BLASTX nr result
ID: Zingiber24_contig00050658
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00050658
(200 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar] 122 6e-26
ref|XP_003558524.1| PREDICTED: pre-mRNA-processing factor 39-lik... 116 3e-24
ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-lik... 115 6e-24
emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera] 115 6e-24
gb|AFW89259.1| hypothetical protein ZEAMMB73_782851 [Zea mays] g... 115 8e-24
gb|AFW89258.1| hypothetical protein ZEAMMB73_782851 [Zea mays] 115 8e-24
ref|XP_006854455.1| hypothetical protein AMTR_s00039p00226980 [A... 114 1e-23
ref|XP_004985249.1| PREDICTED: pre-mRNA-processing factor 39-lik... 114 1e-23
ref|XP_006651161.1| PREDICTED: pre-mRNA-processing factor 39-lik... 114 1e-23
gb|EMT11610.1| Pre-mRNA-processing factor 39 [Aegilops tauschii] 114 1e-23
dbj|BAJ94742.1| predicted protein [Hordeum vulgare subsp. vulgare] 114 1e-23
gb|EEE58564.1| hypothetical protein OsJ_09874 [Oryza sativa Japo... 114 1e-23
gb|EEC74741.1| hypothetical protein OsI_10482 [Oryza sativa Indi... 114 1e-23
ref|NP_001049340.1| Os03g0210400 [Oryza sativa Japonica Group] g... 114 1e-23
ref|XP_004493823.1| PREDICTED: pre-mRNA-processing factor 39-lik... 113 3e-23
gb|ESW34589.1| hypothetical protein PHAVU_001G164500g [Phaseolus... 112 4e-23
ref|XP_006576959.1| PREDICTED: pre-mRNA-processing factor 39-lik... 111 9e-23
gb|EMJ00906.1| hypothetical protein PRUPE_ppa001458mg [Prunus pe... 111 9e-23
ref|XP_003521310.1| PREDICTED: pre-mRNA-processing factor 39-lik... 111 9e-23
ref|XP_002465661.1| hypothetical protein SORBIDRAFT_01g043300 [S... 111 9e-23
>gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]
Length = 823
Score = 122 bits (305), Expect = 6e-26
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RLDS NKV+EVYERA+LAVTYSV+IWL+YC FAISTYEDPDIIRRLFERGLAYVGTD
Sbjct: 213 HEARLDSANKVLEVYERAILAVTYSVDIWLYYCLFAISTYEDPDIIRRLFERGLAYVGTD 272
Query: 182 YLSYQL 199
YLS+ L
Sbjct: 273 YLSFLL 278
>ref|XP_003558524.1| PREDICTED: pre-mRNA-processing factor 39-like [Brachypodium
distachyon]
Length = 724
Score = 116 bits (291), Expect = 3e-24
Identities = 55/66 (83%), Positives = 61/66 (92%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HEGRLD V+KV+EV+ERAVLAVTYSV+IWL+YC FAISTY+DPDIIRRLFERGLAYVGTD
Sbjct: 114 HEGRLDGVSKVIEVFERAVLAVTYSVDIWLNYCQFAISTYDDPDIIRRLFERGLAYVGTD 173
Query: 182 YLSYQL 199
Y S L
Sbjct: 174 YRSNTL 179
>ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
Length = 832
Score = 115 bits (288), Expect = 6e-24
Identities = 55/66 (83%), Positives = 57/66 (86%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RL S+ KVVEVYERAV VTYSV+IWLHYC FAISTY DPD IRRLFERGLAYVGTD
Sbjct: 218 HEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIFAISTYGDPDTIRRLFERGLAYVGTD 277
Query: 182 YLSYQL 199
YLSY L
Sbjct: 278 YLSYPL 283
>emb|CAN60862.1| hypothetical protein VITISV_027789 [Vitis vinifera]
Length = 826
Score = 115 bits (288), Expect = 6e-24
Identities = 55/66 (83%), Positives = 57/66 (86%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RL S+ KVVEVYERAV VTYSV+IWLHYC FAISTY DPD IRRLFERGLAYVGTD
Sbjct: 239 HEARLGSIEKVVEVYERAVQGVTYSVDIWLHYCIFAISTYGDPDTIRRLFERGLAYVGTD 298
Query: 182 YLSYQL 199
YLSY L
Sbjct: 299 YLSYPL 304
