BLASTX nr result
ID: Zingiber24_contig00051237
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00051237
(264 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004970337.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|XP_006646425.1| PREDICTED: putative pentatricopeptide repeat... 110 1e-22
tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea m... 110 1e-22
ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea ma... 110 1e-22
ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [S... 109 4e-22
emb|CBI29860.3| unnamed protein product [Vitis vinifera] 108 7e-22
ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi... 108 7e-22
ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group] g... 107 2e-21
gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indi... 107 2e-21
gb|EMT17107.1| hypothetical protein F775_21224 [Aegilops tauschii] 105 5e-21
ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containi... 105 6e-21
gb|EMS68385.1| hypothetical protein TRIUR3_05270 [Triticum urartu] 103 2e-20
gb|EOY09292.1| Pentatricopeptide repeat superfamily protein [The... 100 2e-19
gb|EXB93624.1| hypothetical protein L484_018009 [Morus notabilis] 99 6e-19
ref|XP_002268090.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
emb|CAN61058.1| hypothetical protein VITISV_011618 [Vitis vinifera] 90 3e-16
ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago t... 89 8e-16
gb|EPS60114.1| hypothetical protein M569_14690 [Genlisea aurea] 88 1e-15
ref|XP_006493241.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
>ref|XP_004970337.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Setaria italica]
Length = 596
Score = 112 bits (279), Expect = 7e-23
Identities = 54/87 (62%), Positives = 71/87 (81%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCR+G +++A+SFV MPI PNSVIWRT+L K++ D +VE+A++KLLE+ PLN
Sbjct: 369 DLLCRSGLLDDAYSFVIGMPISPNSVIWRTVLVASKSSNRID-IVESASKKLLELEPLNP 427
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNLYA+ +WD+VS MR+KMK
Sbjct: 428 ENYVLLSNLYASNSQWDRVSYMRKKMK 454
>ref|XP_006646425.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Oryza brachyantha]
Length = 593
Score = 110 bits (276), Expect = 1e-22
Identities = 54/87 (62%), Positives = 67/87 (77%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DL CR+G ++EA+SFV M I PNSVIWRTLL KN+ SD +VE+A+++LLE+ P N
Sbjct: 366 DLFCRSGLLDEAYSFVTSMAIPPNSVIWRTLLVASKNSNRSD-IVESASKRLLELEPCNP 424
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNLYA +WD VS MR+KMK
Sbjct: 425 ENYVLLSNLYALNSQWDSVSNMRKKMK 451
>tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 110 bits (276), Expect = 1e-22
Identities = 52/87 (59%), Positives = 69/87 (79%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCR+G +++A+SFV MP+ PNSVIWRTLL CK++ D + E+A ++LLE+ P N
Sbjct: 421 DLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRID-IAESATKRLLELEPHNP 479
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNLYA+ +WD+VS +RRKMK
Sbjct: 480 ENYVLLSNLYASNSQWDRVSYLRRKMK 506
>ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 110 bits (276), Expect = 1e-22
Identities = 52/87 (59%), Positives = 69/87 (79%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCR+G +++A+SFV MP+ PNSVIWRTLL CK++ D + E+A ++LLE+ P N
Sbjct: 372 DLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRID-IAESATKRLLELEPHNP 430
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNLYA+ +WD+VS +RRKMK
Sbjct: 431 ENYVLLSNLYASNSQWDRVSYLRRKMK 457
>ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein
SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 109 bits (272), Expect = 4e-22
