BLASTX nr result
ID: Zingiber24_contig00050663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00050663
(247 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006851086.1| hypothetical protein AMTR_s00025p00244370 [A... 71 2e-10
ref|XP_006408086.1| hypothetical protein EUTSA_v10020234mg [Eutr... 69 8e-10
emb|CBI36792.3| unnamed protein product [Vitis vinifera] 65 7e-09
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,... 65 7e-09
ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera] 65 7e-09
gb|EXC40551.1| hypothetical protein L484_000424 [Morus notabilis] 64 3e-08
ref|XP_004304994.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_006577247.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_006361845.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_004230191.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_004494620.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
gb|EMJ08360.1| hypothetical protein PRUPE_ppa023606mg [Prunus pe... 60 4e-07
gb|ESW19045.1| hypothetical protein PHAVU_006G092000g [Phaseolus... 59 5e-07
ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_006433326.1| hypothetical protein CICLE_v10000527mg [Citr... 59 7e-07
ref|XP_002884507.1| pentatricopeptide repeat-containing protein ... 59 7e-07
ref|XP_002319538.2| hypothetical protein POPTR_0013s02200g [Popu... 59 9e-07
ref|XP_002884506.1| hypothetical protein ARALYDRAFT_896610 [Arab... 59 9e-07
ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat... 58 1e-06
>ref|XP_006851086.1| hypothetical protein AMTR_s00025p00244370 [Amborella trichopoda]
gi|548854757|gb|ERN12667.1| hypothetical protein
AMTR_s00025p00244370 [Amborella trichopoda]
Length = 646
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/81 (39%), Positives = 53/81 (65%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
S +GR E+AR++K+M+++GVKK+ G SWI DR+HPQ +VI+E L L+
Sbjct: 562 SFEGRWDEKARVMKEMRERGVKKEAGVSWIEVGRMVHGFVVGDRMHPQAEVIHEELKGLI 621
Query: 65 AVVRDQEHEARKRSLLYDLEI 3
++RD+ + R LL+D+++
Sbjct: 622 GLMRDEGYVPDLRFLLHDMDL 642
>ref|XP_006408086.1| hypothetical protein EUTSA_v10020234mg [Eutrema salsugineum]
gi|567202871|ref|XP_006408087.1| hypothetical protein
EUTSA_v10020234mg [Eutrema salsugineum]
gi|557109232|gb|ESQ49539.1| hypothetical protein
EUTSA_v10020234mg [Eutrema salsugineum]
gi|557109233|gb|ESQ49540.1| hypothetical protein
EUTSA_v10020234mg [Eutrema salsugineum]
Length = 661
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+G+ ERA+ +K+MK GV K+TG SWI ED++HPQ + IY+VL+ L
Sbjct: 571 SSRGKWKERAKTIKRMKAMGVTKETGVSWIEIENNIHSFVVEDKLHPQAEAIYDVLSELF 630
Query: 65 AVVRDQEHEARKRSLLYDLE 6
VV D+ + KRS+L+ E
Sbjct: 631 PVVVDEGYRPDKRSILHYTE 650
>emb|CBI36792.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+G+ ERAR +K+MK GV K+TG SWI EDR+HP ++IY VL L
Sbjct: 154 SSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELF 213
Query: 65 AVVRDQEHEARKRSLLYDLE 6
++ D+ + KR +LY L+
Sbjct: 214 KLMMDEGYVPDKRFILYYLD 233
>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 736
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SSKGR ERAR +K+MK+ GV K+TG SWI ED+ HPQ ++IY VL L
