BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00050530
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
emb|CBI21289.3| unnamed protein product [Vitis vinifera]               77   3e-12
ref|XP_006338733.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_006338732.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_004233581.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
gb|EOY02924.1| Tetratricopeptide repeat (TPR)-like superfamily p...    74   3e-11
ref|XP_004306318.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ...    72   1e-10
ref|XP_006599001.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|XP_006395522.1| hypothetical protein EUTSA_v10003772mg [Eutr...    70   4e-10
ref|XP_002512857.1| pentatricopeptide repeat-containing protein,...    70   4e-10
ref|XP_006290700.1| hypothetical protein CARUB_v10016795mg [Caps...    69   5e-10
gb|ESW33636.1| hypothetical protein PHAVU_001G086300g [Phaseolus...    69   6e-10
ref|XP_006468878.1| PREDICTED: pentatricopeptide repeat-containi...    69   8e-10
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226...    69   8e-10
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...    69   8e-10
ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. l...    69   8e-10
gb|EXB62848.1| hypothetical protein L484_008698 [Morus notabilis]      68   1e-09
gb|EPS57626.1| hypothetical protein M569_17191, partial [Genlise...    67   2e-09
ref|NP_001078212.1| pentatricopeptide repeat-containing protein ...    66   5e-09

>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/86 (44%), Positives = 55/86 (63%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F + +D +++ SWNS+IA+LAR+GDS+ ALRAF+S+R+L L+P+                
Sbjct: 108 FNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD 167

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              GRQ H  +L FG  PDLFV+S+L
Sbjct: 168 LHSGRQAHQQALIFGFEPDLFVSSAL 193


>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/86 (44%), Positives = 55/86 (63%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F + +D +++ SWNS+IA+LAR+GDS+ ALRAF+S+R+L L+P+                
Sbjct: 32  FNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD 91

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              GRQ H  +L FG  PDLFV+S+L
Sbjct: 92  LHSGRQAHQQALIFGFEPDLFVSSAL 117


>ref|XP_006338733.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 619

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 53/86 (61%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F R +D S + SWNSIIADLAR+GD++ ALRAF+S+R+L L+P+                
Sbjct: 22  FNRYLDKSDVFSWNSIIADLARSGDAVEALRAFSSMRKLSLKPNRSTFPCAVKSCSSLSD 81

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +L FG   DLFV+S+L
Sbjct: 82  LTSGKQTHQQALIFGYDTDLFVSSAL 107


>ref|XP_006338732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 645

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 53/86 (61%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F R +D S + SWNSIIADLAR+GD++ ALRAF+S+R+L L+P+                
Sbjct: 22  FNRYLDKSDVFSWNSIIADLARSGDAVEALRAFSSMRKLSLKPNRSTFPCAVKSCSSLSD 81

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +L FG   DLFV+S+L
Sbjct: 82  LTSGKQTHQQALIFGYDTDLFVSSAL 107


>ref|XP_004233581.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Solanum lycopersicum]
          Length = 642

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/86 (45%), Positives = 53/86 (61%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F R +D S + SWNSIIADLAR+GD++ ALRAF+S+R+L L+P+                
Sbjct: 22  FSRYLDKSDVFSWNSIIADLARSGDAVEALRAFSSMRKLSLKPNRSTFPCAVKSCSSLSD 81

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +L FG   DLFV+S+L
Sbjct: 82  LTSGKQTHQQALIFGYDTDLFVSSAL 107


>gb|EOY02924.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 659

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 40/86 (46%), Positives = 53/86 (61%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F + +D SS+ SWNSIIA+LARAGDS  ALRAF+S+R+L L+P+                
Sbjct: 29  FSKYVDKSSVWSWNSIIAELARAGDSAEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD 88

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +L FG   DLFV+S+L
Sbjct: 89  LNSGKQTHQQALIFGYGSDLFVSSAL 114


>ref|XP_004306318.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 747

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/86 (43%), Positives = 53/86 (61%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F + +D + ++SWNS+IADLAR+G+S+ AL AF+S+R+L LRP+                
Sbjct: 123 FNKYVDKTDVSSWNSVIADLARSGNSVEALGAFSSMRKLSLRPNRSSFPCAIKSCSALLD 182

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              GRQ H  +L FG   DLFV+S+L
Sbjct: 183 VHSGRQAHQQALVFGFESDLFVSSAL 208


>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240699|gb|ABD32557.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499496|gb|AES80699.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 672

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/86 (43%), Positives = 52/86 (60%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           FG+ +D +S+ SWNSIIAD AR+GDS+ AL AF+S+R+L L P+                
Sbjct: 42  FGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYD 101

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q+H  +  FG   D+FVAS+L
Sbjct: 102 LCAGKQIHQQAFVFGYGSDIFVASAL 127


>ref|XP_006599001.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Glycine max]
          Length = 653

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/86 (40%), Positives = 51/86 (59%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           FG+ +D +S+ SWN++IADL+R+GDS+ AL AFAS+R+L L P+                
Sbjct: 25  FGKYVDKTSVHSWNTVIADLSRSGDSVEALSAFASMRKLSLHPNRSTFPCAIKACAALSD 84

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G Q H  +  FG   D+FV+S+L
Sbjct: 85  LRAGAQAHQQAFAFGFGHDIFVSSAL 110


>ref|XP_006395522.1| hypothetical protein EUTSA_v10003772mg [Eutrema salsugineum]
           gi|557092161|gb|ESQ32808.1| hypothetical protein
           EUTSA_v10003772mg [Eutrema salsugineum]
          Length = 664