>gb|AFW89259.1| hypothetical protein ZEAMMB73_782851 [Zea mays]
gi|413956611|gb|AFW89260.1| hypothetical protein
ZEAMMB73_782851 [Zea mays]
Length = 407
Score = 115 bits (287), Expect = 8e-24
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RLD VNKV+EVYERAVLAVTYSV+IW +YC FAISTY+DPDI+RRLFERGLAYVGTD
Sbjct: 160 HEARLDGVNKVIEVYERAVLAVTYSVDIWYNYCQFAISTYDDPDIVRRLFERGLAYVGTD 219
Query: 182 YLS 190
Y S
Sbjct: 220 YRS 222
>gb|AFW89258.1| hypothetical protein ZEAMMB73_782851 [Zea mays]
Length = 763
Score = 115 bits (287), Expect = 8e-24
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RLD VNKV+EVYERAVLAVTYSV+IW +YC FAISTY+DPDI+RRLFERGLAYVGTD
Sbjct: 160 HEARLDGVNKVIEVYERAVLAVTYSVDIWYNYCQFAISTYDDPDIVRRLFERGLAYVGTD 219
Query: 182 YLS 190
Y S
Sbjct: 220 YRS 222
>ref|XP_006854455.1| hypothetical protein AMTR_s00039p00226980 [Amborella trichopoda]
gi|548858131|gb|ERN15922.1| hypothetical protein
AMTR_s00039p00226980 [Amborella trichopoda]
Length = 779
Score = 114 bits (286), Expect = 1e-23
Identities = 55/64 (85%), Positives = 58/64 (90%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RL +V+KVVEVYERAV AVTYSV+IWLHYC FAISTYEDPD IRRLFERGLAYVGTD
Sbjct: 172 HELRLGTVDKVVEVYERAVQAVTYSVDIWLHYCVFAISTYEDPDTIRRLFERGLAYVGTD 231
Query: 182 YLSY 193
Y SY
Sbjct: 232 YQSY 235
>ref|XP_004985249.1| PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Setaria
italica] gi|514821135|ref|XP_004985250.1| PREDICTED:
pre-mRNA-processing factor 39-like isoform X2 [Setaria
italica]
Length = 771
Score = 114 bits (286), Expect = 1e-23
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HEGRLD NKV+EVYERAVLAVTYSV+IW +YC FAISTY+DP+IIRRLFERGLAYVGTD
Sbjct: 169 HEGRLDGANKVIEVYERAVLAVTYSVDIWYNYCQFAISTYDDPEIIRRLFERGLAYVGTD 228
Query: 182 YLS 190
Y S
Sbjct: 229 YRS 231
>ref|XP_006651161.1| PREDICTED: pre-mRNA-processing factor 39-like [Oryza brachyantha]
Length = 722
Score = 114 bits (285), Expect = 1e-23
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RLD V KV+EVYERAVLAVTYSV+IW +YC FAISTYEDPDIIRRLFERGLAYVGTD
Sbjct: 111 HEARLDGVTKVIEVYERAVLAVTYSVDIWYNYCQFAISTYEDPDIIRRLFERGLAYVGTD 170
Query: 182 YLS 190
Y S
Sbjct: 171 YRS 173
>gb|EMT11610.1| Pre-mRNA-processing factor 39 [Aegilops tauschii]
Length = 692
Score = 114 bits (285), Expect = 1e-23
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HEGRLD VNKV EVYERAVLAVTYSV+IW +YC FAISTY DPD+IRRLF+RGLAYVGTD
Sbjct: 79 HEGRLDGVNKVFEVYERAVLAVTYSVDIWCNYCQFAISTYNDPDVIRRLFDRGLAYVGTD 138
Query: 182 YLSYQL 199
Y S L
Sbjct: 139 YRSNTL 144
>dbj|BAJ94742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 437
Score = 114 bits (285), Expect = 1e-23
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HEGRLD VNKV EVYERAVLAVTYSV+IW +YC FAISTY DPD+IRRLF+RGLAYVGTD
Sbjct: 203 HEGRLDGVNKVFEVYERAVLAVTYSVDIWCNYCQFAISTYNDPDVIRRLFDRGLAYVGTD 262
Query: 182 YLSYQL 199
Y S L
Sbjct: 263 YRSNTL 268
>gb|EEE58564.1| hypothetical protein OsJ_09874 [Oryza sativa Japonica Group]
Length = 789
Score = 114 bits (285), Expect = 1e-23
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RLD V KV+EVYERAVLAVTYSV+IW +YC FAISTYEDPDIIRRLFERGLAYVGTD
Sbjct: 182 HEARLDGVTKVIEVYERAVLAVTYSVDIWYNYCQFAISTYEDPDIIRRLFERGLAYVGTD 241
Query: 182 YLS 190
Y S
Sbjct: 242 YRS 244
>gb|EEC74741.1| hypothetical protein OsI_10482 [Oryza sativa Indica Group]
Length = 789
