BLASTX nr result
ID: Zingiber24_contig00050484
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00050484
(314 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006433587.1| hypothetical protein CICLE_v10001544mg [Citr... 84 1e-14
gb|EOY15801.1| Cyclin A3,1 [Theobroma cacao] 84 2e-14
ref|XP_006595986.1| PREDICTED: putative cyclin-A3-1-like isoform... 84 3e-14
ref|XP_006472254.1| PREDICTED: cyclin-A3-4-like [Citrus sinensis] 84 3e-14
gb|AFK65510.1| cyclin A, partial [Dimocarpus longan] 84 3e-14
ref|XP_003544479.1| PREDICTED: putative cyclin-A3-1-like isoform... 84 3e-14
ref|XP_006601271.1| PREDICTED: putative cyclin-A3-1-like isoform... 83 3e-14
ref|XP_003550316.1| PREDICTED: putative cyclin-A3-1-like isoform... 83 3e-14
gb|EXC04823.1| Putative cyclin-A3-1 [Morus notabilis] 82 6e-14
ref|XP_004290941.1| PREDICTED: putative cyclin-A3-1-like [Fragar... 82 1e-13
ref|XP_002301157.1| cyclin A3.1 family protein [Populus trichoca... 82 1e-13
ref|XP_002891340.1| CYCA3_4 [Arabidopsis lyrata subsp. lyrata] g... 81 1e-13
ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform... 81 1e-13
emb|CAN76718.1| hypothetical protein VITISV_010485 [Vitis vinifera] 81 1e-13
gb|EMJ28826.1| hypothetical protein PRUPE_ppa024921mg [Prunus pe... 81 2e-13
gb|EMJ25522.1| hypothetical protein PRUPE_ppa020376mg [Prunus pe... 80 2e-13
gb|EXC04822.1| hypothetical protein L484_010245 [Morus notabilis] 80 4e-13
ref|XP_006362078.1| PREDICTED: cyclin-A3-2-like [Solanum tuberosum] 80 4e-13
ref|XP_006393614.1| hypothetical protein EUTSA_v10011590mg [Eutr... 80 4e-13
ref|XP_003578446.1| PREDICTED: cyclin-A3-2-like [Brachypodium di... 80 4e-13
>ref|XP_006433587.1| hypothetical protein CICLE_v10001544mg [Citrus clementina]
gi|557535709|gb|ESR46827.1| hypothetical protein
CICLE_v10001544mg [Citrus clementina]
Length = 372
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +2
Query: 29 RVDPQMCKSYSDRSVPRSKGKARTRKKAKLRPASSSDDITLR-EDPQMCTSYASDICQYL 205
+ +P+ K+ + +++ K KA+ + KA + DI R +DPQ+C +Y +DI QYL
Sbjct: 54 KAEPRKAKAKAKKALLTEKTKAKAKTKAT---EDADIDIDARSDDPQICGAYVTDIYQYL 110
Query: 206 RSMEAEPNRRPLPNYMESVQRDITAGMREVMVNWL 310
SME +P RRPLP+Y+E VQ+D++A MR V+V+WL
Sbjct: 111 HSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWL 145
>gb|EOY15801.1| Cyclin A3,1 [Theobroma cacao]
Length = 390
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 8/87 (9%)
Frame = +2
Query: 74 PRSKGKARTRK-----KAKLRPASSSDDITL---REDPQMCTSYASDICQYLRSMEAEPN 229
P+ KGKA+TR K K A D+ + ++PQMC Y SDI +YL ME +P
Sbjct: 63 PKVKGKAKTRVAKPALKEKKEEAQDEKDVDIDAKSDNPQMCGHYVSDIYEYLHQMEVDPK 122
Query: 230 RRPLPNYMESVQRDITAGMREVMVNWL 310
RRPLP+Y+E VQ+D+TA MR ++V+WL
Sbjct: 123 RRPLPDYIEKVQKDVTANMRGILVDWL 149
>ref|XP_006595986.1| PREDICTED: putative cyclin-A3-1-like isoform X2 [Glycine max]
Length = 340
Score = 83.6 bits (205), Expect = 3e-14
Identities = 34/72 (47%), Positives = 52/72 (72%)
Frame = +2
Query: 95 RTRKKAKLRPASSSDDITLREDPQMCTSYASDICQYLRSMEAEPNRRPLPNYMESVQRDI 274
