BLASTX nr result
ID: Zingiber24_contig00050789
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00050789
(334 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315453.1| hypothetical protein POPTR_0010s24160g [Popu... 75 7e-12
ref|XP_002311039.1| hypothetical protein POPTR_0008s02560g [Popu... 75 9e-12
gb|EOY19196.1| RING/U-box superfamily protein isoform 1 [Theobro... 73 4e-11
ref|XP_003578912.1| PREDICTED: RING-H2 finger protein ATL11-like... 71 2e-10
gb|EXC25403.1| RING-H2 finger protein ATL32 [Morus notabilis] 70 2e-10
gb|EMJ21612.1| hypothetical protein PRUPE_ppa011047mg [Prunus pe... 70 3e-10
ref|XP_004307041.1| PREDICTED: RING-H2 finger protein ATL32-like... 68 1e-09
ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like ... 68 1e-09
ref|XP_006436670.1| hypothetical protein CICLE_v10032672mg [Citr... 66 4e-09
ref|XP_006664342.1| PREDICTED: E3 ubiquitin-protein ligase ATL9-... 66 5e-09
ref|XP_006851574.1| hypothetical protein AMTR_s00040p00197990 [A... 65 7e-09
ref|XP_004977537.1| PREDICTED: E3 ubiquitin-protein ligase EL5-l... 65 7e-09
ref|XP_004239719.1| PREDICTED: RING-H2 finger protein ATL28-like... 65 7e-09
ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL32-like... 65 7e-09
ref|XP_002450274.1| hypothetical protein SORBIDRAFT_05g003050 [S... 65 7e-09
ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like... 65 9e-09
gb|EAY79962.1| hypothetical protein OsI_35125 [Oryza sativa Indi... 64 2e-08
ref|XP_006345857.1| PREDICTED: RING-H2 finger protein ATL28-like... 64 3e-08
gb|ABA95805.1| Zinc finger, C3HC4 type family protein, expressed... 64 3e-08
gb|EEE52775.1| hypothetical protein OsJ_35228 [Oryza sativa Japo... 64 3e-08
>ref|XP_002315453.1| hypothetical protein POPTR_0010s24160g [Populus trichocarpa]
gi|222864493|gb|EEF01624.1| hypothetical protein
POPTR_0010s24160g [Populus trichocarpa]
Length = 227
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRD-SLIESSM*PLYCPTARSFSPSKT 156
+LRILP+C H+FHV C+D+WL+QHST P CRISLR+ + +M PL+ RS ++T
Sbjct: 99 ILRILPYCGHSFHVTCIDMWLQQHSTCPMCRISLREFPEKKCAMQPLFSSAIRSQYGTET 158
Query: 155 FVSDPCQFQFSDSGFSVSRRNPDS 84
F D + + +G +S+R+ DS
Sbjct: 159 F--DSHSYNYLLTGHGISQRSDDS 180
>ref|XP_002311039.1| hypothetical protein POPTR_0008s02560g [Populus trichocarpa]
gi|222850859|gb|EEE88406.1| hypothetical protein
POPTR_0008s02560g [Populus trichocarpa]
Length = 226
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIESS-M*PLYCPTARSFSPSKT 156
+LRILP+C H+FHV C+DIWL+QHST P CRISLR+ + M PL+ RS + ++T
Sbjct: 97 ILRILPYCGHSFHVTCIDIWLQQHSTCPVCRISLREFPEKKRVMQPLFSSAIRSRNGTET 156
Query: 155 FVSDPCQFQFSDSGFS 108
F S + ++ G S
Sbjct: 157 FDSHSYNYMLTEHGIS 172
>gb|EOY19196.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