Identities = 51/87 (58%), Positives = 70/87 (80%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCR+G +++A+SFV DMPI PNS+IWRTLL CK++ D + E+A+++LLE+ P N
Sbjct: 372 DLLCRSGLLDDAYSFVIDMPISPNSIIWRTLLVACKSSNRID-IAESASKRLLELEPHNP 430
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNL A+ +WD+VS +R+KMK
Sbjct: 431 ENYVLLSNLCASNSQWDRVSYLRKKMK 457
>emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 108 bits (270), Expect = 7e-22
Identities = 52/87 (59%), Positives = 68/87 (78%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCRA VE+A + V+ MPI PN VIWRTLL GCK ++ D+ E A++LLE+ P NA
Sbjct: 406 DLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKS-EVVAQRLLELEPHNA 464
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENY+LLSNLYA+ +W+K+SQ+R+KMK
Sbjct: 465 ENYILLSNLYASMSQWEKMSQVRKKMK 491
>ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 108 bits (270), Expect = 7e-22
Identities = 52/87 (59%), Positives = 68/87 (78%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCRA VE+A + V+ MPI PN VIWRTLL GCK ++ D+ E A++LLE+ P NA
Sbjct: 337 DLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKS-EVVAQRLLELEPHNA 395
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENY+LLSNLYA+ +W+K+SQ+R+KMK
Sbjct: 396 ENYILLSNLYASMSQWEKMSQVRKKMK 422
>ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding
protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing
protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa
Japonica Group]
Length = 604
Score = 107 bits (266), Expect = 2e-21
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DL CR+ ++EA+SFV M I PNSVIWRTLL KN+ D +V++A++KLLE+ P N
Sbjct: 377 DLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFD-IVQSASKKLLELEPCNP 435
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNLYA+ +WD+VS MR+KMK
Sbjct: 436 ENYVLLSNLYASNSQWDRVSYMRKKMK 462
>gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 107 bits (266), Expect = 2e-21
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DL CR+ ++EA+SFV M I PNSVIWRTLL KN+ D +V++A++KLLE+ P N
Sbjct: 374 DLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFD-IVQSASKKLLELEPCNP 432
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNLYA+ +WD+VS MR+KMK
Sbjct: 433 ENYVLLSNLYASNSQWDRVSYMRKKMK 459
>gb|EMT17107.1| hypothetical protein F775_21224 [Aegilops tauschii]
Length = 504
Score = 105 bits (263), Expect = 5e-21
Identities = 51/87 (58%), Positives = 66/87 (75%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCR+G ++EA+SFV MPI+PNSVIWR LL K++ +D +V A++KL E+ P N
Sbjct: 261 DLLCRSGLLDEAYSFVTSMPILPNSVIWRNLLVASKSSNRTD-IVGLASKKLFELEPQNP 319
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNLYA +WD+V MR+KMK
Sbjct: 320 ENYVLLSNLYALNSQWDRVRYMRKKMK 346
>ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 105 bits (262), Expect = 6e-21
Identities = 52/87 (59%), Positives = 64/87 (73%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCR+G ++EAFSFV MPI PNSVIWR LL K++ D +VE A+ +L E+ P N
Sbjct: 373 DLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASKSSNRID-IVELASRRLFELEPQNP 431
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNLYA +WD+V MR+KMK
Sbjct: 432 ENYVLLSNLYALNSQWDRVRYMRKKMK 458
>gb|EMS68385.1| hypothetical protein TRIUR3_05270 [Triticum urartu]
Length = 305
Score = 103 bits (258), Expect = 2e-20
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCR+G ++EA+SFV MPI+PNSVIWR LL +++ +D +V A++KL E+ P N
Sbjct: 50 DLLCRSGLLDEAYSFVTGMPILPNSVIWRNLLVASQSSNRTD-IVGLASKKLFELEPRNP 108
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLSNLYA +WD+V MR+KMK
Sbjct: 109 ENYVLLSNLYALNSQWDRVRYMRKKMK 135
>gb|EOY09292.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 502