+ +++ RP S+ + + R DPQ+C Y SDI +YLR ME +P++RPLP+Y++ VQRD+
Sbjct: 61 KVKREQPARPVSTPEKVEERHDPQLCGPYVSDIYEYLRGMEVDPSKRPLPDYVQKVQRDV 120
Query: 275 TAGMREVMVNWL 310
A MR V+V+WL
Sbjct: 121 NANMRGVLVDWL 132
>ref|XP_006472254.1| PREDICTED: cyclin-A3-4-like [Citrus sinensis]
Length = 372
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/95 (43%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +2
Query: 29 RVDPQMCKSYSDRSVPRSKGKARTRKKAKLRPASSSDDITLR-EDPQMCTSYASDICQYL 205
+ +P+ K+ + +++ K KA+ + KA + DI R +DPQ+C +Y +DI QYL
Sbjct: 54 KAEPRKAKAKAKKALLTEKTKAKAKTKAT---EYADIDIDARSDDPQICGAYVTDIYQYL 110
Query: 206 RSMEAEPNRRPLPNYMESVQRDITAGMREVMVNWL 310
SME +P RRPLP+Y+E VQ+D++A MR V+V+WL
Sbjct: 111 HSMEVDPKRRPLPDYVEKVQKDVSANMRGVLVDWL 145
>gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]
Length = 382
Score = 83.6 bits (205), Expect = 3e-14
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 6/85 (7%)
Frame = +2
Query: 74 PRSKGKARTRKKAKLRP--ASSSDDIT----LREDPQMCTSYASDICQYLRSMEAEPNRR 235
PR K K + + K L P + +D+ ++PQMC +YA+DI +YLR ME EP RR
Sbjct: 56 PRGKTKPKRKAKRALEPPKVAKKEDVVDVDFTSDNPQMCGAYATDIYEYLRDMEVEPKRR 115
Query: 236 PLPNYMESVQRDITAGMREVMVNWL 310
PLP+Y+E VQ+D++A MR ++V+WL
Sbjct: 116 PLPDYIEKVQKDVSANMRGILVDWL 140
>ref|XP_003544479.1| PREDICTED: putative cyclin-A3-1-like isoform X1 [Glycine max]
Length = 364
Score = 83.6 bits (205), Expect = 3e-14
Identities = 34/72 (47%), Positives = 52/72 (72%)
Frame = +2
Query: 95 RTRKKAKLRPASSSDDITLREDPQMCTSYASDICQYLRSMEAEPNRRPLPNYMESVQRDI 274
+ +++ RP S+ + + R DPQ+C Y SDI +YLR ME +P++RPLP+Y++ VQRD+
Sbjct: 61 KVKREQPARPVSTPEKVEERHDPQLCGPYVSDIYEYLRGMEVDPSKRPLPDYVQKVQRDV 120
Query: 275 TAGMREVMVNWL 310
A MR V+V+WL
Sbjct: 121 NANMRGVLVDWL 132
>ref|XP_006601271.1| PREDICTED: putative cyclin-A3-1-like isoform X2 [Glycine max]
Length = 405
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/90 (44%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Frame = +2
Query: 53 SYSDRSVPRSKGKARTRKKAKLR----PASSSDDITLREDPQMCTSYASDICQYLRSMEA 220
S SD +V SK +T K KL P ++ + + R DPQ+C Y SDI +YLR ME
Sbjct: 46 SSSDVAVSVSKKPVQTHKNVKLEKPAAPVATPEKVEERHDPQLCGPYVSDIYEYLRGMEV 105
Query: 221 EPNRRPLPNYMESVQRDITAGMREVMVNWL 310
+P++RPL +Y++ +QRD+ A MR V+V+WL
Sbjct: 106 DPSKRPLMDYVQKIQRDVNANMRGVLVDWL 135
>ref|XP_003550316.1| PREDICTED: putative cyclin-A3-1-like isoform X1 [Glycine max]
Length = 367
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/90 (44%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Frame = +2
Query: 53 SYSDRSVPRSKGKARTRKKAKLR----PASSSDDITLREDPQMCTSYASDICQYLRSMEA 220
S SD +V SK +T K KL P ++ + + R DPQ+C Y SDI +YLR ME
Sbjct: 46 SSSDVAVSVSKKPVQTHKNVKLEKPAAPVATPEKVEERHDPQLCGPYVSDIYEYLRGMEV 105
Query: 221 EPNRRPLPNYMESVQRDITAGMREVMVNWL 310
+P++RPL +Y++ +QRD+ A MR V+V+WL
Sbjct: 106 DPSKRPLMDYVQKIQRDVNANMRGVLVDWL 135
>gb|EXC04823.1| Putative cyclin-A3-1 [Morus notabilis]
Length = 396
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Frame = +2