gi|508727300|gb|EOY19197.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
Length = 228
Score = 72.8 bits (177), Expect = 4e-11
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIESS-M*PLYCPTARSFSPSKT 156
VLRILP+C H+FH+ C+DIWL+QHST P CR+SLR+ + M PL+ RS ++
Sbjct: 99 VLRILPYCGHSFHITCIDIWLQQHSTCPVCRMSLREFPEKKRLMQPLFSSAIRSHFGMES 158
Query: 155 FVSDPCQFQFSDSGFSVSRRNPDSILLRGSVSAIINNTFGPAG 27
F + C GF P G + I N+F G
Sbjct: 159 FNTHSCNCLLRGHGF------PSRAHDNGGMGPIQENSFASGG 195
>ref|XP_003578912.1| PREDICTED: RING-H2 finger protein ATL11-like [Brachypodium
distachyon]
Length = 245
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/96 (42%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRD---------SLIESSM*PLYCPTA 180
+LR LP+C H FHV C+D+WLKQH+T P CRISL D L ++M P Y P A
Sbjct: 124 LLRTLPYCGHNFHVACIDVWLKQHTTCPVCRISLSDYPDSKHTVPPLPSAAMTPPYSPEA 183
Query: 179 RSFSPSKTFVSDPCQFQFSDSGFS-----VSRRNPD 87
SDPC F +G S V R PD
Sbjct: 184 SR--------SDPCHCLFVGTGHSARSSDVLRNEPD 211
>gb|EXC25403.1| RING-H2 finger protein ATL32 [Morus notabilis]
Length = 226
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIESS-M*PLYCPTARSFSPSKT 156
VLRILP+C H+FHV C+DIWL+QHST P CR+SLR+ M PL+ RS ++
Sbjct: 99 VLRILPYCGHSFHVTCIDIWLQQHSTCPICRMSLRECPDRKRLMQPLFSSAIRSRYGPES 158
Query: 155 FVSDPCQF 132
S+ CQ+
Sbjct: 159 LDSNSCQY 166
>gb|EMJ21612.1| hypothetical protein PRUPE_ppa011047mg [Prunus persica]
Length = 226
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRD-SLIESSM*PLYCPTARSFSPSKT 156
VLRILP+C H+FHV C+DIWL+QHST P CRISLR+ + M PL+ RS ++
Sbjct: 99 VLRILPYCGHSFHVTCIDIWLQQHSTCPVCRISLREFPERKRRMQPLFSSAIRSHYGRES 158
Query: 155 FVSDPCQFQFSDSG 114
F + ++ ++ G
Sbjct: 159 FNTHSYRYMLNNRG 172
>ref|XP_004307041.1| PREDICTED: RING-H2 finger protein ATL32-like [Fragaria vesca subsp.
vesca]
Length = 226
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRD-SLIESSM*PLYCPTARSFSPSKT 156
VLRILP+C H+FHV C+DIWL QHST P CRISLR+ + + PL+ RS +++
Sbjct: 99 VLRILPYCGHSFHVTCIDIWLHQHSTCPVCRISLRELPERKRRLQPLFSSAIRSHYGTES 158
Query: 155 FVSDPCQFQFSDSGFSVSRRNP 90
F ++ ++ G S + NP
Sbjct: 159 FDIHSYRYPLNNHG-SRTHANP 179
>ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like [Cucumis sativus]
gi|449528792|ref|XP_004171387.1| PREDICTED: RING-H2
finger protein ATL7-like [Cucumis sativus]
Length = 218
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIES-SM*PLYCPTARSFSPSKT 156
+LRILP+C H+FHV C+DIWL QHST P CR+SLR+ + +M PL+ R+ +
Sbjct: 99 LLRILPYCGHSFHVNCIDIWLHQHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALN---- 154
Query: 155 FVSDPCQ 135
SDPC+
Sbjct: 155 --SDPCR 159
>ref|XP_006436670.1| hypothetical protein CICLE_v10032672mg [Citrus clementina]
gi|568878415|ref|XP_006492189.1| PREDICTED: RING-H2
finger protein ATL38-like [Citrus sinensis]
gi|557538866|gb|ESR49910.1| hypothetical protein