Sbjct: 404 SSKGRWDERARTIKRMKEMGVAKETGISWIEIEKKVHSFVVEDKKHPQAEIIYGVLAELF 463
Query: 65 AVVRDQEHEARKRSLLY 15
++ D+ + KR +LY
Sbjct: 464 RLMIDEGYVPDKRFILY 480
>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+G+ ERAR +K+MK GV K+TG SWI EDR+HP ++IY VL L
Sbjct: 572 SSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELF 631
Query: 65 AVVRDQEHEARKRSLLYDLE 6
++ D+ + KR +LY L+
Sbjct: 632 KLMMDEGYVPDKRFILYYLD 651
>emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
Length = 542
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/80 (42%), Positives = 48/80 (60%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+G+ ERAR +K+MK GV K+TG SWI EDR+HP ++IY VL L
Sbjct: 458 SSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELF 517
Query: 65 AVVRDQEHEARKRSLLYDLE 6
++ D+ + KR +LY L+
Sbjct: 518 KLMMDEGYVPDKRFILYYLD 537
>gb|EXC40551.1| hypothetical protein L484_000424 [Morus notabilis]
Length = 656
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+G+ ERAR K+MK+ G+ K+TG SWI DR+HPQ ++IY VL L
Sbjct: 572 SSEGKWKERARTFKRMKEMGIAKETGISWIEIDKKVHSFVVWDRIHPQAEMIYGVLAQLF 631
Query: 65 AVVRDQEHEARKRSLLYDL 9
++ D+ + KR +L+ L
Sbjct: 632 KLMTDEGYVPDKRFILHYL 650
>ref|XP_004304994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Fragaria vesca subsp. vesca]
Length = 651
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
S +GR ERA+ +K MKK GV K+ G SWI D++HPQ ++IY +L +L+
Sbjct: 567 SFEGRWKERAKTIKGMKKMGVAKEAGISWIEIEKKVQSFVVGDKMHPQAEIIYRLLADLL 626
Query: 65 AVVRDQEHEARKRSLLYDLE 6
+++D+ + +R LLY L+
Sbjct: 627 RLMKDEGYVPDERFLLYYLD 646
>ref|XP_006577247.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Glycine max]
Length = 656
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+G+ ERAR +K+MK+ GV K+ G SW+ D++HPQ I+ +L+ L+
Sbjct: 572 SSEGKWKERARSIKKMKEMGVAKEVGISWVEIEKKVNSFVVGDKMHPQADAIFWLLSRLL 631
Query: 65 AVVRDQEHEARKRSLLYDLE 6
++D+ + KR +LY L+
Sbjct: 632 KHLKDEGYVPDKRCILYYLD 651
>ref|XP_006361845.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Solanum tuberosum]
Length = 667
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+GR ERAR +++MK+ GV K+TG SWI D++HP+ +IY L L
Sbjct: 569 SSRGRWKERARTIRKMKETGVAKETGTSWIEIEKEIHCFVVADQMHPRTMIIYSTLLELF 628
Query: 65 AVVRDQEHEARKRSLLYDLE 6
+RD+ + R +LY ++
Sbjct: 629 RHMRDEGYVPDNRFILYYMD 648
>ref|XP_004230191.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Solanum lycopersicum]
Length = 667
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+GR ERAR +++MK+ GV K+TG SWI D++HP+ +IY L L
Sbjct: 569 SSRGRWKERARTIRKMKETGVAKETGTSWIEIEKEIHCFVVADQMHPRTMIIYSTLLELF 628
Query: 65 AVVRDQEHEARKRSLLYDLE 6
+RD+ + R +LY ++
Sbjct: 629 RHMRDEGYVPDNRFILYYMD 648
>ref|XP_004494620.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Cicer arietinum]
Length = 661
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
S +G+ ERA +K+MK+ GV K+ G SWI D++HPQ +I+ VL+ L+
Sbjct: 577 SVEGKWKERASAIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDKLHPQADIIFRVLSGLL 636
Query: 65 AVVRDQEHEARKRSLLYDLE 6
++D+ + KR +L+ LE
Sbjct: 637 KHLKDEGYVPDKRCILFYLE 656
>gb|EMJ08360.1| hypothetical protein PRUPE_ppa023606mg [Prunus persica]
Length = 646
