IRLARSCYDRAA 17
           IRLA  CYD +A
Sbjct: 158 IRLAVRCYDMSA 169


>gb|EMS59713.1| CST complex subunit STN1 [Triticum urartu]
          Length = 156

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = -1

Query: 211 ERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSC 32
           E   + +  V LG L+RVRG+I     G +Q+  RDV +E+DPNME LHW+ CI +A+ C
Sbjct: 90  EMASKMSEVVRLGTLLRVRGRIVM-YRGAIQIAARDVVLEEDPNMEVLHWLQCIHMAKEC 148

Query: 31  YD 26
           YD
Sbjct: 149 YD 150


>ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatula]
           gi|355513354|gb|AES94977.1| CST complex subunit STN1
           [Medicago truncatula]
          Length = 185

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/58 (50%), Positives = 44/58 (75%)
 Frame = -1

Query: 199 REAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSCYD 26
           R A  V++G + RVRG++T+  +GG+Q+ V DV  E DPN+E LHW++C+ LAR+CY+
Sbjct: 107 RSAEVVKVGNVARVRGRVTE-YKGGVQITVTDVISERDPNVEVLHWVECVNLARNCYN 163


>gb|EPS68315.1| hypothetical protein M569_06458, partial [Genlisea aurea]
          Length = 146

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/64 (50%), Positives = 44/64 (68%)
 Frame = -1

Query: 220 VETERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLA 41
           V+    L  A+  ELG +VRVRG+++ G  G +Q+ V DV  E DPN + LHW+DCI+LA
Sbjct: 84  VDARMSLEFASLTELGAVVRVRGRVS-GYRGTVQITVSDVTSEVDPNAQILHWLDCIKLA 142

Query: 40  RSCY 29
           R+CY
Sbjct: 143 RNCY 146


>gb|EEC75328.1| hypothetical protein OsI_11709 [Oryza sativa Indica Group]
          Length = 327

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/62 (50%), Positives = 42/62 (67%)
 Frame = -1

Query: 211 ERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSC 32
           E  LR +  V LG L+RVRG+I     G +Q+ VRDV +E DPN+E +HW+ CI +A+ C
Sbjct: 261 EMALRMSEVVSLGTLLRVRGRIVL-YHGAIQIAVRDVVLEKDPNVEVMHWLQCICMAKEC 319

Query: 31  YD 26
           YD
Sbjct: 320 YD 321


>gb|EXB93354.1| CST complex subunit STN1 [Morus notabilis]
          Length = 164

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/61 (54%), Positives = 42/61 (68%)
 Frame = -1

Query: 199 REAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSCYDRA 20
           R A+ V+LG + RVRG+IT      +Q+ V DV V+ DPN E LHW+DC+RLAR CYD  
Sbjct: 102 RFASEVKLGAVARVRGRITM-YRSEVQITVSDVVVDRDPNAEILHWLDCMRLARRCYDVV 160

Query: 19  A 17
           A
Sbjct: 161 A 161


>ref|XP_006444029.1| hypothetical protein CICLE_v10022619mg [Citrus clementina]
           gi|568852028|ref|XP_006479683.1| PREDICTED: CST complex
           subunit STN1-like [Citrus sinensis]
           gi|557546291|gb|ESR57269.1| hypothetical protein
           CICLE_v10022619mg [Citrus clementina]
          Length = 160

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/75 (48%), Positives = 48/75 (64%)
 Frame = -1

Query: 250 DRSHLGLAAEVETERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEP 71
           D S + L A V T+     AA +++G + RVRG+I     G +Q+ V DV +E DPNME 
Sbjct: 85  DPSTVRLIAGVATDF----AAKIKIGLVARVRGRIAS-YRGDVQITVSDVVIEKDPNMEV 139

Query: 70  LHWMDCIRLARSCYD 26
           LHW+DC+RLAR  YD
Sbjct: 140 LHWLDCLRLARKRYD 154


>gb|AFK40847.1| unknown [Medicago truncatula]
          Length = 179

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = -1

Query: 199 REAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSCYD 26
           R A   + G + RVRG++T+  +GG+Q+ V DV  E DPN+E LHW++C+ LAR+CY+
Sbjct: 107 RSAEVAKFGNVARVRGRVTE-YKGGVQITVTDVVSERDPNVEVLHWVECVNLARNCYN 163


>ref|NP_001151468.1| OB-fold nucleic acid binding domain containing protein [Zea mays]
           gi|195646980|gb|ACG42958.1| OB-fold nucleic acid binding
           domain containing protein [Zea mays]
          Length = 164

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/62 (51%), Positives = 42/62 (67%)
 Frame = -1

Query: 211 ERVLREAATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSC 32
           E  L+ +  V LG L+RVRGKI     G +Q+ VRDV V +DPN + LHW+ C+RLA+ C
Sbjct: 95  EMALKMSEEVRLGTLLRVRGKIAS-YRGAIQITVRDV-VPNDPNSDVLHWLQCVRLAKEC 152

Query: 31  YD 26
           YD
Sbjct: 153 YD 154


>ref|XP_004145384.1| PREDICTED: CST complex subunit STN1-like [Cucumis sativus]
           gi|449474220|ref|XP_004154109.1| PREDICTED: CST complex
           subunit STN1-like [Cucumis sativus]
           gi|449526303|ref|XP_004170153.1| PREDICTED: CST complex
           subunit STN1-like [Cucumis sativus]
          Length = 168

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = -1

Query: 193 AATVELGKLVRVRGKITQGEEGGLQLKVRDVGVEDDPNMEPLHWMDCIRLARSCYDRAAH 14
           AA + +G +VRVRGK++    G +Q+ V DV VEDDPN E LHW+D +RLA  CYD +  
Sbjct: 108 AAQIRVGIVVRVRGKLSS-YRGMVQITVSDVVVEDDPNAEILHWLDSMRLAMKCYDLSPT 166

Query: 13  P 11
           P
Sbjct: 167 P 167


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