CICLE_v10032672mg [Citrus clementina]
Length = 227
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Frame = -3
Query: 329 LRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIESS--M*PLYCPTARSFSPSKT 156
LRILP+C H+FH C+DIWL QHST P CR+SLR+ L E M P++ RS ++
Sbjct: 100 LRILPYCGHSFHATCIDIWLHQHSTCPVCRVSLRE-LPERKRLMQPMFSSAIRSHYGIES 158
Query: 155 FVSDPCQFQFSDSGFS---VSRRNPDSI 81
F + + S GFS V R DS+
Sbjct: 159 FDTHSYNY-LSGHGFSSRTVGNRGMDSV 185
>ref|XP_006664342.1| PREDICTED: E3 ubiquitin-protein ligase ATL9-like [Oryza
brachyantha]
Length = 181
Score = 65.9 bits (159), Expect = 5e-09
Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRD-SLIESSM*PLYCPTARSFSP--S 162
VLR+LP+C H FHV C+DIWL HST P CRISL D + +M PL P+A P
Sbjct: 66 VLRVLPYCGHGFHVACIDIWLMHHSTCPVCRISLGDYPDSKQTMSPL--PSAAIIPPCSP 123
Query: 161 KTFVSDPCQFQFSDSGFS-----VSRRNPD 87
+ SD C F +G S V R PD
Sbjct: 124 EASRSDQCNCLFVSTGHSPRTSQVVRNEPD 153
>ref|XP_006851574.1| hypothetical protein AMTR_s00040p00197990 [Amborella trichopoda]
gi|548855268|gb|ERN13155.1| hypothetical protein
AMTR_s00040p00197990 [Amborella trichopoda]
Length = 275
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = -3
Query: 329 LRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDS 222
LRILP+C H FHV C+D WL+QHST P CRISLRDS
Sbjct: 100 LRILPYCGHAFHVSCIDTWLQQHSTCPVCRISLRDS 135
>ref|XP_004977537.1| PREDICTED: E3 ubiquitin-protein ligase EL5-like [Setaria italica]
Length = 257
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSL---IESSM*PLYCPTARSFSPS 162
VLR LP+C H FH+ C+D+WL+Q+ST P CRISL D+ + + PL+ S
Sbjct: 121 VLRTLPYCGHDFHMACIDLWLEQNSTCPVCRISLLDNPDTDSDHTTPPLHSIVISPPSSP 180
Query: 161 KTFVSDPCQFQFSDSGFS-----VSRRNPD 87
++ SDPC+ F +G S R PD
Sbjct: 181 ESSRSDPCRCLFVSAGHSSRASEAPRHEPD 210
>ref|XP_004239719.1| PREDICTED: RING-H2 finger protein ATL28-like [Solanum lycopersicum]
Length = 193
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = -3
Query: 329 LRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIESS-M*PLYCPTARSFSPSKTF 153
LRILP C H FH C+DIW +QHST P CRISLR++ + + PL+ RS T
Sbjct: 100 LRILPLCGHYFHATCIDIWFQQHSTCPVCRISLRETAEKKCFLQPLFSSAVRSQYTMDTL 159
Query: 152 VSDPCQFQFSDSGFSVSRRNPDSILLRGSVSAIIN 48
+ Q S SG +S R+ D+ S ++ N
Sbjct: 160 --NVNSNQCSSSGLRLSSRSHDNQTTNPSTASASN 192
>ref|XP_003556277.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max]
Length = 229
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRD-SLIESSM*PLYCPTARSFSPSKT 156
+LRILP+C H+FHV C+D+WL+Q+ST P CRISLR+ + M PL+ + ++
Sbjct: 99 MLRILPYCGHSFHVTCIDLWLQQNSTCPVCRISLREFPERKLLMQPLFSSALQPHYGIES 158
Query: 155 FVSDPCQFQFSDSGFSVSRRNPDSI 81
F + +D+G +S R PD++
Sbjct: 159 FDTHHYHCMMADNG--LSSRTPDNL 181
>ref|XP_002450274.1| hypothetical protein SORBIDRAFT_05g003050 [Sorghum bicolor]
