BLASTX nr result
ID: Zingiber24_contig00050629
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00050629
(267 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002893766.1| helicase domain-containing protein [Arabidop... 62 1e-07
gb|AAG51287.1|AC027035_10 helicase, putative [Arabidopsis thaliana] 61 1e-07
ref|NP_174605.1| protein FASCIATED STEM 4 [Arabidopsis thaliana]... 61 1e-07
ref|XP_002865336.1| helicase domain-containing protein [Arabidop... 60 3e-07
ref|XP_006303138.1| hypothetical protein CARUB_v10008109mg [Caps... 59 5e-07
emb|CBI36896.3| unnamed protein product [Vitis vinifera] 58 1e-06
ref|XP_002876980.1| hypothetical protein ARALYDRAFT_904844 [Arab... 57 3e-06
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica... 56 4e-06
ref|XP_006414901.1| hypothetical protein EUTSA_v10024243mg [Eutr... 55 1e-05
>ref|XP_002893766.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297339608|gb|EFH70025.1| helicase domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1245
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/89 (43%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = -1
Query: 267 RAYDRANLVLGYXXXXXXALSFPNPLVTQFT-EKQSTNGDTDXXXXXXXXXXXXXXXXXX 91
R Y RANLVLGY ALS PNPL+ +F EK++ + D D
Sbjct: 848 RNYSRANLVLGYAVAAVAALSLPNPLIMEFEGEKKNESKDADKTVKQEDKQRRKDRKEKI 907
Query: 90 XXXXXRLSNLSSDALTIAYALQLFEISES 4
R SN SSDALT+AYAL FE+SE+
Sbjct: 908 KAARDRFSNPSSDALTVAYALHSFEVSEN 936
>gb|AAG51287.1|AC027035_10 helicase, putative [Arabidopsis thaliana]
Length = 1191
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = -1
Query: 267 RAYDRANLVLGYXXXXXXALSFPNPLVTQFT-EKQSTNGDTDXXXXXXXXXXXXXXXXXX 91
R Y RANL+LGY ALS PNPL+ +F EK++ + D D
Sbjct: 798 RNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNESKDADKTVKQEDKQRKKDRKEKI 857
Query: 90 XXXXXRLSNLSSDALTIAYALQLFEISES 4
R SN SSDALT+AYAL FE+SE+
Sbjct: 858 KAARDRFSNPSSDALTVAYALHSFEVSEN 886
>ref|NP_174605.1| protein FASCIATED STEM 4 [Arabidopsis thaliana]
gi|12322388|gb|AAG51220.1|AC051630_17 RNA helicase,
putative; 27866-23496 [Arabidopsis thaliana]
gi|332193467|gb|AEE31588.1| putative RNA helicase
[Arabidopsis thaliana]
Length = 1237
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = -1
Query: 267 RAYDRANLVLGYXXXXXXALSFPNPLVTQFT-EKQSTNGDTDXXXXXXXXXXXXXXXXXX 91
R Y RANL+LGY ALS PNPL+ +F EK++ + D D
Sbjct: 844 RNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNESKDADKTVKQEDKQRKKDRKEKI 903
Query: 90 XXXXXRLSNLSSDALTIAYALQLFEISES 4
R SN SSDALT+AYAL FE+SE+
Sbjct: 904 KAARDRFSNPSSDALTVAYALHSFEVSEN 932
>ref|XP_002865336.1| helicase domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297311171|gb|EFH41595.1| helicase domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 60.1 bits (144), Expect = 3e-07
Identities = 38/89 (42%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = -1
Query: 267 RAYDRANLVLGYXXXXXXALSFPNPLVTQFT-EKQSTNGDTDXXXXXXXXXXXXXXXXXX 91
R Y R NLVLGY ALS PNPL+ +F EK++ + D D