Score = 100 bits (250), Expect = 2e-19
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCRA V EA++FV+ MP PN+VIWRTLL GC+ + + E AAE+LL + PLN
Sbjct: 275 DLLCRASLVGEAYNFVQTMPFSPNAVIWRTLLVGCQKNKMLHKG-EIAAEQLLALEPLNT 333
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENY+LLSNLYA+ +W+K+S +R+ MK
Sbjct: 334 ENYILLSNLYASVSQWEKMSHVRKMMK 360
>gb|EXB93624.1| hypothetical protein L484_018009 [Morus notabilis]
Length = 564
Score = 99.0 bits (245), Expect = 6e-19
Identities = 51/87 (58%), Positives = 64/87 (73%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCRAG VEEA + V++M I PN VIWR LL GC +R + E AE+LLE+ PLNA
Sbjct: 337 DLLCRAGLVEEAHTLVQNMAISPNPVIWRKLLMGCNKSRMLERG-ELIAERLLELEPLNA 395
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVLLS+LYA+ +W+K+ +R KMK
Sbjct: 396 ENYVLLSSLYASVSQWEKMMLVRAKMK 422
>ref|XP_002268090.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 529
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/86 (48%), Positives = 62/86 (72%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
D+LCRAG V+EAF FV++MPI P+ ++WRTLL C +T+ + + L E+GP +
Sbjct: 427 DILCRAGLVDEAFKFVQNMPIKPDMIVWRTLLGAC-HTQGNISLANQVMNYLCELGPKKS 485
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKM 261
E+YVLLSNL+A+ EWD V ++R++M
Sbjct: 486 EDYVLLSNLFASNAEWDNVGEVRKEM 511
>ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 92.0 bits (227), Expect = 7e-17
Identities = 43/87 (49%), Positives = 62/87 (71%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
DLLCR+G VEEA+ M I PN+ WR+LL GCK + + + E A LLE+ PLNA
Sbjct: 337 DLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLN-LGEIVARYLLELEPLNA 395
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENY+++SNLY++ +W+K+S++R+ MK
Sbjct: 396 ENYIMISNLYSSLSQWEKMSELRKVMK 422
>emb|CAN61058.1| hypothetical protein VITISV_011618 [Vitis vinifera]
Length = 529
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/86 (47%), Positives = 60/86 (69%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
D+LCRAG V+EAF FV++MPI P+ ++WRTLL C + + + L E+GP +
Sbjct: 427 DILCRAGLVDEAFKFVQNMPIKPDMIVWRTLLGAC-XXQGNISLANQVMNXLCELGPKKS 485
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKM 261
E+YVLLSNL+A+ EWD V ++R++M
Sbjct: 486 EDYVLLSNLFASNAEWDNVXEVRKEM 511
>ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 975
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
D+L RAG + EA V ++P P+S IW +LL+ C+N R D + E A KLLE+GP A
Sbjct: 748 DMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLD-IGEKVANKLLELGPDKA 806
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKMK 264
ENYVL+SN YA +WD+V +MR++MK
Sbjct: 807 ENYVLISNFYARLGKWDEVRKMRQRMK 833
>gb|EPS60114.1| hypothetical protein M569_14690 [Genlisea aurea]
Length = 562
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/86 (50%), Positives = 56/86 (65%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTRTSDEVVETAAEKLLEMGPLNA 183
D+ CRA VEEA FV MP PN IWRTLL CK + E A++L++M PLNA
Sbjct: 335 DMFCRANLVEEACDFVNSMPFSPNPAIWRTLLVSCKRNKLLQR-GEIVAKQLIQMEPLNA 393
Query: 184 ENYVLLSNLYATRCEWDKVSQMRRKM 261
ENY+LLS+LY + +W K+S +R+ M
Sbjct: 394 ENYILLSSLYGSVSDWVKMSHVRKLM 419
>ref|XP_006493241.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
Length = 519
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/89 (43%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Frame = +1
Query: 4 DLLCRAGHVEEAFSFVKDMPIVPNSVIWRTLLAGCKNTR--TSDEVVETAAEKLLEMGPL 177
DLLCRA ++EA+ +++MP+ PN+V+W +LL C + + E+ E A E+L+++ P
Sbjct: 375 DLLCRARLLDEAYEVIRNMPMEPNAVLWGSLLTACASADDGANVELAEIAMERLIKLEPF 434
Query: 178 NAENYVLLSNLYATRCEWDKVSQMRRKMK 264
N NYVL+SN+YA + +WD +MRR MK
Sbjct: 435 NDGNYVLMSNIYAAKAQWDDAGKMRRLMK 463