Score = 114 bits (285), Expect = 1e-23
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RLD V KV+EVYERAVLAVTYSV+IW +YC FAISTYEDPDIIRRLFERGLAYVGTD
Sbjct: 182 HEARLDGVTKVIEVYERAVLAVTYSVDIWYNYCQFAISTYEDPDIIRRLFERGLAYVGTD 241
Query: 182 YLS 190
Y S
Sbjct: 242 YRS 244
>ref|NP_001049340.1| Os03g0210400 [Oryza sativa Japonica Group]
gi|108706795|gb|ABF94590.1| Pre-mRNA processing protein
prp39, putative, expressed [Oryza sativa Japonica Group]
gi|113547811|dbj|BAF11254.1| Os03g0210400 [Oryza sativa
Japonica Group]
Length = 789
Score = 114 bits (285), Expect = 1e-23
Identities = 54/63 (85%), Positives = 57/63 (90%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RLD V KV+EVYERAVLAVTYSV+IW +YC FAISTYEDPDIIRRLFERGLAYVGTD
Sbjct: 182 HEARLDGVTKVIEVYERAVLAVTYSVDIWYNYCQFAISTYEDPDIIRRLFERGLAYVGTD 241
Query: 182 YLS 190
Y S
Sbjct: 242 YRS 244
>ref|XP_004493823.1| PREDICTED: pre-mRNA-processing factor 39-like [Cicer arietinum]
Length = 822
Score = 113 bits (282), Expect = 3e-23
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RL SV+KVVEVYERAV VTYSV++WLHYC FAISTY DPD +RRLFERGLAYVGTD
Sbjct: 212 HEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTD 271
Query: 182 YLSYQL 199
YLS+ L
Sbjct: 272 YLSFPL 277
>gb|ESW34589.1| hypothetical protein PHAVU_001G164500g [Phaseolus vulgaris]
Length = 828
Score = 112 bits (281), Expect = 4e-23
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RL S++KVVEVYERAV VTYSV++WLHYC FAISTY DPD +RRLFERGLAYVGTD
Sbjct: 221 HEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTD 280
Query: 182 YLSYQL 199
YLS+ L
Sbjct: 281 YLSFPL 286
>ref|XP_006576959.1| PREDICTED: pre-mRNA-processing factor 39-like isoform X2 [Glycine
max]
Length = 829
Score = 111 bits (278), Expect = 9e-23
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RL S++KVVEVYERAV VTYSV++WLHYC FAI+TY DPD +RRLFERGLAYVGTD
Sbjct: 219 HEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAITTYGDPDTVRRLFERGLAYVGTD 278
Query: 182 YLSYQL 199
YLS+ L
Sbjct: 279 YLSFPL 284
>gb|EMJ00906.1| hypothetical protein PRUPE_ppa001458mg [Prunus persica]
Length = 823
Score = 111 bits (278), Expect = 9e-23
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RL S++KVVEV+ERAV VTYSV+IWLHYC FAISTY DPD +RRLFERGLAYVGTD
Sbjct: 207 HEARLGSMDKVVEVFERAVQGVTYSVDIWLHYCIFAISTYGDPDTVRRLFERGLAYVGTD 266
Query: 182 YLSYQL 199
YLS+ L
Sbjct: 267 YLSFPL 272
>ref|XP_003521310.1| PREDICTED: pre-mRNA-processing factor 39-like isoform X1 [Glycine
max]
Length = 828
Score = 111 bits (278), Expect = 9e-23
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RL S++KVVEVYERAV VTYSV++WLHYC FAI+TY DPD +RRLFERGLAYVGTD
Sbjct: 218 HEARLGSIDKVVEVYERAVQGVTYSVDMWLHYCIFAITTYGDPDTVRRLFERGLAYVGTD 277
Query: 182 YLSYQL 199
YLS+ L
Sbjct: 278 YLSFPL 283
>ref|XP_002465661.1| hypothetical protein SORBIDRAFT_01g043300 [Sorghum bicolor]
gi|241919515|gb|EER92659.1| hypothetical protein
SORBIDRAFT_01g043300 [Sorghum bicolor]
Length = 768
Score = 111 bits (278), Expect = 9e-23
Identities = 51/63 (80%), Positives = 57/63 (90%)
Frame = +2
Query: 2 HEGRLDSVNKVVEVYERAVLAVTYSVEIWLHYCAFAISTYEDPDIIRRLFERGLAYVGTD 181
HE RLD +KV+EVYERAVLAVTYSV+IW +YC FAISTY+DPDI+RRLFERGLAYVGTD
Sbjct: 160 HEARLDGASKVIEVYERAVLAVTYSVDIWYNYCQFAISTYDDPDIVRRLFERGLAYVGTD 219
Query: 182 YLS 190
Y S
Sbjct: 220 YRS 222