Sbjct: 854 RNYSRVNLVLGYAVAAVAALSLPNPLIMEFEGEKKNESKDADKTVKQEDKQRRKDRKEKI 913
Query: 90 XXXXXRLSNLSSDALTIAYALQLFEISES 4
R SN SSDALT+AYAL FE+SE+
Sbjct: 914 KAARDRFSNPSSDALTVAYALHSFEVSEN 942
>ref|XP_006303138.1| hypothetical protein CARUB_v10008109mg [Capsella rubella]
gi|482571849|gb|EOA36036.1| hypothetical protein
CARUB_v10008109mg [Capsella rubella]
Length = 1244
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = -1
Query: 261 YDRANLVLGYXXXXXXALSFPNPLVTQFT-EKQSTNGDTDXXXXXXXXXXXXXXXXXXXX 85
Y RANLVLGY ALS PNPL+ QF +K++ + D D
Sbjct: 856 YSRANLVLGYAVAAVAALSLPNPLIMQFEGDKKNESEDADKTVKQDEKQRRKERKEKIRA 915
Query: 84 XXXRLSNLSSDALTIAYALQLFEISES 4
R SN SSDALT+AYAL FE+S++
Sbjct: 916 ARDRFSNPSSDALTVAYALHSFEVSDN 942
>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
Length = 1098
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/89 (42%), Positives = 43/89 (48%)
Frame = -1
Query: 267 RAYDRANLVLGYXXXXXXALSFPNPLVTQFTEKQSTNGDTDXXXXXXXXXXXXXXXXXXX 88
+ Y RANLVLGY ALS PNP V QF + N D
Sbjct: 745 KGYARANLVLGYAVAAAAALSLPNPFVMQFEGNHTRNDGLD---------QKKKLKETAK 795
Query: 87 XXXXRLSNLSSDALTIAYALQLFEISESP 1
+ SN SSDALT+AYALQ FE+S SP
Sbjct: 796 VSRAKFSNPSSDALTVAYALQCFELSGSP 824
>ref|XP_002876980.1| hypothetical protein ARALYDRAFT_904844 [Arabidopsis lyrata subsp.
lyrata] gi|297322818|gb|EFH53239.1| hypothetical protein
ARALYDRAFT_904844 [Arabidopsis lyrata subsp. lyrata]
Length = 995
Score = 56.6 bits (135), Expect = 3e-06
Identities = 38/87 (43%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = -1
Query: 261 YDRANLVLGYXXXXXXALSFPNPLVTQFT-EKQSTNGDTDXXXXXXXXXXXXXXXXXXXX 85
Y RANLVLGY ALS PNPL QF EK++ D
Sbjct: 502 YSRANLVLGYAVAAVAALSLPNPLTMQFEGEKKTEFEDAGKIVKQEDKQWRKERKEKIKA 561
Query: 84 XXXRLSNLSSDALTIAYALQLFEISES 4
R SN SSDALT+AYAL FE+SE+
Sbjct: 562 ARDRFSNQSSDALTVAYALHSFEVSEN 588
>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
vinifera]
Length = 1414
Score = 56.2 bits (134), Expect = 4e-06
Identities = 39/100 (39%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Frame = -1
Query: 267 RAYDRANLVLGYXXXXXXALSFPNPLVTQFTEKQSTNGD-----------TDXXXXXXXX 121
+ Y RANLVLGY ALS PNP V QF + N TD
Sbjct: 986 KGYARANLVLGYAVAAAAALSLPNPFVMQFEGNHTRNDGLDQVEKANTPVTDEIVDKQDK 1045
Query: 120 XXXXXXXXXXXXXXXRLSNLSSDALTIAYALQLFEISESP 1
+ SN SSDALT+AYALQ FE+S SP
Sbjct: 1046 LKKKKLKETAKVSRAKFSNPSSDALTVAYALQCFELSGSP 1085
>ref|XP_006414901.1| hypothetical protein EUTSA_v10024243mg [Eutrema salsugineum]
gi|557116071|gb|ESQ56354.1| hypothetical protein
EUTSA_v10024243mg [Eutrema salsugineum]
Length = 1211
Score = 55.1 bits (131), Expect = 1e-05
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = -1
Query: 261 YDRANLVLGYXXXXXXALSFPNPLVTQFTEKQSTNGDTD--XXXXXXXXXXXXXXXXXXX 88
Y RANLVL Y ALS PNPL+ QF ++ T + D
Sbjct: 807 YSRANLVLAYAVAAVAALSLPNPLIMQFEGEKKTESEEDAGKTVKQEDKQRRKDRKDKIK 866
Query: 87 XXXXRLSNLSSDALTIAYALQLFEISES 4
+ SN SSDALT+AYAL FE+SE+
Sbjct: 867 AARDKFSNPSSDALTVAYALHSFEVSEN 894