gi|241936117|gb|EES09262.1| hypothetical protein
SORBIDRAFT_05g003050 [Sorghum bicolor]
Length = 235
Score = 65.5 bits (158), Expect = 7e-09
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 12/105 (11%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRIS-LRDSLIESSM*PLYCPTARSFSPSKT 156
VLR+LP C H FH+ C+D+WL+Q+ST P CR+S L + E + P P+ SP +
Sbjct: 106 VLRVLPHCGHDFHMACIDLWLEQNSTCPVCRVSLLHNPDSEHTAPPPPLPSVVVISPPSS 165
Query: 155 ---FVSDPCQFQFSDSGFS-----VSRRNPD---SILLRGSVSAI 54
SDPC+ F+ +G S +R PD + R SV ++
Sbjct: 166 PEPSASDPCRCLFAGTGHSSRASEATRNEPDQENQVASRSSVDSM 210
>ref|XP_003535500.1| PREDICTED: RING-H2 finger protein ATL32-like [Glycine max]
Length = 229
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIESS-M*PLYCPTARSFSPSKT 156
+LRILP+C H+FHV C+D+WL+Q+ST P CRISLR+ M PL+ + ++
Sbjct: 99 MLRILPYCGHSFHVTCIDLWLQQNSTCPVCRISLREFPDRKRLMQPLFSSALQPHYDIES 158
Query: 155 FVSDPCQFQFSDSGFSVSRRNPDS 84
F + +D+G +S R PD+
Sbjct: 159 FDNRHYHCMIADNG--LSSRTPDN 180
>gb|EAY79962.1| hypothetical protein OsI_35125 [Oryza sativa Indica Group]
Length = 276
Score = 63.9 bits (154), Expect = 2e-08
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRD 225
VLRILP+C H FH VC+DIWL QHST P CRISL D
Sbjct: 143 VLRILPYCGHDFHAVCIDIWLMQHSTCPVCRISLCD 178
>ref|XP_006345857.1| PREDICTED: RING-H2 finger protein ATL28-like [Solanum tuberosum]
Length = 213
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = -3
Query: 329 LRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIESS-M*PLYCPTARSFSPSKTF 153
LRILP C H FH C+DIW +QHST P CRISLR++ + + PL+ RS T
Sbjct: 120 LRILPLCGHYFHATCIDIWFQQHSTCPVCRISLRETADKKCFLQPLFSSAVRSQYTMDTL 179
Query: 152 VSDPCQFQFSDSGFSVSRRNPDS 84
+ Q S SG +S R+ D+
Sbjct: 180 --NVNSNQCSSSGQRLSSRSHDN 200
>gb|ABA95805.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
Length = 320
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/104 (38%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIESSM*PLYCPTARSFSPSKTF 153
VLR+LP+C H FHV C+DIWL HST P CRISL D Y + + SP +
Sbjct: 121 VLRVLPYCGHGFHVACIDIWLMHHSTCPVCRISLCD----------YPDSKHTMSPVPSA 170
Query: 152 V-------------SDPCQFQFSDSGFS-----VSRRNPDSILL 75
V SD C F +G S V R PD + L
Sbjct: 171 VIIPLPPCSPEASRSDQCNCLFVGTGHSPRTSQVLRNEPDQVKL 214
>gb|EEE52775.1| hypothetical protein OsJ_35228 [Oryza sativa Japonica Group]
Length = 383
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/104 (38%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Frame = -3
Query: 332 VLRILPFCRHTFHVVCVDIWLKQHSTRPACRISLRDSLIESSM*PLYCPTARSFSPSKTF 153
VLR+LP+C H FHV C+DIWL HST P CRISL D Y + + SP +
Sbjct: 139 VLRVLPYCGHGFHVACIDIWLMHHSTCPVCRISLCD----------YPDSKHTMSPVPSA 188
Query: 152 V-------------SDPCQFQFSDSGFS-----VSRRNPDSILL 75
V SD C F +G S V R PD + L
Sbjct: 189 VIIPLPPCSPEASRSDQCNCLFVGTGHSPRTSQVLRNEPDQVKL 232