BLASTX nr result
ID: Zingiber24_contig00050488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00050488
(360 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004309213.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 101 1e-19
dbj|BAJ89763.1| predicted protein [Hordeum vulgare subsp. vulgare] 98 1e-18
gb|EOY21331.1| Transducin/WD40 repeat-like superfamily protein [... 97 2e-18
gb|EXC15972.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis] 97 2e-18
gb|AFW69795.1| hypothetical protein ZEAMMB73_177863 [Zea mays] 96 5e-18
gb|EMJ20682.1| hypothetical protein PRUPE_ppa022067mg [Prunus pe... 95 8e-18
ref|XP_006490375.1| PREDICTED: WD repeat-containing protein RUP2... 94 2e-17
ref|XP_006421902.1| hypothetical protein CICLE_v10005222mg [Citr... 94 2e-17
ref|XP_002453175.1| hypothetical protein SORBIDRAFT_04g001120 [S... 94 2e-17
emb|CBI22758.3| unnamed protein product [Vitis vinifera] 93 4e-17
ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 93 4e-17
ref|XP_004954763.1| PREDICTED: WD repeat-containing protein RUP1... 92 7e-17
dbj|BAD07933.1| putative COP1 [Oryza sativa Japonica Group] gi|4... 92 9e-17
gb|EAZ21488.1| hypothetical protein OsJ_05108 [Oryza sativa Japo... 92 9e-17
gb|EAY84193.1| hypothetical protein OsI_05571 [Oryza sativa Indi... 92 9e-17
ref|XP_003570811.1| PREDICTED: protein SPA1-RELATED 3-like [Brac... 91 1e-16
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 90 3e-16
gb|EPS69049.1| hypothetical protein M569_05710, partial [Genlise... 89 5e-16
ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric... 89 8e-16
ref|XP_002318819.2| hypothetical protein POPTR_0012s13290g [Popu... 87 3e-15
>ref|XP_004309213.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Fragaria vesca
subsp. vesca]
Length = 385
Score = 101 bits (251), Expect = 1e-19
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R++R + GHAN RSFVG+SVWR GL+GCGSE+++V+VYD+RW +P+WV GFG
Sbjct: 283 REIRTYSGHANNRSFVGLSVWRSGGLLGCGSENNQVYVYDVRWGEPVWVHGFGPMGSEGC 342
Query: 179 DQNGFVGAVSWRQ 141
D FV +V WRQ
Sbjct: 343 DDRWFVSSVCWRQ 355
>dbj|BAJ89763.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 412
Score = 98.2 bits (243), Expect = 1e-18
Identities = 42/73 (57%), Positives = 53/73 (72%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R+VR + GH + RSFVGM +WRGAGL+ GSES+ VFVYDLRW P+WV F +++ S
Sbjct: 303 REVRSYSGHVSGRSFVGMGLWRGAGLVASGSESNHVFVYDLRWGKPVWVHPFDVASDSSS 362
Query: 179 DQNGFVGAVSWRQ 141
D GFV AV+W Q
Sbjct: 363 DAGGFVSAVTWLQ 375
>gb|EOY21331.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 414
Score = 97.4 bits (241), Expect = 2e-18
Identities = 42/73 (57%), Positives = 54/73 (73%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R +R ++GH N+RSFVG+SVWR GL+G GSE+++VFVYD RW +PIWV GF A
Sbjct: 316 RLIRTYKGHVNSRSFVGLSVWRHGGLLGSGSENNQVFVYDKRWGEPIWVHGFEPLGRAGG 375
Query: 179 DQNGFVGAVSWRQ 141
+GFV +VSWRQ
Sbjct: 376 RDHGFVSSVSWRQ 388
>gb|EXC15972.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]
Length = 396
Score = 97.1 bits (240), Expect = 2e-18
Identities = 43/73 (58%), Positives = 56/73 (76%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R VR ++GH N RSFVG+SVWR GL+GCGSE+++VFVYD RW +PIWV+GF E+
Sbjct: 297 RAVRTYKGHVNNRSFVGLSVWRKGGLLGCGSENNQVFVYDKRWGEPIWVRGFEPTGESGC 356
Query: 179 DQNGFVGAVSWRQ 141
++ GFV +V WRQ
Sbjct: 357 ER-GFVSSVCWRQ 368
>gb|AFW69795.1| hypothetical protein ZEAMMB73_177863 [Zea mays]
Length = 416
Score = 95.9 bits (237), Expect = 5e-18