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/66 (45%), Positives = 40/66 (60%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+GR ERAR +K MK+ GV K+TG SWI DR+HPQ ++IY VL L
Sbjct: 576 SSEGRWKERARTIKGMKELGVAKETGISWIEIENKVQSFVVGDRMHPQAEIIYGVLAELY 635
Query: 65 AVVRDQ 48
++ D+
Sbjct: 636 RLMTDE 641
>gb|ESW19045.1| hypothetical protein PHAVU_006G092000g [Phaseolus vulgaris]
Length = 599
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+G+ ERAR +K+MK+ GV K+ G SWI D++HPQ I+ +L+ L+
Sbjct: 515 SSEGKWKERARAIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDKMHPQADSIFWLLSVLL 574
Query: 65 AVVRDQEHEARKRSLLYDLE 6
++D+ + KR +LY L+
Sbjct: 575 EHLKDEGYVPDKRCILYYLD 594
>ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Citrus sinensis]
Length = 899
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
S GR ERA+ +K+MK+ GV K+TG SWI +D++HPQ I+ VL L+
Sbjct: 572 SCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELL 631
Query: 65 AVVRDQEHEARKRSLLYDLE 6
++ D+ + KR +L+ L+
Sbjct: 632 RLMIDEGYVPNKRFILHCLD 651
>ref|XP_006433326.1| hypothetical protein CICLE_v10000527mg [Citrus clementina]
gi|557535448|gb|ESR46566.1| hypothetical protein
CICLE_v10000527mg [Citrus clementina]
Length = 659
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
S GR ERA+ +K+MK+ GV K+TG SWI +D++HPQ I+ VL L+
Sbjct: 572 SCSGRWKERAKAIKRMKEMGVDKETGISWIEIEKQVHSFVVDDKMHPQADTIHGVLAELL 631
Query: 65 AVVRDQEHEARKRSLLYDLE 6
++ D+ + KR +L+ L+
Sbjct: 632 RLMIDEGYVPNKRFILHCLD 651
>ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330347|gb|EFH60766.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 676
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+G+ ERA+ +K+MK+ GV K+TG SWI ED++HPQ + IY+VL+ L
Sbjct: 571 SSRGKWKERAKTIKRMKEMGVTKETGISWIEMEKKTHSFVVEDKMHPQAEAIYDVLSGLF 630
Query: 65 AVVRD 51
V D
Sbjct: 631 PVTVD 635
>ref|XP_002319538.2| hypothetical protein POPTR_0013s02200g [Populus trichocarpa]
gi|550324744|gb|EEE95461.2| hypothetical protein
POPTR_0013s02200g [Populus trichocarpa]
Length = 670
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SSKGR ERA+ +K+MK+ V K+TG SWI ED++HPQ ++IY VL L
Sbjct: 568 SSKGRWKERAKTIKRMKEMCVAKETGISWIEIENNLHSFVVEDKMHPQAEIIYGVLAELF 627
Query: 65 AVVRDQEHEARKRSLL 18
+ D+ + KR +L
Sbjct: 628 GHMIDEGYVPDKRYIL 643
>ref|XP_002884506.1| hypothetical protein ARALYDRAFT_896610 [Arabidopsis lyrata subsp.
lyrata] gi|297330346|gb|EFH60765.1| hypothetical protein
ARALYDRAFT_896610 [Arabidopsis lyrata subsp. lyrata]
Length = 801
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+ + ERA+ +K+MK GV K TG SWI ED++HPQ + IY+VL+ L
Sbjct: 548 SSREKWKERAKTIKRMKAMGVTKGTGISWIEIEHKTHCFVVEDKMHPQEEAIYDVLSELF 607
Query: 65 AVVRDQEHEARKRSLL 18
V+ D+ + KR +L
Sbjct: 608 PVMVDEGYRPDKRFIL 623
>ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 833
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = -3
Query: 245 SSKGRLVERARILKQMKKKGVKKDTGASWIXXXXXXXXXXXEDRVHPQGKVIYEVLNNLV 66
SS+G ERAR +++MK+ G K+TG SWI D++HPQ ++IY VL L
Sbjct: 499 SSEGNWKERARTIRKMKEVGTAKETGISWIEIDKKVHSFTVGDKMHPQTEMIYGVLWELF 558
Query: 65 AVVRDQEHEARKRSLLYDLE 6
++ D+ + K+ +LY L+
Sbjct: 559 ILMVDEGYVPDKKFILYYLD 578