Query: 92 ARTRKKAKLRPASSSDDI----TLREDPQMCTSYASDICQYLRSMEAEPNRRPLPNYMES 259
A+T+K K S SD+ T +DPQMC Y SDI +YL MEAE RRPLP+Y+E
Sbjct: 64 AKTKKVKKAVSKSDSDEKPHVHTTSDDPQMCGPYVSDIYEYLHKMEAETKRRPLPDYLEK 123
Query: 260 VQRDITAGMREVMVNWL 310
VQ+D+TA MR V+V+WL
Sbjct: 124 VQKDVTANMRGVLVDWL 140
>ref|XP_004290941.1| PREDICTED: putative cyclin-A3-1-like [Fragaria vesca subsp. vesca]
Length = 365
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/93 (44%), Positives = 57/93 (61%)
Frame = +2
Query: 32 VDPQMCKSYSDRSVPRSKGKARTRKKAKLRPASSSDDITLREDPQMCTSYASDICQYLRS 211
V+PQ K + +S+ + R +L P + + T DPQMC YA DI +YL
Sbjct: 51 VEPQKRKCST-----KSRAAKKPRPIPELAPPKTEEVETTPSDPQMCEPYARDIYEYLHK 105
Query: 212 MEAEPNRRPLPNYMESVQRDITAGMREVMVNWL 310
+E +PNRRPLP+Y+ VQ+DITA MR V+V+WL
Sbjct: 106 LEVDPNRRPLPDYIAKVQKDITANMRGVLVDWL 138
>ref|XP_002301157.1| cyclin A3.1 family protein [Populus trichocarpa]
gi|222842883|gb|EEE80430.1| cyclin A3.1 family protein
[Populus trichocarpa]
Length = 360
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/100 (41%), Positives = 63/100 (63%)
Frame = +2
Query: 11 SDEITPRVDPQMCKSYSDRSVPRSKGKARTRKKAKLRPASSSDDITLREDPQMCTSYASD 190
S+ I +PQ K+ ++ P+++ A T+K+ L+ + EDPQMC YASD
Sbjct: 43 SNAIVSSNEPQKQKA---KAKPKARKGASTKKEGVLKEDVDGNP----EDPQMCAPYASD 95
Query: 191 ICQYLRSMEAEPNRRPLPNYMESVQRDITAGMREVMVNWL 310
I +YL ME +P RRPLP+Y+E VQ+D++ MR ++V+WL
Sbjct: 96 IYEYLHKMEVDPKRRPLPDYIEKVQKDVSPNMRGILVDWL 135
>ref|XP_002891340.1| CYCA3_4 [Arabidopsis lyrata subsp. lyrata]
gi|297337182|gb|EFH67599.1| CYCA3_4 [Arabidopsis lyrata
subsp. lyrata]
Length = 373
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +2
Query: 50 KSYSDRSVPRSKGKARTRKK----AKLRPASSSDDITLREDPQMCTSYASDICQYLRSME 217
K +R ++K T KK A + P S D + DPQMC +ASDIC YLR ME
Sbjct: 51 KPNQEREALKAKTSVNTSKKQMKKALMIPEPSVDIESRSVDPQMCEPFASDICSYLREME 110
Query: 218 AEPNRRPLPNYMESVQRDITAGMREVMVNWL 310
+P RPLP+Y+E VQ D+T MR V+V+WL
Sbjct: 111 GKPKHRPLPDYIEKVQSDLTPHMRAVLVDWL 141
>ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform 1 [Vitis vinifera]
gi|302142243|emb|CBI19446.3| unnamed protein product
[Vitis vinifera]
Length = 365
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Frame = +2
Query: 68 SVPRS---KGKARTRKKAKLRPASSSDDITLR-EDPQMCTSYASDICQYLRSMEAEPNRR 235
+VP S K K R +KK K++ A + D+ + +DPQMC YA+DI +YL SME EP RR
Sbjct: 54 AVPASGAQKQKFRPKKKEKVKAAVVAPDVGAKSDDPQMCGPYATDIYEYLHSMEMEPKRR 113
Query: 236 PLPNYMESVQRDITAGMREVMVNWL 310
PL +Y+E VQ+D++ MR ++V+WL
Sbjct: 114 PLHDYIEKVQKDVSHNMRGILVDWL 138
>emb|CAN76718.1| hypothetical protein VITISV_010485 [Vitis vinifera]
Length = 353
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Frame = +2
Query: 68 SVPRS---KGKARTRKKAKLRPASSSDDITLR-EDPQMCTSYASDICQYLRSMEAEPNRR 235
+VP S K K R +KK K++ A + D+ + +DPQMC YA+DI +YL SME EP RR
Sbjct: 54 AVPASGAQKQKFRXKKKEKVKAAVVAPDVGAKSDDPQMCGPYATDIYEYLHSMEMEPKRR 113
Query: 236 PLPNYMESVQRDITAGMREVMVNWL 310
PL +Y+E VQ+D++ MR ++V+WL