Identities = 48/87 (55%), Positives = 55/87 (63%), Gaps = 14/87 (16%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGF-------- 204
R+VR + GHA+ARSFVGM VWRGAGL+ GSES+ VFVYDLRWA PIWVQ F
Sbjct: 278 REVRSYSGHASARSFVGMGVWRGAGLVASGSESNHVFVYDLRWAKPIWVQPFASHGPVTI 337
Query: 203 ------GRRTEARSDQNGFVGAVSWRQ 141
A + GFV AV+WRQ
Sbjct: 338 GPEQVDAHAPAAGAGAGGFVSAVAWRQ 364
>gb|EMJ20682.1| hypothetical protein PRUPE_ppa022067mg [Prunus persica]
Length = 380
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R++R ++GH N RSFVG+SVWR LIGCGSE + V+VYD RW +PIW+ GFG E S
Sbjct: 273 REIRTYKGHTNNRSFVGLSVWRNGKLIGCGSEDNRVYVYDKRWGEPIWLHGFGAVGEGSS 332
Query: 179 ----DQNGFVGAVSWRQ 141
++ GFV +V WRQ
Sbjct: 333 GGCDEELGFVSSVCWRQ 349
>ref|XP_006490375.1| PREDICTED: WD repeat-containing protein RUP2-like [Citrus sinensis]
Length = 366
Score = 94.0 bits (232), Expect = 2e-17
Identities = 40/73 (54%), Positives = 56/73 (76%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R +R ++GH N R+FVG+SVWR GL+GCGSE+++VFVYD+RW +P+WV F T A S
Sbjct: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGS 324
Query: 179 DQNGFVGAVSWRQ 141
++ GFV +V WR+
Sbjct: 325 ER-GFVSSVCWRR 336
>ref|XP_006421902.1| hypothetical protein CICLE_v10005222mg [Citrus clementina]
gi|557523775|gb|ESR35142.1| hypothetical protein
CICLE_v10005222mg [Citrus clementina]
Length = 366
Score = 94.0 bits (232), Expect = 2e-17
Identities = 40/73 (54%), Positives = 56/73 (76%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R +R ++GH N R+FVG+SVWR GL+GCGSE+++VFVYD+RW +P+WV F T A S
Sbjct: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGS 324
Query: 179 DQNGFVGAVSWRQ 141
++ GFV +V WR+
Sbjct: 325 ER-GFVSSVCWRR 336
>ref|XP_002453175.1| hypothetical protein SORBIDRAFT_04g001120 [Sorghum bicolor]
gi|241933006|gb|EES06151.1| hypothetical protein
SORBIDRAFT_04g001120 [Sorghum bicolor]
Length = 142
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/86 (55%), Positives = 55/86 (63%), Gaps = 13/86 (15%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGF-------G 201
R+VR + GHA+ARSFVGM VWRGAGL+ GSES+ VFVYDLRWA PIWV F G
Sbjct: 16 REVRSYSGHASARSFVGMGVWRGAGLVASGSESNHVFVYDLRWAKPIWVHPFFASHGHGG 75
Query: 200 RRTEARSD------QNGFVGAVSWRQ 141
+D GFV AV+WRQ
Sbjct: 76 AHGPVTTDAAAAAAAGGFVSAVAWRQ 101
>emb|CBI22758.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R +R + GH N RSFVG+SVWR GL+GCGSE++ VFVYD RW +PIWV FG +
Sbjct: 160 RMIRVYMGHMNTRSFVGLSVWRTGGLLGCGSENNHVFVYDKRWGEPIWVHEFGVGSRDGR 219
Query: 179 DQNGFVGAVSWRQ 141
D N FV +V WRQ
Sbjct: 220 DPN-FVSSVCWRQ 231
>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 383
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/73 (57%), Positives = 51/73 (69%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R +R + GH N RSFVG+SVWR GL+GCGSE++ VFVYD RW +PIWV FG +
Sbjct: 284 RMIRVYMGHMNTRSFVGLSVWRTGGLLGCGSENNHVFVYDKRWGEPIWVHEFGVGSRDGR 343
Query: 179 DQNGFVGAVSWRQ 141
D N FV +V WRQ
Sbjct: 344 DPN-FVSSVCWRQ 355
>ref|XP_004954763.1| PREDICTED: WD repeat-containing protein RUP1-like [Setaria italica]
Length = 444
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/89 (53%), Positives = 56/89 (62%), Gaps = 16/89 (17%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGF---GRRT- 192
R+VR + GHA+ARSFVGM VWR AGL+ GSES+ VFVYDLRWA PIWV F G +
Sbjct: 315 REVRSYSGHASARSFVGMGVWRAAGLVASGSESNHVFVYDLRWAKPIWVHPFVVGGAHSP 374
Query: 191 ------------EARSDQNGFVGAVSWRQ 141
EA + GFV AV+WRQ
Sbjct: 375 VTTTSTSPSSVGEAAAAAGGFVSAVAWRQ 403
