BLASTX nr result
ID: Zingiber24_contig00051193
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00051193
(471 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [S... 80 2e-13
ref|XP_006660042.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea m... 72 6e-11
ref|XP_004986208.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
gb|AEW07735.1| hypothetical protein 0_10195_01, partial [Pinus r... 58 1e-06
gb|AFG65224.1| hypothetical protein 0_10195_01, partial [Pinus t... 57 2e-06
gb|AFG65219.1| hypothetical protein 0_10195_01, partial [Pinus t... 57 3e-06
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr... 57 3e-06
gb|AFG65217.1| hypothetical protein 0_10195_01, partial [Pinus t... 57 3e-06
gb|AEW07736.1| hypothetical protein 0_10195_01, partial [Pinus l... 57 3e-06
gb|ESW26897.1| hypothetical protein PHAVU_003G157500g [Phaseolus... 56 4e-06
gb|EMJ04813.1| hypothetical protein PRUPE_ppa002292mg [Prunus pe... 56 4e-06
gb|AFG65230.1| hypothetical protein 0_10195_01, partial [Pinus t... 56 6e-06
ref|XP_006353048.1| PREDICTED: pentatricopeptide repeat-containi... 55 7e-06
gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japo... 55 7e-06
ref|NP_001078414.1| pentatricopeptide repeat-containing protein ... 55 7e-06
ref|NP_001078415.1| pentatricopeptide repeat-containing protein ... 55 7e-06
emb|CAB45902.1| putative protein (fragment) [Arabidopsis thalian... 55 7e-06
emb|CAA17526.1| putative protein (fragment) [Arabidopsis thaliana] 55 7e-06
>ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [Sorghum bicolor]
gi|241930143|gb|EES03288.1| hypothetical protein
SORBIDRAFT_03g028130 [Sorghum bicolor]
Length = 694
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
+ KCPG+SW+EVG EVHRFLTADKLH Q IY L GLT+QL DEGY P ++
Sbjct: 634 IKKCPGYSWIEVGDSEVHRFLTADKLHTQSHQIYRVLGGLTQQLMDEGYEPKID 687
>ref|XP_006660042.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Oryza brachyantha]
Length = 700
Score = 74.3 bits (181), Expect = 2e-11
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGY 147
+ KC G+SW+E+G EVHRFLT D+LHEQ D IY L GLT+Q+ DEGY
Sbjct: 650 IRKCAGYSWIEIGNGEVHRFLTGDQLHEQRDHIYEVLGGLTRQMMDEGY 698
>tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea mays]
Length = 696
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/49 (67%), Positives = 36/49 (73%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGY 147
V KCPG+SW+E EVHRFLTADKLH Q IY L GLT+QL DEGY
Sbjct: 638 VKKCPGYSWIEGRDSEVHRFLTADKLHSQSHQIYEVLGGLTEQLMDEGY 686
>ref|XP_004986208.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Setaria italica]
Length = 875
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVP---LVNPKG 171
V K PG+SWV+V H F+ ADK H +DIY++L L ++L++EGYVP L +P
Sbjct: 779 VQKIPGYSWVDVNNSS-HLFVAADKSHPDSEDIYMSLKSLLQELREEGYVPRPELCHPMH 837
Query: 172 PLS*MKNKHKV 204
P + + H V
Sbjct: 838 PNNSTQEGHFV 848
>ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYV 150
V K PG SW+EV G EVH F++ DK+H++ D IYLALD LT Q+KD G V
Sbjct: 779 VVKEPGQSWIEVNG-EVHIFVSRDKVHDETDLIYLALDELTTQMKDVGCV 827
>gb|AEW07735.1| hypothetical protein 0_10195_01, partial [Pinus radiata]
gi|383164845|gb|AFG65218.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164849|gb|AFG65220.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164851|gb|AFG65221.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164853|gb|AFG65222.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164855|gb|AFG65223.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164859|gb|AFG65225.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164861|gb|AFG65226.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164863|gb|AFG65227.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164865|gb|AFG65228.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164867|gb|AFG65229.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
Length = 136
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
+ K PG+SW+EV R VH F+ D+ H Q ++IY L+ LT+Q+K+ GY+P N