Sbjct: 114 PLHDYIEKVQKDVSHNMRGILVDWL 138
>gb|EMJ28826.1| hypothetical protein PRUPE_ppa024921mg [Prunus persica]
Length = 368
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/100 (40%), Positives = 60/100 (60%)
Frame = +2
Query: 11 SDEITPRVDPQMCKSYSDRSVPRSKGKARTRKKAKLRPASSSDDITLREDPQMCTSYASD 190
S + P+V + K+ + +++P K + T + D + +DPQMC YA D
Sbjct: 52 SSAVEPQVQKRGAKAKAKKALPEKKTETPT----------TPDIDSTSDDPQMCGPYARD 101
Query: 191 ICQYLRSMEAEPNRRPLPNYMESVQRDITAGMREVMVNWL 310
I YL +EA+P+RRPLP+YM VQRDIT+ MR ++V+WL
Sbjct: 102 IYDYLHKLEADPDRRPLPDYMTKVQRDITSNMRGILVDWL 141
>gb|EMJ25522.1| hypothetical protein PRUPE_ppa020376mg [Prunus persica]
Length = 363
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/87 (50%), Positives = 51/87 (58%)
Frame = +2
Query: 50 KSYSDRSVPRSKGKARTRKKAKLRPASSSDDITLREDPQMCTSYASDICQYLRSMEAEPN 229
KSY + P K +K R DI EDPQ+C YASDI YLR ME EP
Sbjct: 59 KSYGELQKPNCAIKKEEKKAVATR------DI---EDPQLCGPYASDIYAYLRRMEVEPK 109
Query: 230 RRPLPNYMESVQRDITAGMREVMVNWL 310
RRPLP+YME VQ+D A MR V+V+WL
Sbjct: 110 RRPLPDYMEKVQKDANANMRAVLVDWL 136
>gb|EXC04822.1| hypothetical protein L484_010245 [Morus notabilis]
Length = 359
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +2
Query: 50 KSYSDRSVPRSKGKARTRKKAKLRPASSSDDITLREDPQMCTSYASDICQYLRSMEAEPN 229
KS + +++P +K TR++ K A S EDPQMC Y SD+ +YL +E +P+
Sbjct: 96 KSKAKKALPMTK-TVTTRQETKETEAKS-------EDPQMCVPYVSDVYEYLHQIEVDPD 147
Query: 230 RRPLPNYMESVQRDITAGMREVMVNWL 310
RRPLP+YME VQ DIT MR ++++WL
Sbjct: 148 RRPLPDYMEKVQNDITPSMRGILIDWL 174
>ref|XP_006362078.1| PREDICTED: cyclin-A3-2-like [Solanum tuberosum]
Length = 368
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Frame = +2
Query: 74 PRSKGKAR---TRKKAKLRPASSSDDITLREDPQMCTSYASDICQYLRSMEAEPNRRPLP 244
P+SK K + T K + S+ DD +DPQMCT+Y SDI YLR ME + RRPLP
Sbjct: 61 PKSKKKVKRVVTCKTVDEKEVSAIDDDV--DDPQMCTTYVSDIYDYLRKMEIDEKRRPLP 118
Query: 245 NYMESVQRDITAGMREVMVNWL 310
+Y+E VQ+D++A MR ++V+WL
Sbjct: 119 DYLEKVQKDVSATMRGILVDWL 140
>ref|XP_006393614.1| hypothetical protein EUTSA_v10011590mg [Eutrema salsugineum]
gi|557090192|gb|ESQ30900.1| hypothetical protein
EUTSA_v10011590mg [Eutrema salsugineum]
Length = 366
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 5/87 (5%)
Frame = +2
Query: 65 RSVPRSK----GKARTRKKAKLRPASSSDDITLR-EDPQMCTSYASDICQYLRSMEAEPN 229
R +P+ + A+ RK A + A+ DI R +DP+MC Y +DI +YLR ME +P
Sbjct: 53 REIPKPRKSIGAPAKQRKSAPVALAAVDSDIDSRSDDPKMCGPYVTDIYEYLREMEVKPK 112
Query: 230 RRPLPNYMESVQRDITAGMREVMVNWL 310
+RPLP+Y+E VQ+D+T MR V+V+WL
Sbjct: 113 QRPLPDYIEKVQKDVTPSMRGVLVDWL 139
>ref|XP_003578446.1| PREDICTED: cyclin-A3-2-like [Brachypodium distachyon]
Length = 381
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = +2
Query: 110 AKLRPASSSDDITLREDPQMCTSYASDICQYLRSMEAEPNRRPLPNYMESVQRDITAGMR 289
A P ++S++ + DPQ+C +YASDI YLRSME EP RRP NY+E+VQ D+TA MR
Sbjct: 89 APTTPPAASEEASGGGDPQLCGTYASDIYTYLRSMEVEPARRPAANYIETVQTDVTANMR 148
Query: 290 EVMVNWL 310
++V+WL
Sbjct: 149 SILVDWL 155