>dbj|BAD07933.1| putative COP1 [Oryza sativa Japonica Group]
gi|41052817|dbj|BAD07708.1| putative COP1 [Oryza sativa
Japonica Group]
Length = 404
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R+VR + GH + RSFVGM VWRGAGLI GSES VFVYDLRW+ PIWV F S
Sbjct: 294 REVRSYSGHVSGRSFVGMGVWRGAGLIASGSESGHVFVYDLRWSKPIWVHPF-------S 346
Query: 179 DQNGFVGAVSWRQ 141
+ FV AV+WRQ
Sbjct: 347 HADAFVSAVAWRQ 359
>gb|EAZ21488.1| hypothetical protein OsJ_05108 [Oryza sativa Japonica Group]
Length = 277
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R+VR + GH + RSFVGM VWRGAGLI GSES VFVYDLRW+ PIWV F S
Sbjct: 167 REVRSYSGHVSGRSFVGMGVWRGAGLIASGSESGHVFVYDLRWSKPIWVHPF-------S 219
Query: 179 DQNGFVGAVSWRQ 141
+ FV AV+WRQ
Sbjct: 220 HADAFVSAVAWRQ 232
>gb|EAY84193.1| hypothetical protein OsI_05571 [Oryza sativa Indica Group]
Length = 404
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/73 (60%), Positives = 50/73 (68%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R+VR + GH + RSFVGM VWRGAGLI GSES VFVYDLRW+ PIWV F S
Sbjct: 294 REVRSYSGHVSGRSFVGMGVWRGAGLIASGSESGHVFVYDLRWSKPIWVHPF-------S 346
Query: 179 DQNGFVGAVSWRQ 141
+ FV AV+WRQ
Sbjct: 347 HADAFVSAVAWRQ 359
>ref|XP_003570811.1| PREDICTED: protein SPA1-RELATED 3-like [Brachypodium distachyon]
Length = 421
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/73 (56%), Positives = 50/73 (68%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R+VR + GH + RSFVGM +WRG GL+ CGSES+ VFVYDLRW P+WV F +
Sbjct: 298 REVRAYSGHVSGRSFVGMGLWRGPGLVACGSESNHVFVYDLRWPKPVWVHPF--FVPSGD 355
Query: 179 DQNGFVGAVSWRQ 141
GFV AV+WRQ
Sbjct: 356 GGGGFVSAVAWRQ 368
>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 382
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/73 (54%), Positives = 51/73 (69%)
Frame = -2
Query: 359 RQVREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARS 180
R +R + GH N R+FVG+SVWR GL+GCGSE++ VFVYD RW++PIWV FG +
Sbjct: 284 RMIRVYMGHMNTRNFVGLSVWRTGGLLGCGSENNHVFVYDKRWSEPIWVHEFGGGSRDGC 343
Query: 179 DQNGFVGAVSWRQ 141
D FV +V WRQ
Sbjct: 344 DPK-FVSSVCWRQ 355
>gb|EPS69049.1| hypothetical protein M569_05710, partial [Genlisea aurea]
Length = 357
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Frame = -2
Query: 353 VREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARSDQ 174
+R + GH NAR FVG+SVWR GL+ CGSE + VFVYD RW++PIW++GF + Q
Sbjct: 258 IRTYSGHTNARRFVGLSVWRSGGLLCCGSEDNNVFVYDNRWSNPIWIRGFEETSNGAQRQ 317
Query: 173 NG---FVGAVSWRQ 141
+G FV V WRQ
Sbjct: 318 SGSDPFVSGVCWRQ 331
>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
cop1, putative [Ricinus communis]
Length = 426
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = -2
Query: 353 VREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARSDQ 174
+R ++GH N+R+FVG+SVWR GL+GCGSE+++VFVYD RW++PIW G G +
Sbjct: 330 LRTYKGHLNSRNFVGLSVWRNGGLLGCGSENNQVFVYDKRWSEPIWAYGSGPAAD----- 384
Query: 173 NGFVGAVSWRQ 141
+GFV +V W Q
Sbjct: 385 HGFVNSVCWSQ 395
>ref|XP_002318819.2| hypothetical protein POPTR_0012s13290g [Populus trichocarpa]
gi|550327039|gb|EEE97039.2| hypothetical protein
POPTR_0012s13290g [Populus trichocarpa]
Length = 390
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = -2
Query: 353 VREFRGHANARSFVGMSVWRGAGLIGCGSESDEVFVYDLRWADPIWVQGFGRRTEARSDQ 174
+R ++GH N+RSF+G+SVWR GL+GCGSE+++VFVYD RW +PIWV
Sbjct: 295 IRSYKGHVNSRSFIGLSVWRNGGLLGCGSENNKVFVYDRRWGEPIWVHE-SNPVGRDGCG 353
Query: 173 NGFVGAVSWRQ 141
GFV +V WRQ
Sbjct: 354 GGFVSSVCWRQ 364