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/86 (41%), Positives = 50/86 (58%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F R +D + + SWNS+IADLAR+GDS  ALRAF+S+R+L L P+                
Sbjct: 32  FNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPNRSSFPCAIKACSSLLD 91

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +  FG   D+FV+S+L
Sbjct: 92  IFSGKQTHQQAFVFGFQSDIFVSSAL 117


>ref|XP_002512857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547868|gb|EEF49360.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 454

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/86 (41%), Positives = 53/86 (61%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F +  + +++ SWNS+IADLAR+GDSI +LRAF S+R+L+L+P+                
Sbjct: 38  FNKYFEKTNVFSWNSLIADLARSGDSIESLRAFYSMRKLNLKPNRSTFPCAIKACSSLLD 97

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +L FG   DLFV+S+L
Sbjct: 98  LHWGKQTHQQALVFGFESDLFVSSAL 123


>ref|XP_006290700.1| hypothetical protein CARUB_v10016795mg [Capsella rubella]
           gi|482559407|gb|EOA23598.1| hypothetical protein
           CARUB_v10016795mg [Capsella rubella]
          Length = 663

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/86 (41%), Positives = 50/86 (58%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F R +D + + SWNS+IADLAR+GDS  ALRAF+S+R+L L P+                
Sbjct: 32  FNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPNRSSFPCTIKACSSLLD 91

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +  FG   D+FV+S+L
Sbjct: 92  IFSGKQTHQQAFVFGYQSDIFVSSAL 117


>gb|ESW33636.1| hypothetical protein PHAVU_001G086300g [Phaseolus vulgaris]
          Length = 669

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 34/86 (39%), Positives = 52/86 (60%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           FG+ +D +S++SWN++IADLAR+GDS+ AL AF+S+R+L L P+                
Sbjct: 41  FGKYVDKTSVSSWNTVIADLARSGDSVEALSAFSSMRKLSLHPNRSTFPCAIKACAALSD 100

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G Q H  +  FG   D+FV+++L
Sbjct: 101 LRAGAQTHQQAFVFGFGRDIFVSAAL 126


>ref|XP_006468878.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Citrus sinensis]
          Length = 662

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/86 (40%), Positives = 50/86 (58%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F + +D +++ SWNS+IADLAR GDS+ ALRAF+S+R+L L P                 
Sbjct: 29  FNKYVDKNNVFSWNSVIADLARGGDSVEALRAFSSMRKLSLTPTRSTFPCAIKSCSALHD 88

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +  FG   D+FV+S+L
Sbjct: 89  LHSGKQAHQQAFIFGFHRDVFVSSAL 114


>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 38/86 (44%), Positives = 49/86 (56%)
 Frame = +1

Query: 58   FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
            F + +D S++ SWNS+IADLAR GDS+ ALRAF+SLR+L L P                 
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 1157

Query: 238  XXXGRQLHLLSLRFGLLPDLFVASSL 315
               GR  H  +  FG   DLFV+S+L
Sbjct: 1158 LVSGRMSHQQAFVFGFETDLFVSSAL 1183


>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 38/86 (44%), Positives = 49/86 (56%)
 Frame = +1

Query: 58   FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
            F + +D S++ SWNS+IADLAR GDS+ ALRAF+SLR+L L P                 
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030

Query: 238  XXXGRQLHLLSLRFGLLPDLFVASSL 315
               GR  H  +  FG   DLFV+S+L
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSAL 2056


>ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 659

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 36/86 (41%), Positives = 49/86 (56%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F R +D + + SWNS+IADLAR+GDS  ALRAF+S+R+L L P                 
Sbjct: 32  FNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLD 91

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +  FG   D+FV+S+L
Sbjct: 92  IFSGKQTHQQAFVFGYQSDIFVSSAL 117


>gb|EXB62848.1| hypothetical protein L484_008698 [Morus notabilis]
          Length = 671

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 34/86 (39%), Positives = 53/86 (61%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F + +D++++++WNS+IADLAR+G S+ AL AF+S+R+L LRP                 
Sbjct: 47  FNKYVDSTNVSNWNSVIADLARSGFSVEALLAFSSMRKLSLRPTRSTFPCVIKSCSALSD 106

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +L F L  D+FV+S+L
Sbjct: 107 LRSGKQTHQQALLFALESDIFVSSAL 132


>gb|EPS57626.1| hypothetical protein M569_17191, partial [Genlisea aurea]
          Length = 639

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/86 (40%), Positives = 51/86 (59%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F + +D +S+ SWNS+I++LAR+GDS  AL+AF+SLR+  L+P+                
Sbjct: 10  FSKYVDRTSIHSWNSVISELARSGDSEEALKAFSSLRKSALKPNRASFPCTIKSCAAIAD 69

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  S  FG   DLFV+S+L
Sbjct: 70  LTSGKQAHQQSFVFGYASDLFVSSAL 95


>ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
           gi|9279668|dbj|BAB01225.1| selenium-binding protein-like
           [Arabidopsis thaliana] gi|332643694|gb|AEE77215.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 659

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 35/86 (40%), Positives = 48/86 (55%)
 Frame = +1

Query: 58  FGRVIDTSSLASWNSIIADLARAGDSIHALRAFASLRRLHLRPDCXXXXXXXXXXXXXXX 237
           F R +D + + SWNS+IADLAR+GDS  AL AF+S+R+L L P                 
Sbjct: 32  FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFD 91

Query: 238 XXXGRQLHLLSLRFGLLPDLFVASSL 315
              G+Q H  +  FG   D+FV+S+L
Sbjct: 92  IFSGKQTHQQAFVFGYQSDIFVSSAL 117