Sbjct: 11 IQKKPGYSWIEVKNR-VHSFMVNDRSHPQTEEIYTTLESLTEQIKEVGYMPDTN 63
>gb|AFG65224.1| hypothetical protein 0_10195_01, partial [Pinus taeda]
Length = 136
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
+ K PG+SW+EV R VH F+ D+ H Q ++IY L+ LT+Q+K+ GY+P N
Sbjct: 11 IQKKPGYSWIEVKNR-VHSFMVNDRSHPQTEEIYKTLESLTEQIKEVGYMPDTN 63
>gb|AFG65219.1| hypothetical protein 0_10195_01, partial [Pinus taeda]
gi|383164871|gb|AFG65231.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164873|gb|AFG65232.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
gi|383164875|gb|AFG65233.1| hypothetical protein
0_10195_01, partial [Pinus taeda]
Length = 136
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
+ K PG+SW+EV R VH F+ D+ H Q +IY L+ LT+Q+K+ GY+P N
Sbjct: 11 IQKKPGYSWIEVKNR-VHSFMVNDRSHPQTQEIYTTLESLTEQIKEVGYMPDTN 63
>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVP 153
V K PG SW+EV G EVH F+ D+ H + ++IY L+ LTKQ+K GYVP
Sbjct: 682 VKKEPGRSWIEVAG-EVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVP 731
>gb|AFG65217.1| hypothetical protein 0_10195_01, partial [Pinus taeda]
Length = 136
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
+ K PG+SW+EV + VH F+ D+ H Q ++IY L+ LT+Q+K+ GY+P N
Sbjct: 11 IQKKPGYSWIEVKNK-VHSFMVNDRSHPQTEEIYTTLESLTEQIKEVGYMPDTN 63
>gb|AEW07736.1| hypothetical protein 0_10195_01, partial [Pinus lambertiana]
Length = 136
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
+ K PG+SW+EV R VH F+ D+ H Q +IY L+ LT+Q+K+ GY P N
Sbjct: 11 IQKKPGYSWIEVKNR-VHSFMVNDRSHPQTQEIYTTLESLTEQIKEVGYTPDTN 63
>gb|ESW26897.1| hypothetical protein PHAVU_003G157500g [Phaseolus vulgaris]
Length = 732
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVNPKGP 174
V K PG SW+E+ H F+ D +H Q D+I LAL LTK +KDEGY PL++P P
Sbjct: 652 VTKEPGCSWIELKSL-THVFVVGDNMHPQIDEIRLALKLLTKVMKDEGYQPLLDPLLP 708
>gb|EMJ04813.1| hypothetical protein PRUPE_ppa002292mg [Prunus persica]
Length = 691
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
V K PG SW+E+ REVH FL DK H + D+I+ L L+K++K+EGYVP N
Sbjct: 553 VIKKPGLSWIEIK-REVHVFLVGDKSHLRYDEIHFFLHELSKRMKEEGYVPDTN 605
>gb|AFG65230.1| hypothetical protein 0_10195_01, partial [Pinus taeda]
Length = 136
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
+ K PG+SW+EV R VH F+ D+ H Q ++IY L+ L +Q+K+ GY+P N
Sbjct: 11 IQKKPGYSWIEVKNR-VHSFMVNDRSHPQTEEIYTTLESLAEQIKEVGYMPDTN 63
>ref|XP_006353048.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Solanum tuberosum]
Length = 852
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
V K PG+SW EV H F+ AD H Q IYL LD L +L++EGYVP +N
Sbjct: 789 VQKVPGYSWTEVNN-STHIFVAADASHPQSAQIYLLLDNLLMELQNEGYVPQMN 841
>gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPL 156
V K PG+SWV+V H F+ ADK H +DIY++L + +L++EGY+P+
Sbjct: 784 VQKIPGYSWVDVNNTS-HLFVAADKSHPDSEDIYMSLKSILLELREEGYIPM 834
>ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g21065 gi|332658994|gb|AEE84394.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
V K PG S VEVG R VH FL DK H Q D IY L +T +L+ EGYVP ++
Sbjct: 457 VKKVPGHSLVEVGNR-VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQIS 509
>ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
V K PG S VEVG R VH FL DK H Q D IY L +T +L+ EGYVP ++
Sbjct: 324 VKKVPGHSLVEVGNR-VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQIS 376
>emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment)
[Arabidopsis thaliana]
Length = 1495
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
V K PG S VEVG R VH FL DK H Q D IY L +T +L+ EGYVP ++
Sbjct: 457 VKKVPGHSLVEVGNR-VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQIS 509
>emb|CAA17526.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1331
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +1
Query: 1 VNKCPGFSWVEVGGREVHRFLTADKLHEQCDDIYLALDGLTKQLKDEGYVPLVN 162
V K PG S VEVG R VH FL DK H Q D IY L +T +L+ EGYVP ++
Sbjct: 240 VKKVPGHSLVEVGNR-VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQIS 292