BLASTX nr result

ID: Zingiber24_contig00051041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00051041
         (373 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41235.1| unknown [Medicago truncatula]                           57   2e-06
ref|XP_004139938.1| PREDICTED: expansin-B3-like [Cucumis sativus]      56   6e-06
gb|EOX99395.1| Expansin B1, BETA 1.5 isoform 2, partial [Theobro...    55   1e-05
gb|EOX99394.1| Expansin B3, BETA 1.6 isoform 1 [Theobroma cacao]       55   1e-05

>gb|AFK41235.1| unknown [Medicago truncatula]
          Length = 181

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 29/52 (55%)
 Frame = +1

Query: 217 HPPFDLQWYPATATWXXXXXXXXXXXXXXXXXTLVDVRPLRARVGAVSPVLF 372
           H   DL WYP TATW                 TLVDV+PLRARVGAV PVLF
Sbjct: 34  HHTLDLHWYPGTATWYGDPEGDGSIGGACGYGTLVDVKPLRARVGAVGPVLF 85


>ref|XP_004139938.1| PREDICTED: expansin-B3-like [Cucumis sativus]
          Length = 269

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/52 (53%), Positives = 30/52 (57%)
 Frame = +1

Query: 217 HPPFDLQWYPATATWXXXXXXXXXXXXXXXXXTLVDVRPLRARVGAVSPVLF 372
           HP  DL W PATATW                  LVDV+PL+ARVGAVSPVLF
Sbjct: 34  HPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLF 85


>gb|EOX99395.1| Expansin B1, BETA 1.5 isoform 2, partial [Theobroma cacao]
          Length = 243

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/48 (56%), Positives = 30/48 (62%)
 Frame = +1

Query: 229 DLQWYPATATWXXXXXXXXXXXXXXXXXTLVDVRPLRARVGAVSPVLF 372
           DL W+PATATW                 +LVDV+PLRARVGAVSPVLF
Sbjct: 57  DLHWHPATATWYGSPDGDGSDGGACGYGSLVDVKPLRARVGAVSPVLF 104


>gb|EOX99394.1| Expansin B3, BETA 1.6 isoform 1 [Theobroma cacao]
          Length = 266

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/48 (56%), Positives = 30/48 (62%)
 Frame = +1

Query: 229 DLQWYPATATWXXXXXXXXXXXXXXXXXTLVDVRPLRARVGAVSPVLF 372
           DL W+PATATW                 +LVDV+PLRARVGAVSPVLF
Sbjct: 36  DLHWHPATATWYGSPDGDGSDGGACGYGSLVDVKPLRARVGAVSPVLF 83


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